CsaV3_UNG052410 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG052410
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRegulator of Vps4 activity in the MVB pathway-like protein isoform 1
Locationscaffold72 : 46885 .. 47868 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAACCAAATGAGAGTGAAAGTACTGTTGATATGAGTTTTTATGACCATGCCAGTGTGGTCTTTGATGATTATGGTCCAGATGATGATTATATTCCAGACTACGATATCCCGAGGAGAGAATCAATTCCAGACCTTTCGTCACCTAAAGGAAAGGTGCCAATAAATCCATCACCAGATGATACTTGGATCTTCAACGGGAACAAGAATGATTCTGCTGAGAAGGCTGTTTCACACGCTCAAATTTCTGATCATACTTCACTGTTTGCTGAAAGTATTGGAGCTTTTGATGATCCTTCCCATTCTGATGAGTTGTTGCCGGCAACTTTTGACCATTCAGATGGATCTGGTTCTGAAAGTGAGGAAGAGTTGAAAGAATCTGAGATCATTGCTAAAGAAAACTCTAGTGAATTCTGCAAGAAGCAGGATTTGTACTCTGAAAAATCAGAATGGACTCGGAACATTAGTCATGGATTATCTGGATCTTCAGATGAGGACAGTAGTAGCATGCCATCTCATCGCCTCTCTTCTGAGCTAAACTCTGTACATGAATCGAAGAAGAACGACAGCCCACTGAGTTCTCCTGATATTGTAGAAGAATCAACTTCAGATGGCAGCAGTGGCTTGAATTTCGGGAAACTGAAAGGTGGCCGAAGAAACCAAAAAAGTAATAAGCTTCCATTTGCAAACAATTCATCAAGAAATGACTCATCATCTAAACAAGCATACGAAAACGATGCCTCAAAAACTGAGCAGTCTACCTTCATTTCTTCTTCTACAGCTAGGACTTCGTTGCGATCAAAGGCTTCTGAAGAGACATATGCTACAAGTGTAGAAGAGAGACGAGGTCAAGAAAAGGAATCACAACCAAGCTTAATAGCTTTAATTCCAATCTTGATGATTCAAAGGAGAAGTTCTCGGTTTATACTCTTAGAAGTGATCAAGAGCCACATAGCAAGAACGTGGTTGATGAAATCTTGA

mRNA sequence

ATGGATAAACCAAATGAGAGTGAAAGTACTGTTGATATGAGTTTTTATGACCATGCCAGTGTGGTCTTTGATGATTATGGTCCAGATGATGATTATATTCCAGACTACGATATCCCGAGGAGAGAATCAATTCCAGACCTTTCGTCACCTAAAGGAAAGGTGCCAATAAATCCATCACCAGATGATACTTGGATCTTCAACGGGAACAAGAATGATTCTGCTGAGAAGGCTGTTTCACACGCTCAAATTTCTGATCATACTTCACTGTTTGCTGAAAGTATTGGAGCTTTTGATGATCCTTCCCATTCTGATGAGTTGTTGCCGGCAACTTTTGACCATTCAGATGGATCTGGTTCTGAAAGTGAGGAAGAGTTGAAAGAATCTGAGATCATTGCTAAAGAAAACTCTAGTGAATTCTGCAAGAAGCAGGATTTGTACTCTGAAAAATCAGAATGGACTCGGAACATTAGTCATGGATTATCTGGATCTTCAGATGAGGACAGTAGTAGCATGCCATCTCATCGCCTCTCTTCTGAGCTAAACTCTGTACATGAATCGAAGAAGAACGACAGCCCACTGAGTTCTCCTGATATTGTAGAAGAATCAACTTCAGATGGCAGCAGTGGCTTGAATTTCGGGAAACTGAAAGGTGGCCGAAGAAACCAAAAAAGTAATAAGCTTCCATTTGCAAACAATTCATCAAGAAATGACTCATCATCTAAACAAGCATACGAAAACGATGCCTCAAAAACTGAGCAGTCTACCTTCATTTCTTCTTCTACAGCTAGGACTTCGTTGCGATCAAAGGCTTCTGAAGAGACATATGCTACAAGTGTAGAAGAGAGACGAGGTCAAGAAAAGGAATCACAACCAAGCTTAATAGCTTTAATTCCAATCTTGATGATTCAAAGGAGAAGTTCTCGGTTTATACTCTTAGAAGTGATCAAGAGCCACATAGCAAGAACGTGGTTGATGAAATCTTGA

Coding sequence (CDS)

ATGGATAAACCAAATGAGAGTGAAAGTACTGTTGATATGAGTTTTTATGACCATGCCAGTGTGGTCTTTGATGATTATGGTCCAGATGATGATTATATTCCAGACTACGATATCCCGAGGAGAGAATCAATTCCAGACCTTTCGTCACCTAAAGGAAAGGTGCCAATAAATCCATCACCAGATGATACTTGGATCTTCAACGGGAACAAGAATGATTCTGCTGAGAAGGCTGTTTCACACGCTCAAATTTCTGATCATACTTCACTGTTTGCTGAAAGTATTGGAGCTTTTGATGATCCTTCCCATTCTGATGAGTTGTTGCCGGCAACTTTTGACCATTCAGATGGATCTGGTTCTGAAAGTGAGGAAGAGTTGAAAGAATCTGAGATCATTGCTAAAGAAAACTCTAGTGAATTCTGCAAGAAGCAGGATTTGTACTCTGAAAAATCAGAATGGACTCGGAACATTAGTCATGGATTATCTGGATCTTCAGATGAGGACAGTAGTAGCATGCCATCTCATCGCCTCTCTTCTGAGCTAAACTCTGTACATGAATCGAAGAAGAACGACAGCCCACTGAGTTCTCCTGATATTGTAGAAGAATCAACTTCAGATGGCAGCAGTGGCTTGAATTTCGGGAAACTGAAAGGTGGCCGAAGAAACCAAAAAAGTAATAAGCTTCCATTTGCAAACAATTCATCAAGAAATGACTCATCATCTAAACAAGCATACGAAAACGATGCCTCAAAAACTGAGCAGTCTACCTTCATTTCTTCTTCTACAGCTAGGACTTCGTTGCGATCAAAGGCTTCTGAAGAGACATATGCTACAAGTGTAGAAGAGAGACGAGGTCAAGAAAAGGAATCACAACCAAGCTTAATAGCTTTAATTCCAATCTTGATGATTCAAAGGAGAAGTTCTCGGTTTATACTCTTAGAAGTGATCAAGAGCCACATAGCAAGAACGTGGTTGATGAAATCTTGA

Protein sequence

MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSPDDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSESEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSELNSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSSRNDSSSKQAYENDASKTEQSTFISSSTARTSLRSKASEETYATSVEERRGQEKESQPSLIALIPILMIQRRSSRFILLEVIKSHIARTWLMKS
Homology
[Close]
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match: XP_004135813.1 (PREDICTED: uncharacterized protein LOC101217093 [Cucumis sativus] >KGN66208.1 hypothetical protein Csa_1G580230 [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP
Sbjct: 585 MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 644

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE
Sbjct: 645 DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 704

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL
Sbjct: 705 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 764

Query: 181 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX 240
           NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX
Sbjct: 765 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX 824

Query: 241 XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQPSL 294
           XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQ  L
Sbjct: 825 XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQTKL 877

[Close]
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match: XP_008450820.1 (PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.8e-113
Identity = 238/294 (80.95%), Postives = 244/294 (82.99%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPNESES VDMSF DHASVVFDDYGPDDDYIPDYD  RRESIPDLSSPK KV IN S 
Sbjct: 585 MDKPNESESNVDMSFNDHASVVFDDYGPDDDYIPDYDFRRRESIPDLSSPKEKVLINSSS 644

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTWIFN NKNDSAEKAVSH+QISDHTSLFAE+IG+FDDPSHSDELLPATFDHSD  GSE
Sbjct: 645 DDTWIFNQNKNDSAEKAVSHSQISDHTSLFAETIGSFDDPSHSDELLPATFDHSD--GSE 704

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           +EEE KESEIIAKENSSEFCKKQDLYSEKSEWT NISHGLSGS DE++SSMPSHRLSSEL
Sbjct: 705 NEEESKESEIIAKENSSEFCKKQDLYSEKSEWTHNISHGLSGSLDEENSSMPSHRLSSEL 764

Query: 181 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKS-NKLPFANNSXXXXXX 240
           NSVHE  KNDSPLSSPDIVEESTSDG SGLNFGKLKGGRRNQKS NKLPFA NS      
Sbjct: 765 NSVHE-LKNDSPLSSPDIVEESTSDGCSGLNFGKLKGGRRNQKSNNKLPFAKNSSRNDSS 824

Query: 241 XXXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQPSL 294
                          TFISSS ARTS R   S E Y TSVEERRGQEKESQ  L
Sbjct: 825 SKQAYESDASKAEQSTFISSSAARTSFR---SAEIYDTSVEERRGQEKESQAKL 872

[Close]
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match: XP_022927973.1 (filaggrin isoform X1 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 8.3e-82
Identity = 178/294 (60.54%), Postives = 213/294 (72.45%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPN+ ESTVD SF DHAS VFDDYGP+DD +PDY+  RR+SI + SSPKGKVPIN + 
Sbjct: 593 MDKPNDHESTVDTSFNDHASAVFDDYGPEDDCVPDYEYQRRQSILEPSSPKGKVPINSAT 652

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTW+F  N NDS EK+VSH+QISD  SLFA ++G+FDDPSHSD+LLPATFDHSDG  SE
Sbjct: 653 DDTWVFKQNMNDSPEKSVSHSQISDRASLFAGNVGSFDDPSHSDDLLPATFDHSDGPSSE 712

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           SE+E +E E+I K++ S+F K+Q+L SEK EW++NISHG  GSSDED+ S PSH LSSEL
Sbjct: 713 SEKEPEEFEVIGKDHYSKFSKRQNLPSEKPEWSQNISHGSPGSSDEDNRSTPSHHLSSEL 772

Query: 181 NSVHESKKNDSPLSSPD------IVEESTSDGSSGLNFGKLKGGRRNQKSN-KLPFANNS 240
             +HE KK DSP  S D      I+EESTS+ +SGLNFGKLKGG RNQKSN +   A+NS
Sbjct: 773 PLLHELKKKDSPPRSLDILHDSVILEESTSESNSGLNFGKLKGGLRNQKSNSRRSHASNS 832

Query: 241 XXXXXXXXXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEK 288
                                T +SSSTA+TS RS A  E Y  SVEE+ G+EK
Sbjct: 833 SISNLSSKQACENDASKTAQPTLVSSSTAKTSFRSNARSELYDGSVEEKPGEEK 886

[Close]
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match: XP_022927981.1 (uncharacterized protein LOC111434877 isoform X2 [Cucurbita moschata])

HSP 1 Score: 313.5 bits (802), Expect = 8.3e-82
Identity = 178/294 (60.54%), Postives = 213/294 (72.45%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPN+ ESTVD SF DHAS VFDDYGP+DD +PDY+  RR+SI + SSPKGKVPIN + 
Sbjct: 572 MDKPNDHESTVDTSFNDHASAVFDDYGPEDDCVPDYEYQRRQSILEPSSPKGKVPINSAT 631

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTW+F  N NDS EK+VSH+QISD  SLFA ++G+FDDPSHSD+LLPATFDHSDG  SE
Sbjct: 632 DDTWVFKQNMNDSPEKSVSHSQISDRASLFAGNVGSFDDPSHSDDLLPATFDHSDGPSSE 691

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           SE+E +E E+I K++ S+F K+Q+L SEK EW++NISHG  GSSDED+ S PSH LSSEL
Sbjct: 692 SEKEPEEFEVIGKDHYSKFSKRQNLPSEKPEWSQNISHGSPGSSDEDNRSTPSHHLSSEL 751

Query: 181 NSVHESKKNDSPLSSPD------IVEESTSDGSSGLNFGKLKGGRRNQKSN-KLPFANNS 240
             +HE KK DSP  S D      I+EESTS+ +SGLNFGKLKGG RNQKSN +   A+NS
Sbjct: 752 PLLHELKKKDSPPRSLDILHDSVILEESTSESNSGLNFGKLKGGLRNQKSNSRRSHASNS 811

Query: 241 XXXXXXXXXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEK 288
                                T +SSSTA+TS RS A  E Y  SVEE+ G+EK
Sbjct: 812 SISNLSSKQACENDASKTAQPTLVSSSTAKTSFRSNARSELYDGSVEEKPGEEK 865

[Close]
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match: XP_023531863.1 (filaggrin-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.5 bits (802), Expect = 8.3e-82
Identity = 178/294 (60.54%), Postives = 213/294 (72.45%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKP++ ESTVD +F DHAS VFDDYGPDDD +PDY+  RR+SI + SSPKGKVPIN + 
Sbjct: 593 MDKPSDHESTVDTNFNDHASAVFDDYGPDDDCVPDYEYQRRQSILEPSSPKGKVPINSAT 652

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTW+F  N NDS EK+VSH+QISD  SLFA ++G+FDDPSHSD+LLPATFDHSDG  SE
Sbjct: 653 DDTWVFKQNMNDSPEKSVSHSQISDRASLFAGNVGSFDDPSHSDDLLPATFDHSDGPSSE 712

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           SE+E +E E+I K++ S+F K+Q+L SEK EW++NISHG  GSSDED+ + PSHRLSSEL
Sbjct: 713 SEKEPEEFEVIGKDHYSKFSKRQNLPSEKPEWSQNISHGSPGSSDEDNRNTPSHRLSSEL 772

Query: 181 NSVHESKKNDSPLSSPD------IVEESTSDGSSGLNFGKLKGGRRNQKSN-KLPFANNS 240
             VHE KK DSP  S D      I+EESTS+ +SGLNFGKLKGG RNQKSN +   A+NS
Sbjct: 773 PLVHELKKKDSPPRSLDILHDSVILEESTSESNSGLNFGKLKGGLRNQKSNPRRSHASNS 832

Query: 241 XXXXXXXXXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEK 288
                                T +SSST RTS RS A  E Y  SVEE+ G+EK
Sbjct: 833 SISDLSSKQACENDASKTAQPTLVSSSTTRTSFRSNAPSELYDGSVEEKPGEEK 886

[Close]
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match: tr|A0A0A0LWR1|A0A0A0LWR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 9.8e-140
Identity = 291/293 (99.32%), Postives = 291/293 (99.32%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP
Sbjct: 585 MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 644

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE
Sbjct: 645 DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 704

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL
Sbjct: 705 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 764

Query: 181 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX 240
           NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX
Sbjct: 765 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKSNKLPFANNSXXXXXXX 824

Query: 241 XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQPSL 294
           XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQ  L
Sbjct: 825 XXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQTKL 877

[Close]
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match: tr|A0A1S3BQ24|A0A1S3BQ24_CUCME (uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 238/294 (80.95%), Postives = 244/294 (82.99%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPRRESIPDLSSPKGKVPINPSP 60
           MDKPNESES VDMSF DHASVVFDDYGPDDDYIPDYD  RRESIPDLSSPK KV IN S 
Sbjct: 585 MDKPNESESNVDMSFNDHASVVFDDYGPDDDYIPDYDFRRRESIPDLSSPKEKVLINSSS 644

Query: 61  DDTWIFNGNKNDSAEKAVSHAQISDHTSLFAESIGAFDDPSHSDELLPATFDHSDGSGSE 120
           DDTWIFN NKNDSAEKAVSH+QISDHTSLFAE+IG+FDDPSHSDELLPATFDHSD  GSE
Sbjct: 645 DDTWIFNQNKNDSAEKAVSHSQISDHTSLFAETIGSFDDPSHSDELLPATFDHSD--GSE 704

Query: 121 SEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSSSMPSHRLSSEL 180
           +EEE KESEIIAKENSSEFCKKQDLYSEKSEWT NISHGLSGS DE++SSMPSHRLSSEL
Sbjct: 705 NEEESKESEIIAKENSSEFCKKQDLYSEKSEWTHNISHGLSGSLDEENSSMPSHRLSSEL 764

Query: 181 NSVHESKKNDSPLSSPDIVEESTSDGSSGLNFGKLKGGRRNQKS-NKLPFANNSXXXXXX 240
           NSVHE  KNDSPLSSPDIVEESTSDG SGLNFGKLKGGRRNQKS NKLPFA NS      
Sbjct: 765 NSVHE-LKNDSPLSSPDIVEESTSDGCSGLNFGKLKGGRRNQKSNNKLPFAKNSSRNDSS 824

Query: 241 XXXXXXXXXXXXXXXTFISSSTARTSLRSKASEETYATSVEERRGQEKESQPSL 294
                          TFISSS ARTS R   S E Y TSVEERRGQEKESQ  L
Sbjct: 825 SKQAYESDASKAEQSTFISSSAARTSFR---SAEIYDTSVEERRGQEKESQAKL 872

[Close]
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match: tr|A0A2P4H8T4|A0A2P4H8T4_QUESU (Ist1-like protein OS=Quercus suber OX=58331 GN=CFP56_43096 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.7e-11
Identity = 81/287 (28.22%), Postives = 140/287 (48.78%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDD---YIPDYDIPRRESIPDLSSPKGKVPIN 60
           +D+ N   +  + + YD+A+VVFD YG DD+   +  + +  R+ES    SSP  K P+N
Sbjct: 535 IDEVNIGTNDEETTSYDNAAVVFDGYGSDDNNYKFDEENEFTRQESSLFFSSPGRKSPVN 594

Query: 61  PSPD-DTWIFNGNKNDSAEKAV--SHAQISDHTS-LFAESIGAFDDPSHSDELLPATFDH 120
              + + W    N  +S   ++  SH+    H+S +F+ES+ +    S   +L   T+D 
Sbjct: 595 LFENTNAWSPKRNIGESLGDSIFQSHSFSEQHSSVVFSESLTSSTASSQPHDLSHVTYDD 654

Query: 121 SDGSGSESEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSD---EDSSS 180
           S+G  S+ EEEL +S+++   +S  + ++Q++Y   S+  ++ SHGL+GSS    E+++S
Sbjct: 655 SEGPSSDGEEELGKSKLVGSMDSDIYHREQNVYDRNSDLNQSASHGLTGSSSVEKENAAS 714

Query: 181 -----MPSHRLSSELNSVH-------------------------ESKKNDSPLS------ 233
                +P+  + S+   V                            KK++S LS      
Sbjct: 715 NRKPWLPTSSVDSDPMEVRFDTNQGNTFSILSEKKFGYGDVPSPRHKKSESDLSIKYNDH 774

[Close]
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match: tr|A0A2I4EI01|A0A2I4EI01_9ROSI (uncharacterized protein LOC108989762 isoform X2 OS=Juglans regia OX=51240 GN=LOC108989762 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-09
Identity = 81/288 (28.12%), Postives = 128/288 (44.44%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPR----RESIPDLSSPKGKVPI 60
           +D+ N        + YD  SVVFD+YG DD     +D+      +ES    SSP  K  +
Sbjct: 543 IDEGNTHSDNEKTTSYDKGSVVFDEYGSDDGDDYKFDVENEFKGQESSLYFSSPGRKSAV 602

Query: 61  NPSPD-DTWIFNGNKNDSAEKAV--SHAQISDHTS-LFAESIGAFDDPSHSDELLPATFD 120
           N   + D W    N ++  EK++  SH+    H+S +F ES      P+   + L ATFD
Sbjct: 603 NLLENTDAWRHGKNMDEPFEKSISQSHSFGGRHSSHVFPESSSV---PTEPHDSLDATFD 662

Query: 121 HSDGSGSESEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSS--- 180
           +SD   S+  E L++S+ +A      +  KQD+Y   SE  ++ SHGL GSS  +     
Sbjct: 663 NSDDQSSDDNENLEKSKFVANTEPGIYPSKQDVYERNSELNKSASHGLIGSSSAEKEHVA 722

Query: 181 -----SMPSHRLSS-------------ELNSVHESKKNDSPLSS---------------- 233
                S+P   + S             E +++ + K  +S L S                
Sbjct: 723 YKRKPSLPPSSVDSDPMEVRLETNQGKEFHALSDRKFGNSDLPSSKYEISGSDSSIEDKE 782

[Close]
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match: tr|A0A2I4EI11|A0A2I4EI11_9ROSI (uncharacterized protein LOC108989762 isoform X1 OS=Juglans regia OX=51240 GN=LOC108989762 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-09
Identity = 81/288 (28.12%), Postives = 128/288 (44.44%), Query Frame = 0 

Query: 1   MDKPNESESTVDMSFYDHASVVFDDYGPDDDYIPDYDIPR----RESIPDLSSPKGKVPI 60
           +D+ N        + YD  SVVFD+YG DD     +D+      +ES    SSP  K  +
Sbjct: 617 IDEGNTHSDNEKTTSYDKGSVVFDEYGSDDGDDYKFDVENEFKGQESSLYFSSPGRKSAV 676

Query: 61  NPSPD-DTWIFNGNKNDSAEKAV--SHAQISDHTS-LFAESIGAFDDPSHSDELLPATFD 120
           N   + D W    N ++  EK++  SH+    H+S +F ES      P+   + L ATFD
Sbjct: 677 NLLENTDAWRHGKNMDEPFEKSISQSHSFGGRHSSHVFPESSSV---PTEPHDSLDATFD 736

Query: 121 HSDGSGSESEEELKESEIIAKENSSEFCKKQDLYSEKSEWTRNISHGLSGSSDEDSS--- 180
           +SD   S+  E L++S+ +A      +  KQD+Y   SE  ++ SHGL GSS  +     
Sbjct: 737 NSDDQSSDDNENLEKSKFVANTEPGIYPSKQDVYERNSELNKSASHGLIGSSSAEKEHVA 796

Query: 181 -----SMPSHRLSS-------------ELNSVHESKKNDSPLSS---------------- 233
                S+P   + S             E +++ + K  +S L S                
Sbjct: 797 YKRKPSLPPSSVDSDPMEVRLETNQGKEFHALSDRKFGNSDLPSSKYEISGSDSSIEDKE 856

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG052410 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135813.11.5e-13999.32PREDICTED: uncharacterized protein LOC101217093 [Cucumis sativus] >KGN66208.1 hy... [more]
XP_008450820.11.8e-11380.95PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo][more]
XP_022927973.18.3e-8260.54filaggrin isoform X1 [Cucurbita moschata][more]
XP_022927981.18.3e-8260.54uncharacterized protein LOC111434877 isoform X2 [Cucurbita moschata][more]
XP_023531863.18.3e-8260.54filaggrin-like isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_UNG052410 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG052410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG052410 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWR1|A0A0A0LWR1_CUCSA9.8e-14099.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=4 SV=1[more]
tr|A0A1S3BQ24|A0A1S3BQ24_CUCME1.2e-11380.95uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=... [more]
tr|A0A2P4H8T4|A0A2P4H8T4_QUESU1.7e-1128.22Ist1-like protein OS=Quercus suber OX=58331 GN=CFP56_43096 PE=4 SV=1[more]
tr|A0A2I4EI01|A0A2I4EI01_9ROSI2.8e-0928.13uncharacterized protein LOC108989762 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4EI11|A0A2I4EI11_9ROSI2.8e-0928.13uncharacterized protein LOC108989762 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015031 protein transport
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG052410.1CsaV3_UNG052410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..179

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG052410CmaCh11G006740Cucurbita maxima (Rimu)cmacucB0154
CsaV3_UNG052410CmoCh11G006850Cucurbita moschata (Rifu)cmocucB0139
CsaV3_UNG052410Cp4.1LG04g10520Cucurbita pepo (Zucchini)cpecucB0850
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG052410Cucumber (Chinese Long) v3cuccucB033
CsaV3_UNG052410Silver-seed gourdcarcucB0046
CsaV3_UNG052410Silver-seed gourdcarcucB0112
CsaV3_UNG052410Cucumber (Gy14) v2cgybcucB036
CsaV3_UNG052410Cucumber (Gy14) v1cgycucB449
CsaV3_UNG052410Cucurbita maxima (Rimu)cmacucB0091
CsaV3_UNG052410Cucurbita moschata (Rifu)cmocucB0081
CsaV3_UNG052410Cucurbita pepo (Zucchini)cpecucB0462
CsaV3_UNG052410Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG052410Bottle gourd (USVL1VR-Ls)cuclsiB343
CsaV3_UNG052410Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG052410Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG052410Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG052410Watermelon (97103) v1cucwmB383
CsaV3_UNG052410Watermelon (97103) v2cucwmbB350
CsaV3_UNG052410Wax gourdcucwgoB441