CsaV3_UNG055460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG055460
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptiondolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
Locationscaffold92 : 95873 .. 100379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAGAAACCTAGTTCCATTTCTGGTGCTACTTTTTTGGATTTCGATCTGCCAAGCTGCAAACATTTTTCAGCCGATCTCAGATTCACATAGATATGCGGCTCTAGAGCTCTTCAGGCCTACTGACGGAGTATTTGGAAGGTACTACTATTAGACGCTTTTTACTTGAGGAGTTTTTGTGTTTATTTTCTTTTCGCCTCCCTCGGTTAGATAGATTTAGTGCATTAAAAGGTGGCAGTCAAATTTTTGGACTAATCATGAGTGAGAAGGTTCGTCATCAATTCTAAAATAGTTATGGGAAAACGCCCATTTGATTAATGGTACTAATATCCCCCTTTTTGCCTTCTGATCTGGAAATTGTTTTTCTTTTTAATATAAATTATCTTGTCAAACTAAGTTTTTACATCAACTACTTTCATGATAGCATTGGGAAGGAGGTTTCATTTGTGATTCCATTCACAAGCCTTTCTGAAAGAACTAATTTGACCTCTTAAGGTCTTAATTTAGGGATTCTAACAAACTTTAAGTAAGTGAAAACCATTTGGCTTGAGATTTTCACTCTCATAACTCAAATAACATGTATTTTCTTTAAATTGATTGGCCTCCTGCAACAACCTTAACGTGGAAATTGGAAACCATGGGTAGAGGGAAGAAGAAACATTTAAGAGAACATTAATTTGGGCGTAATAAACATTTCATTGATGAATGAAATAATTTAAGGAAAATATGAAGGAGATACACTGAAAAACAGAAGAAGCCCAAATGTGAGAGAACAATTACATCTAAAAAAGAACAAAAGAACAAGAGAAGAAAAGATGAAAATGTACAACTGAATATTTTGGATAAAAACAATAAAGCAGTGGCCCAAAACAAAAGCAGTGAGGAACTAAAAAACGTAGAGTGAGAGGAAGACTGATTTTTTCAATTGAAACTTGTTCCTATGCATCTGATATTTGAAATAGGTTACAACAGATAATACAATCTGGAACATAGTGGCATATTGTTCTCTAAAAATTTATCATGCATTGGTGATATTAACACATCAACTAAAACATATCAGTTTATACATGAGTATATTACCCGTGGTGTTAGTGGACGTGAGGACCAATTGATTGTCCATATATTGACCTATGTGGTAATGCATCGGTGTATCTATGGAGGGGAGGCTTAATTTGATTATGCTTATCCGTAGAATTTGACTTCATCAGAGTGGCACCTTTGTGTTACCTTTTAAGCGTATGGTGTTGCTATGTTCCAACCCTTTGGTTCATAATATACACGAGTATATTTGAATGTATTCACATTCTATGTTCATTTCATTTTAAAAACTAACAAAATTAATTGATAAACTAAGATAAAATATAAAACACTTATGAGATTGTTGATTAAATAATTATAGATTCTAACGAACAATGCGTTTTGAAATCTCAAATAGTTATTGTTCTATTTTTGTTGCAGAATACTACTTTTGAACTGGTGGTTTTTGGTTTTACTTTTGTTTTTGCATGAGCTACTAAGCCTGCTATTATTGTGTGCGGTCTCTCATTACGCCCTTGTTTCTTTTTCTTTGTTTTTTAAAATTTCTATCAGTTTGGAAGAGACACATGAAGCATTAAAACATTTGACATTCTTGGAATTCAAGAGAAACCTGATATTAATGCTGCCACTTGCAAGTCTGTATCAGAGGTTCTTGGTTCATCTGCAGTCCTAAAGGATCTGTTTTATGCTCTGAGAGTCAACGATGTTTTGAAATGTGACATTAAGGAGGAGACATTTGAGGTATTCTTATACTCGCAGGTGTTTCAATTTCTAAGACTTGAGCTTTGTGTCAGATCTTTTTTACTTGCTACTTTGAAAATTAATTCTTAAAACATTTTCAATATAACATTTTGTAGAAGTTTTGTTTATTTATTGAGGTGGCATAGTAACAAAACTTGTATTATCGACAAAAGCTACAGAAGAAGGATGGTATAACCCCACTAAGCATAGGGGATTACCAAAAAGGACTCCCAATGACAACTGATGCAAATATGCATCATATCATGATTAAAAATATTGTTTTTTACAAAGATTGCTGAGTGACAAAAACAGGTTAGCTGAATCCTAAAAAGCATCAAAACAAGCCATATCTGCTTGAACACTCTTTAGTTTCTTTGAATTCAAAGCCTCCAATTATGGGATGCCATTGAATTAGACCATGGAGTTCTAGTATGCCCTTTAAAACCGGAATAACAAGAACTTGATGCAGAGCTTCAAGGCCTGCTAGGGAAGCACCACATCACATTGGAATAAGTGGGCTTGATCCTCTAAATTTGATTTGCACAGAAGACACCAGTTGGAAAATGAAGGTGTAGTGAAACATTATTTGGATCATGCAAGTTTGCAACCAGTATTCAGTTTTTTGAAGGAAGAATGTAAAAGAAATCCTTCATCTTTCTAGGCTTTAGCTTTCCGAATCAAACAAGGTGACTGAGAATGACATATTTTTCTCATTTTTCGTGGGCAATACCAAGAAAAAACACATGAAAATGGCTAAGTACTTGCATTCTTTTCTACCTTTTTGTTATAAAACCCATCCTATATTTTAGGCCAAGGAATTATTTATTGTTCTTTTCTATCTCTATGCATGACTTCCAAACAACTCTTATGTCATTGGTTGTGATCCATGTTCATGATGTGATTTTTTCTTTTGATTTTGTGAAGAGCATTACTTAAGACTTACAACTGCTCTAAATGATGCGCGATCACTGTTTGACTTCTACTACTCTATAGGAAGTTTGTTACTTCTGAAGGTAACATGACAACACATTGCATTTCTTCTTATTTTTTATGATGATTTAAAATTCAAATATGAACTGTTTAAAGTTCTTATTACCCAATGAATGATGTGATGAGAAGACTTGCAAATTCTTACAGGTGTATATCCTTAATTCCATTTTGATCTTTGGATTTAGTAATTTTCTTTCATTATTTGCAGGAACGAAGTTCTGGAATTGATCTATCACTTAATGACGCTGATGGTACTTTTCAGTCGATCAAGGTTAGTTTATGTTAGTTTTCAGCATTGGAGAAATGGAATTATATATAGGCTAGGAATAGAAAGTCGAAAAATCTAGTTTCCATTTGGGGCTTACATTTTGCTTTTCCTTATATTGATGAGAAGTTGTTTTGAACTAAAAATAATAATTAAAACTGCATCAAGCTCTGTAGATTAGATTAAATATCATCTAGAAATCATATGTAGATATTTTACCTTATCCCATTTTTTTACTATTAACTGTATTGTGCTTACCGAAAGTATCCATATTGTTTACCCTTCAGTCTACTTCGTGCATAATTTGCAGGCATTGAGCCAAAGTGATGGAAGGTGGCGGTATAGTTCTAATAATCCTGAGTCTAGTACTTATGCTGCTGGTACTAATTCGTCCATAATTCTTCACCTATCATAATTAAAAAATTTCTTTTGACATTCTTGTTGTATGCTATTGTAAATAGTGATATAACTCTTTAATGCAACAGTGAAGCTTCTTAGTTTTCTCATTGTATTAGGATAACCGAAAGACAAAAGCATAATTTCTCTTCTTATCCATATTTTAAAAAATATTACTTGTCATCTTAGTTGCCATTTTAACTTAGACGGTTAGATGGAGTTTAAGAAAATAATCATTCTAGAAATGACTGTGTACTTTAATGTGTGTTTGGGGTAGTGATGAAAATCCTATGTGAAGTTAGTTGCAAAGGAAATAGTTACATTTTCATGACTAGGCAGTAGTACGCAATACCTTTCTCCCATGAAGTTTAATCTTAAACATTATTATAATTTACAAGCGTCAACACTAATGAATTTGACAACAAGAACCATTTCTCTTTTCTTAATTGCTAAACAAGTGGGAGGTGTAATTGTTTATCACTTACCATGACTGAGCTTTTTTGGAGGTATGCATGTATTTAGGCTAGTATTTTTAAAATTGTATTCCTATCCAAATTTGCAACTTGTATGAAAATTTAGAATCTCTCTCTCAAGGAAGTTCCTTGCTTCTTTCTGAAAATTTTAAAATAATTTATTAAATTCCAGAAATTTGTGAAAGTGAGATTTGTGTGGAACTTAGATTATGAATAATTGTACATTCTTTTTATATCATGCCTGGTTATCATTTTAAGTGATAAGTTAAAAATTTTCAGTTGCTTGATACTTCGTTGCCTTGTATTGTATTTGTTGTTTGTTATTTGCTTTTGTTCTTGTTTTTTGTTTTTTGTTTGGTTTTATTCTTTTATTTGAGTCTAGATGGCTTAAACTTTGTAGCTTAAGCCATATGCTTTTATTAGCACTTGAATAAAATATAACTTTGTTATTTACGCTATATAACTCTATAGGATTGGCACTTGAATCCCTTGCTGGTGTTGTGTCATTAGATCATCGGACATTGATCAAATATGGTACTCTCACCTCTTCTTTTCTGTCATATTGCTGTTTAGCTCTGAAATCTTACGTTCCTTTCTTGTGA

mRNA sequence

ATGGCTAGAAACCTAGTTCCATTTCTGGTGCTACTTTTTTGGATTTCGATCTGCCAAGCTGCAAACATTTTTCAGCCGATCTCAGATTCACATAGATATGCGGCTCTAGAGCTCTTCAGGCCTACTGACGGAGTATTTGGAAGCATTAAAACATTTGACATTCTTGGAATTCAAGAGAAACCTGATATTAATGCTGCCACTTGCAAGTCTGTATCAGAGGTTCTTGGTTCATCTGCAGTCCTAAAGGATCTGTTTTATGCTCTGAGAGTCAACGATGTTTTGAAATGTGACATTAAGGAGGAGACATTTGAGGAACGAAGTTCTGGAATTGATCTATCACTTAATGACGCTGATGGTACTTTTCAGTCGATCAAGGCATTGAGCCAAAGTGATGGAAGGTGGCGGTATAGTTCTAATAATCCTGAGTCTAGTACTTATGCTGCTGGATTGGCACTTGAATCCCTTGCTGGTGTTGTGTCATTAGATCATCGGACATTGATCAAATATGGTACTCTCACCTCTTCTTTTCTGTCATATTGCTGTTTAGCTCTGAAATCTTACGTTCCTTTCTTGTGA

Coding sequence (CDS)

ATGGCTAGAAACCTAGTTCCATTTCTGGTGCTACTTTTTTGGATTTCGATCTGCCAAGCTGCAAACATTTTTCAGCCGATCTCAGATTCACATAGATATGCGGCTCTAGAGCTCTTCAGGCCTACTGACGGAGTATTTGGAAGCATTAAAACATTTGACATTCTTGGAATTCAAGAGAAACCTGATATTAATGCTGCCACTTGCAAGTCTGTATCAGAGGTTCTTGGTTCATCTGCAGTCCTAAAGGATCTGTTTTATGCTCTGAGAGTCAACGATGTTTTGAAATGTGACATTAAGGAGGAGACATTTGAGGAACGAAGTTCTGGAATTGATCTATCACTTAATGACGCTGATGGTACTTTTCAGTCGATCAAGGCATTGAGCCAAAGTGATGGAAGGTGGCGGTATAGTTCTAATAATCCTGAGTCTAGTACTTATGCTGCTGGATTGGCACTTGAATCCCTTGCTGGTGTTGTGTCATTAGATCATCGGACATTGATCAAATATGGTACTCTCACCTCTTCTTTTCTGTCATATTGCTGTTTAGCTCTGAAATCTTACGTTCCTTTCTTGTGA

Protein sequence

MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGSIKTFDILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFEERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPESSTYAAGLALESLAGVVSLDHRTLIKYGTLTSSFLSYCCLALKSYVPFL
Homology
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BLAST of CsaV3_UNG055460 vs. NCBI nr
Match: KGN65031.1 (hypothetical protein Csa_1G181440 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 8.9e-76
Identity = 160/198 (80.81%), Postives = 161/198 (81.31%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS       +KTFD
Sbjct: 91  MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGSLEETHEALKTFD 150

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE         
Sbjct: 151 ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFESITSRLTTA 210

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES
Sbjct: 211 LNDARSLFDFYYSIGSLLLLKERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 270

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BLAST of CsaV3_UNG055460 vs. NCBI nr
Match: XP_011654943.1 (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 8.9e-76
Identity = 160/198 (80.81%), Postives = 161/198 (81.31%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS       +KTFD
Sbjct: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGSLEETHEALKTFD 60

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE         
Sbjct: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFESITSRLTTA 120

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES
Sbjct: 121 LNDARSLFDFYYSIGSLLLLKERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 180

[Close]
BLAST of CsaV3_UNG055460 vs. NCBI nr
Match: XP_008463606.1 (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 150/198 (75.76%), Postives = 156/198 (78.79%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQA +IFQPISDSHRYAALELFRPTDGVFGS       ++TFD
Sbjct: 1   MARNLVPFLVLLFWISICQATSIFQPISDSHRYAALELFRPTDGVFGSLEETHEALRTFD 60

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEK +INAATCKSVSEVL SSAVLKDLFYALRVNDVLKCDIKEETFE         
Sbjct: 61  ILGIQEKLNINAATCKSVSEVLSSSAVLKDLFYALRVNDVLKCDIKEETFESVTSRLTTA 120

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ER S +DLSLNDADGTFQSIKALSQSDGRWRYSSNNPES
Sbjct: 121 LNDARSLFDFYYSIGSLLLLKERGSRVDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 180

[Close]
BLAST of CsaV3_UNG055460 vs. NCBI nr
Match: XP_023519527.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263.1 bits (671), Expect = 7.5e-67
Identity = 143/198 (72.22%), Postives = 153/198 (77.27%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQAA+IFQPISDSHR AALELFRPTDGVFGS       ++TFD
Sbjct: 1   MARNLVPFLVLLFWISICQAASIFQPISDSHRNAALELFRPTDGVFGSLEETHEALRTFD 60

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEKPDI+AATCKSVSE LGSSA LKDLFYALRVND LKC+IKEE +E         
Sbjct: 61  ILGIQEKPDISAATCKSVSEALGSSAALKDLFYALRVNDALKCEIKEEIYESITSRLRTV 120

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                E+SSG+DLSL DAD  FQSIKALSQSDGRWRYSSNNPES
Sbjct: 121 LNDARSLLDFYYSIGSLLHLKEQSSGVDLSLKDADVIFQSIKALSQSDGRWRYSSNNPES 180

[Close]
BLAST of CsaV3_UNG055460 vs. NCBI nr
Match: XP_022155085.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Momordica charantia])

HSP 1 Score: 236.1 bits (601), Expect = 9.8e-59
Identity = 131/198 (66.16%), Postives = 144/198 (72.73%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MA NLV FLVLL  +SICQAA +FQPISDSHRYAALELFRPT G FGS       ++TFD
Sbjct: 1   MAGNLVGFLVLLLVVSICQAATVFQPISDSHRYAALELFRPTYGAFGSLEETHEALRTFD 60

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGI+EKPDIN  TCKSVSEVLGSS VLKDL YAL+VN+ LKC+I+EE +E         
Sbjct: 61  ILGIKEKPDINTVTCKSVSEVLGSSEVLKDLLYALKVNNDLKCEIQEEIYESVTSRLRSV 120

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ERSS +DL+L DADG F SIKALSQSDGRWRYSSNNPES
Sbjct: 121 LNDARSLLDFYYSIGSLLLLKERSSEVDLTLKDADGIFHSIKALSQSDGRWRYSSNNPES 180

[Close]
BLAST of CsaV3_UNG055460 vs. TAIR10
Match: AT4G21150.1 (ribophorin II (RPN2) family protein)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-42
Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MA   V FLVL+  ++IC AA++FQPISDSHR AAL++F P DG + S       +KT +
Sbjct: 2   MAGGNVRFLVLILAVAICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYEALKTLE 61

Query: 61  ILGIQEKPDINAATCKSVSEVL-GSSAVLKDLFYALRVNDVLKCDIKEE----------- 120
           ILGI +K D+++ TC++V +VL  SS+ LKD FYAL VN +LKC I E            
Sbjct: 62  ILGIDKKSDLSSKTCENVVKVLQSSSSTLKDAFYALNVNGILKCKIGEAGPKDIVSQLQA 121

Query: 121 -------------------TFEERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPE 162
                                +E+  G  +SL DA+  F+SIK+LSQSDGRWRYSSNNPE
Sbjct: 122 GVKDAKLLLDFYYSVRGLVLAKEQFPGTHISLGDAEAIFRSIKSLSQSDGRWRYSSNNPE 181

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BLAST of CsaV3_UNG055460 vs. Swiss-Prot
Match: sp|Q93Z16|RPN2_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=RPN2 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MA   V FLVL+  ++IC AA++FQPISDSHR AAL++F P DG + S       +KT +
Sbjct: 2   MAGGNVRFLVLILAVAICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYEALKTLE 61

Query: 61  ILGIQEKPDINAATCKSVSEVL-GSSAVLKDLFYALRVNDVLKCDIKEE----------- 120
           ILGI +K D+++ TC++V +VL  SS+ LKD FYAL VN +LKC I E            
Sbjct: 62  ILGIDKKSDLSSKTCENVVKVLQSSSSTLKDAFYALNVNGILKCKIGEAGPKDIVSQLQA 121

Query: 121 -------------------TFEERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPE 162
                                +E+  G  +SL DA+  F+SIK+LSQSDGRWRYSSNNPE
Sbjct: 122 GVKDAKLLLDFYYSVRGLVLAKEQFPGTHISLGDAEAIFRSIKSLSQSDGRWRYSSNNPE 181

[Close]
BLAST of CsaV3_UNG055460 vs. Swiss-Prot
Match: sp|Q5N7W3|RPN2_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPN2 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-27
Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 0 

Query: 9   LVLLFWISICQAANIFQPISDSHRYAALELFRPT-DGVFG-------SIKTFDILGIQEK 68
           L+++  +++   A+  +P+SD+HR AA ELF  + DG FG       +++TF ILG+++ 
Sbjct: 15  LLVIAAVAVAPLASAVRPVSDAHRSAAAELFAASPDGSFGDLETTYEAVRTFQILGVEKD 74

Query: 69  PDINAATCKSVSEVL--GSSAVLKDLFYALRVNDVLKCDIKEETFEE------------- 128
             +    CK  +E L   SS+  KDLF+A R++ VLKC +    +++             
Sbjct: 75  KGLIGKACKFAAEKLASSSSSPAKDLFHAARISGVLKCSVDSGVYDDVATRLKAVIKDTN 134

Query: 129 ---------------RSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPESSTYAAGL 162
                          +  G ++ L DAD TF +IKALSQSDGRWRY +N+ ESST+AAG+
Sbjct: 135 SLLELYYSVGGLLSIKEQGHNVVLPDADNTFHAIKALSQSDGRWRYDTNSAESSTFAAGI 194

[Close]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match: tr|A0A0A0LYL0|A0A0A0LYL0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181440 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.9e-76
Identity = 160/198 (80.81%), Postives = 161/198 (81.31%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS       +KTFD
Sbjct: 91  MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGSLEETHEALKTFD 150

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE         
Sbjct: 151 ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFESITSRLTTA 210

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES
Sbjct: 211 LNDARSLFDFYYSIGSLLLLKERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 270

[Close]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match: tr|A0A1S3CL79|A0A1S3CL79_CUCME (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Cucumis melo OX=3656 GN=LOC103501715 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-70
Identity = 150/198 (75.76%), Postives = 156/198 (78.79%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLVPFLVLLFWISICQA +IFQPISDSHRYAALELFRPTDGVFGS       ++TFD
Sbjct: 1   MARNLVPFLVLLFWISICQATSIFQPISDSHRYAALELFRPTDGVFGSLEETHEALRTFD 60

Query: 61  ILGIQEKPDINAATCKSVSEVLGSSAVLKDLFYALRVNDVLKCDIKEETFE--------- 120
           ILGIQEK +INAATCKSVSEVL SSAVLKDLFYALRVNDVLKCDIKEETFE         
Sbjct: 61  ILGIQEKLNINAATCKSVSEVLSSSAVLKDLFYALRVNDVLKCDIKEETFESVTSRLTTA 120

Query: 121 ---------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 162
                                ER S +DLSLNDADGTFQSIKALSQSDGRWRYSSNNPES
Sbjct: 121 LNDARSLFDFYYSIGSLLLLKERGSRVDLSLNDADGTFQSIKALSQSDGRWRYSSNNPES 180

[Close]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match: tr|A0A2P4MHD1|A0A2P4MHD1_QUESU (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Quercus suber OX=58331 GN=CFP56_17209 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 115/199 (57.79%), Postives = 143/199 (71.86%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNL  FLVL   I+IC+AA+IFQPISDSHR AALELF PTDG FGS       ++TF+
Sbjct: 88  MARNLGGFLVLFLAIAICEAASIFQPISDSHRSAALELFSPTDGSFGSLEDTYEALRTFE 147

Query: 61  ILGIQEKPDINAATCKSVSEVLGSS-AVLKDLFYALRVNDVLKCDIKEETFE-------- 120
           ILGI+++PDI+ A+C+SVSE LGSS + LKD+F+AL+VN++LKC + +ETF+        
Sbjct: 148 ILGIKKRPDISTASCQSVSETLGSSTSSLKDVFHALKVNNILKCKVNDETFQGVAKRLKA 207

Query: 121 ----------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPE 162
                                 +++S +D+ L+DADG F SIKALSQSDGRWRYSSNNPE
Sbjct: 208 VLNDASSLLDFYYSIGSLVLIKDQNSEVDVLLHDADGVFHSIKALSQSDGRWRYSSNNPE 267

[Close]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match: tr|W9RFI4|W9RFI4_9ROSA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Morus notabilis OX=981085 GN=L484_005645 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.2e-48
Identity = 112/197 (56.85%), Postives = 140/197 (71.07%), Query Frame = 0 

Query: 3   RNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFDIL 62
           R L  FLVLL  I+IC+AA++FQPI+D+HR AALELF+PTDG FGS       +++F+IL
Sbjct: 4   RALGGFLVLLSVIAICEAASVFQPITDAHRSAALELFKPTDGSFGSLEEAYGALRSFEIL 63

Query: 63  GIQEKPDINAATCKSVSEVLGSSAVL-KDLFYALRVNDVLKCDIKEETFEE--------- 122
           GI +KPDI++ATC SV E LGSS+   KDLF+ALRVN +LKC++KE+ FE          
Sbjct: 64  GIDKKPDISSATCDSVLETLGSSSSSPKDLFHALRVNGILKCNVKEDAFESVVSRLKAAI 123

Query: 123 ---------------------RSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPESS 162
                                +SS +++ L+DADG F+SIKALSQSDGRWRYSSNNPESS
Sbjct: 124 SSASSLLEFYYSIGSLELIKGQSSNVNVLLSDADGIFRSIKALSQSDGRWRYSSNNPESS 183

[Close]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match: tr|A0A2I4F6K9|A0A2I4F6K9_9ROSI (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like OS=Juglans regia OX=51240 GN=LOC108996013 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.4e-47
Identity = 113/210 (53.81%), Postives = 140/210 (66.67%), Query Frame = 0 

Query: 1   MARNLVPFLVLLFWISICQAANIFQPISDSHRYAALELFRPTDGVFGS-------IKTFD 60
           MARNLV  LVL+  IS+C+AA+IFQPIS+SHR AALELF P DG FGS       ++TF 
Sbjct: 1   MARNLVGSLVLVLAISLCEAASIFQPISESHRSAALELFTPADGSFGSLEETYEALRTFG 60

Query: 61  ILGIQEKPDINAATCKSVSEVL-GSSAVLKDLFYALRVNDVLKCDIKEETFE-------- 120
           ILGIQ+KPDI   +C+SVSE L  SS+  KDLF+AL+VN +L+C I E  F+        
Sbjct: 61  ILGIQKKPDIGTGSCQSVSETLESSSSTTKDLFFALKVNSILECKIDEAIFQDITSRLKA 120

Query: 121 ----------------------ERSSGIDLSLNDADGTFQSIKALSQSDGRWRYSSNNPE 168
                                 +++S +D+ L DADG F+SIKALSQSDGRWRYSS+NPE
Sbjct: 121 VVNDGNSLLDFYYSISSLVLIKDQNSRVDVLLGDADGIFRSIKALSQSDGRWRYSSSNPE 180

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG055460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65031.18.9e-7680.81hypothetical protein Csa_1G181440 [Cucumis sativus][more]
XP_011654943.18.9e-7680.81PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
XP_008463606.12.5e-7075.76PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subuni... [more]
XP_023519527.17.5e-6772.22dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like [C... [more]
XP_022155085.19.8e-5966.16dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 [Momord... [more]
BLAST of CsaV3_UNG055460 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G21150.16.0e-4249.25ribophorin II (RPN2) family protein[more]
BLAST of CsaV3_UNG055460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q93Z16|RPN2_ARATH1.1e-4049.25Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Arab... [more]
sp|Q5N7W3|RPN2_ORYSJ4.0e-2737.70Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Oryz... [more]
BLAST of CsaV3_UNG055460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYL0|A0A0A0LYL0_CUCSA5.9e-7680.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181440 PE=4 SV=1[more]
tr|A0A1S3CL79|A0A1S3CL79_CUCME1.7e-7075.76dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Cucu... [more]
tr|A0A2P4MHD1|A0A2P4MHD1_QUESU1.1e-5057.79Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Quer... [more]
tr|W9RFI4|W9RFI4_9ROSA5.2e-4856.85Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Moru... [more]
tr|A0A2I4F6K9|A0A2I4F6K9_9ROSI3.4e-4753.81dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like OS... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0008250oligosaccharyltransferase complex
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006487protein N-linked glycosylation
Vocabulary: INTERPRO
TermDefinition
IPR008814Swp1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006487 protein N-linked glycosylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0008250 oligosaccharyltransferase complex
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG055460.1CsaV3_UNG055460.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008814Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1PFAMPF05817Ribophorin_IIcoord: 9..100
e-value: 4.9E-8
score: 31.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG055460CSPI01G15720Wild cucumber (PI 183967)cpicucB060
CsaV3_UNG055460Cucsa.180530Cucumber (Gy14) v1cgycucB291
CsaV3_UNG055460CsGy1G015430Cucumber (Gy14) v2cgybcucB051
CsaV3_UNG055460MELO3C025537Melon (DHL92) v3.5.1cucmeB527
CsaV3_UNG055460MELO3C025537.2Melon (DHL92) v3.6.1cucmedB514
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG055460CsaV3_1G015830Cucumber (Chinese Long) v3cuccucB056
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG055460Silver-seed gourdcarcucB0057
CsaV3_UNG055460Silver-seed gourdcarcucB1085
CsaV3_UNG055460Cucurbita maxima (Rimu)cmacucB0268
CsaV3_UNG055460Cucurbita maxima (Rimu)cmacucB0510
CsaV3_UNG055460Cucurbita moschata (Rifu)cmocucB0258
CsaV3_UNG055460Cucurbita moschata (Rifu)cmocucB0496
CsaV3_UNG055460Cucurbita pepo (Zucchini)cpecucB0056
CsaV3_UNG055460Cucurbita pepo (Zucchini)cpecucB0655
CsaV3_UNG055460Bottle gourd (USVL1VR-Ls)cuclsiB518
CsaV3_UNG055460Watermelon (Charleston Gray)cucwcgB534
CsaV3_UNG055460Watermelon (97103) v1cucwmB575
CsaV3_UNG055460Watermelon (97103) v2cucwmbB533
CsaV3_UNG055460Wax gourdcucwgoB671