CsaV3_UNG066550 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG066550
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionmyb-like transcription factor family protein
Locationscaffold72 : 184252 .. 184491 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAAATGTTTTTAAAGGATGAATTATTGTTTGTTTTAGGGGTTCCATGGACAGAAGAAGAGCATAGAAAATTTCTAATTGGACTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGAATTTCGAAGAACTACGTAACCACTAGAACTCCAACGCAAGTCGCTAGTCATGCTCAAAAGTATTTCCTTAGACAGTCTACTCTCAACAAAAAGAATAGACGCTCTAGTCTCTTTGACATG

mRNA sequence

ATGATTAAAATGTTTTTAAAGGATGAATTATTGTTTGTTTTAGGGGTTCCATGGACAGAAGAAGAGCATAGAAAATTTCTAATTGGACTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGAATTTCGAAGAACTACGTAACCACTAGAACTCCAACGCAAGTCGCTAGTCATGCTCAAAAGTATTTCCTTAGACAGTCTACTCTCAACAAAAAGAATAGACGCTCTAGTCTCTTTGACATG

Coding sequence (CDS)

ATGATTAAAATGTTTTTAAAGGATGAATTATTGTTTGTTTTAGGGGTTCCATGGACAGAAGAAGAGCATAGAAAATTTCTAATTGGACTTGAAAAGCTTGGAAGAGGAGATTGGAGAGGAATTTCGAAGAACTACGTAACCACTAGAACTCCAACGCAAGTCGCTAGTCATGCTCAAAAGTATTTCCTTAGACAGTCTACTCTCAACAAAAAGAATAGACGCTCTAGTCTCTTTGACATG

Protein sequence

MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRRSSLFDM
Homology
[Close]
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match: KGN66224.1 (hypothetical protein Csa_1G586860 [Cucumis sativus])

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK 60
          MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK
Sbjct: 1  MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK 60

Query: 61 YFLRQSTLNKKNRRSSLFDM 81
          YFLRQSTLNKKNRRSSLFDM
Sbjct: 61 YFLRQSTLNKKNRRSSLFDM 80

[Close]
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match: XP_011659976.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 4.0e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR
Sbjct: 132 GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 191

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 192 SSLFDM 197

[Close]
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match: XP_008450841.1 (PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 isoform X1 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 8.9e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLGRGDWRGIS+NYVTTRTPTQVASHAQKYFLRQSTLNKKNRR
Sbjct: 134 GVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 193

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 194 SSLFDM 199

[Close]
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match: XP_008450842.1 (PREDICTED: transcription factor MYB1R1-like isoform X2 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 8.9e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLGRGDWRGIS+NYVTTRTPTQVASHAQKYFLRQSTLNKKNRR
Sbjct: 134 GVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 193

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 194 SSLFDM 199

[Close]
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match: XP_022147581.1 (myb-like protein J [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHR FLIGLEKLGRGDWRGIS+NYVTTRTPTQVASHAQKYFLRQST+NKKNRR
Sbjct: 123 GVPWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKYFLRQSTINKKNRR 182

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 183 SSLFDM 188

[Close]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match: AT5G47390.1 (myb-like transcription factor family protein)

HSP 1 Score: 121.3 bits (303), Expect = 2.7e-28
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           G PWTEEEHR FL+GL+KLG+GDWRGIS+NYVTTRTPTQVASHAQKYF+RQS ++++ RR
Sbjct: 95  GTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRR 154

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 155 SSLFDM 160

[Close]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match: AT3G16350.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-27
Identity = 51/66 (77.27%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHR FL+GL+KLG+GDWRGIS+NYVT+RTPTQVASHAQKYF+R ++ +++ RR
Sbjct: 136 GVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSRRKRR 195

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 196 SSLFDM 201

[Close]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match: AT1G19000.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 5.6e-26
Identity = 48/66 (72.73%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTE EH++FLIGL+K+G+GDW+GIS+N+V +RTPTQVASHAQKYFLR++ LN++ RR
Sbjct: 101 GVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRRR 160

Query: 75  SSLFDM 81
           SSLFD+
Sbjct: 161 SSLFDI 166

[Close]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match: AT1G74840.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 113.2 bits (282), Expect = 7.3e-26
Identity = 49/66 (74.24%), Postives = 61/66 (92.42%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEH+ FL+GL+++G+GDW+GIS+N+V TRT TQVASHAQKYFLR+S LN++ RR
Sbjct: 95  GVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRR 154

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 155 SSLFDM 160

[Close]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match: AT5G56840.1 (myb-like transcription factor family protein)

HSP 1 Score: 113.2 bits (282), Expect = 7.3e-26
Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQ-STLNKKNR 74
           GVPWT EEHR FLIGLEKLG+GDWRGIS+N+V T++PTQVASHAQKYFLRQ +TL+ K R
Sbjct: 90  GVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLHHKRR 149

Query: 75  RSSLFDM 81
           R+SLFDM
Sbjct: 150 RTSLFDM 156

[Close]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match: sp|Q9LVS0|KUA1_ARATH (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 4.8e-27
Identity = 53/66 (80.30%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           G PWTEEEHR FL+GL+KLG+GDWRGIS+NYVTTRTPTQVASHAQKYF+RQS ++++ RR
Sbjct: 95  GTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRR 154

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 155 SSLFDM 160

[Close]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match: sp|Q7XC57|MYBS3_ORYSJ (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.4e-26
Identity = 51/66 (77.27%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHR+FL+GL+KLG+GDWRGIS+N+V +RTPTQVASHAQKYF+RQS + ++ RR
Sbjct: 93  GVPWTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRKRR 152

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 153 SSLFDM 158

[Close]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match: sp|Q2V9B0|MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 9.1e-26
Identity = 51/66 (77.27%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEH+ FL+GL+K+G+GDWRGIS+N+V TRTPTQVASHAQKYFLR+S LN++ RR
Sbjct: 94  GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRR 153

Query: 75  SSLFDM 81
           SSLFD+
Sbjct: 154 SSLFDI 159

[Close]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match: sp|B8BI93|MYBS2_ORYSI (Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-23
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 16  VPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRRS 75
           VPWTEEEH+KFL GL +LG+GDWRGISKN+VT+RT TQVASHAQKYFLRQ+   KK RR+
Sbjct: 99  VPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPGKKKRRA 158

Query: 76  SLFDM 81
           SLFD+
Sbjct: 159 SLFDV 163

[Close]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match: sp|Q7XC51|MYBS2_ORYSJ (Transcription factor MYBS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS2 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.9e-23
Identity = 50/65 (76.92%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 16  VPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRRS 75
           VPWTEEEH+KFL GL +LG+GDWRGISKN+VT+RT TQVASHAQKYFLRQ+   KK RR+
Sbjct: 99  VPWTEEEHKKFLEGLRQLGKGDWRGISKNFVTSRTATQVASHAQKYFLRQTNPGKKKRRA 158

Query: 76  SLFDM 81
           SLFD+
Sbjct: 159 SLFDV 163

[Close]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match: tr|A0A0A0LYT9|A0A0A0LYT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586860 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-37
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 1  MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK 60
          MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK
Sbjct: 1  MIKMFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQK 60

Query: 61 YFLRQSTLNKKNRRSSLFDM 81
          YFLRQSTLNKKNRRSSLFDM
Sbjct: 61 YFLRQSTLNKKNRRSSLFDM 80

[Close]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match: tr|A0A1S3BR73|A0A1S3BR73_CUCME (probable serine/threonine-protein kinase DDB_G0282963 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492310 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLGRGDWRGIS+NYVTTRTPTQVASHAQKYFLRQSTLNKKNRR
Sbjct: 134 GVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 193

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 194 SSLFDM 199

[Close]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match: tr|A0A1S3BPK2|A0A1S3BPK2_CUCME (transcription factor MYB1R1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492310 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-30
Identity = 65/66 (98.48%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLGRGDWRGIS+NYVTTRTPTQVASHAQKYFLRQSTLNKKNRR
Sbjct: 134 GVPWTEEEHRKFLIGLEKLGRGDWRGISRNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 193

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 194 SSLFDM 199

[Close]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match: tr|M0ZHJ0|M0ZHJ0_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102587181 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.2e-28
Identity = 64/77 (83.12%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 4  MFLKDELLFVLGVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFL 63
          MF+ DE    LGVPWTEEEHR+FL GLEKLG+GDWRGIS+N+VTTRTPTQVASHAQKYFL
Sbjct: 1  MFILDE----LGVPWTEEEHRRFLNGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFL 60

Query: 64 RQSTLNKKNRRSSLFDM 81
          RQS+LNKK RRSSLFDM
Sbjct: 61 RQSSLNKKKRRSSLFDM 73

[Close]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match: tr|A0A1S4BSF4|A0A1S4BSF4_TOBAC (myb-like protein J OS=Nicotiana tabacum OX=4097 GN=LOC107811409 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.5e-28
Identity = 61/66 (92.42%), Postives = 65/66 (98.48%), Query Frame = 0 

Query: 15  GVPWTEEEHRKFLIGLEKLGRGDWRGISKNYVTTRTPTQVASHAQKYFLRQSTLNKKNRR 74
           GVPWTEEEHRKFLIGLEKLG+GDWRGIS+N+VTTRTPTQVASHAQKYFLRQS+LNKK RR
Sbjct: 99  GVPWTEEEHRKFLIGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQSSLNKKKRR 158

Query: 75  SSLFDM 81
           SSLFDM
Sbjct: 159 SSLFDM 164

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG066550 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66224.11.5e-37100.00hypothetical protein Csa_1G586860 [Cucumis sativus][more]
XP_011659976.14.0e-30100.00PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis sativus][more]
XP_008450841.18.9e-3098.48PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 isoform X1 [Cuc... [more]
XP_008450842.18.9e-3098.48PREDICTED: transcription factor MYB1R1-like isoform X2 [Cucumis melo][more]
XP_022147581.11.3e-2895.45myb-like protein J [Momordica charantia][more]
BLAST of CsaV3_UNG066550 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47390.12.7e-2880.30myb-like transcription factor family protein[more]
AT3G16350.13.9e-2777.27Homeodomain-like superfamily protein[more]
AT1G19000.15.6e-2672.73Homeodomain-like superfamily protein[more]
AT1G74840.17.3e-2674.24Homeodomain-like superfamily protein[more]
AT5G56840.17.3e-2679.10myb-like transcription factor family protein[more]
BLAST of CsaV3_UNG066550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVS0|KUA1_ARATH4.8e-2780.30Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1[more]
sp|Q7XC57|MYBS3_ORYSJ2.4e-2677.27Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=... [more]
sp|Q2V9B0|MY1R1_SOLTU9.1e-2677.27Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
sp|B8BI93|MYBS2_ORYSI1.9e-2376.92Transcription factor MYBS2 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS2 PE=3 ... [more]
sp|Q7XC51|MYBS2_ORYSJ1.9e-2376.92Transcription factor MYBS2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS2 PE=... [more]
BLAST of CsaV3_UNG066550 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYT9|A0A0A0LYT9_CUCSA1.0e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586860 PE=4 SV=1[more]
tr|A0A1S3BR73|A0A1S3BR73_CUCME5.9e-3098.48probable serine/threonine-protein kinase DDB_G0282963 isoform X1 OS=Cucumis melo... [more]
tr|A0A1S3BPK2|A0A1S3BPK2_CUCME5.9e-3098.48transcription factor MYB1R1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492... [more]
tr|M0ZHJ0|M0ZHJ0_SOLTU4.2e-2883.12Uncharacterized protein OS=Solanum tuberosum OX=4113 GN=102587181 PE=4 SV=1[more]
tr|A0A1S4BSF4|A0A1S4BSF4_TOBAC5.5e-2892.42myb-like protein J OS=Nicotiana tabacum OX=4097 GN=LOC107811409 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR006447Myb_dom_plants
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG066550.1CsaV3_UNG066550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 14..64
e-value: 1.3E-8
score: 44.7
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 17..61
e-value: 3.0E-12
score: 46.4
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 17..62
e-value: 8.35631E-9
score: 46.0294
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 16..65
e-value: 1.1E-18
score: 65.3
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 16..69
e-value: 4.8E-19
score: 70.2
NoneNo IPR availablePANTHERPTHR44377FAMILY NOT NAMEDcoord: 15..80
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 10..66
score: 16.518
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 16..66

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG066550CSPI01G27990Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG066550Cucsa.397260Cucumber (Gy14) v1cgycucB602
CsaV3_UNG066550Cp4.1LG18g03730Cucurbita pepo (Zucchini)cpecucB0462
CsaV3_UNG066550CsGy1G027240Cucumber (Gy14) v2cgybcucB036
CsaV3_UNG066550Carg13006Silver-seed gourdcarcucB0112
CsaV3_UNG066550MELO3C015456Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG066550ClCG03G015720Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG066550MELO3C015456.2Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG066550Cla97C03G066000Watermelon (97103) v2cucwmbB350
CsaV3_UNG066550Bhi02G001579Wax gourdcucwgoB441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG066550CsaV3_1G040280Cucumber (Chinese Long) v3cuccucB033
The following block(s) are covering this gene:

None