CsaV3_UNG052400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG052400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRegulator of Vps4 activity in the MVB pathway protein
Locationscaffold72 : 46119 .. 46798 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGTTCAATCAAGTAACTCAGAGCAACCTCAGTCAATGAAACCTTCCAAACCAATTCCTGAAACTAAAAATCTATCCATGAAGAAAAATTAAAATCTCCTACGAAGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

mRNA sequence

ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

Coding sequence (CDS)

ATGAAAAACAGTCCTCATCGAGTTATTGGACTTTCTAGACGGACCAAAGCGTCTCCTAAAAGTCCAAGTCCACATTTAGAGGACTCACACAGGACTCCCACGACCATGAGTCATGAGGATATAATTGAGAGAAAAGCTTCAACGAGTTTCTATGCAACTACATCGCCACTGAGGGCAAAAACTGGAACAAGATACTCTGATCGTTTGGAAATTTCAGAGCAGCCTCAATCATCTAAACCTTTCAAGCAAACTCATGAAACTAAGAGGTCTTTTATTGAGGAAAGGTCTAGACCTTCTGCAGAGGAACAGCAATACAATTATCCACCAGAGATAAATAGACGAGGCAATTTTGAGAGTTCAAAGTTTTCTTCTTCAAGGGATACGACAGCAGCTCCAGTGAAGACTCGGGACTTGCCATCCACTCCTTCACCAAAATTAGAAACACAAGGCAACTCTGAGAGTTCGAAAAAGGAGAAGACTGAGGCAGTTGAGAAAGCTAGTCATGTTCACCCAAAGCTACCCGACTACGACAACTTTGCAGCTCACTTCCTCGCTCTTAGACAGAATAACAAGTAA

Protein sequence

MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAKTGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESSKFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Homology
[Close]
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_004135813.1 (PREDICTED: uncharacterized protein LOC101217093 [Cucumis sativus] >KGN66208.1 hypothetical protein Csa_1G580230 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 6.1e-93
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 942  MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 1001

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 1002 TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 1061

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSSRDTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1062 KFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPK 1121

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1122 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1167

[Close]
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_008450820.1 (PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo])

HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77
Identity = 169/226 (74.78%), Postives = 177/226 (78.32%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASP+SPSP LE+SHR PT  SHEDIIERKA T FYAT SPLRAK
Sbjct: 937  MKNSPRRVIGLSRRTKASPRSPSPQLENSHRNPT--SHEDIIERKAPTGFYATASPLRAK 996

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDR EI EQPQSSKPFKQT++TKRSF+EERSRPSAEEQQYNYPPEINR+GNFESS
Sbjct: 997  TGTRYSDRSEIPEQPQSSKPFKQTYDTKRSFVEERSRPSAEEQQYNYPPEINRQGNFESS 1056

Query: 121  KFSSSRDTTAAPVKTR-----------DLPSTPSP------------------------K 180
            KFSSS+DTTAAPVKTR             PS P P                        K
Sbjct: 1057 KFSSSKDTTAAPVKTRVKSSNLEQPQSKKPSKPIPETTKSXXXXXXXXXXXXXXXXXXXK 1116

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKT+AVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1117 LETQGNSESSKKEKTKAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1160

[Close]
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_022159239.1 (uncharacterized protein LOC111025657 isoform X1 [Momordica charantia])

HSP 1 Score: 233.4 bits (594), Expect = 6.4e-58
Identity = 134/233 (57.51%), Postives = 165/233 (70.82%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            +KNSPHR+IGLSRRT ASPK+PS ++EDS+ TPT  SH+D+ E+KAS S+Y++ +PL+AK
Sbjct: 960  VKNSPHRLIGLSRRTTASPKTPSSYVEDSYGTPT--SHDDVTEQKASRSYYSSPAPLKAK 1019

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTR S RLE SEQPQSSKPFKQT ETK    EER + SA+EQQ NYPPE++R+GN ESS
Sbjct: 1020 TGTRTSSRLESSEQPQSSKPFKQTPETKMPLNEERLKSSAKEQQSNYPPELDRQGNSESS 1079

Query: 121  KFSSSRDTTAAPVK------------------------------------------TRDL 180
            KFSS+R+TT A VK                                          T++L
Sbjct: 1080 KFSSARETTTASVKTWAQTRNSHYLANSEQPTQSTKPSKPIPESKRSFHEERLTSSTKEL 1139

Query: 181  PSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            PS PSP++ETQG+SESSK+EK +AV+KASHVHPKLPDYD+FAAHF +LRQN K
Sbjct: 1140 PSNPSPEVETQGDSESSKREKMKAVQKASHVHPKLPDYDDFAAHFRSLRQNYK 1190

[Close]
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_022159240.1 (uncharacterized protein LOC111025657 isoform X2 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57
Identity = 133/231 (57.58%), Postives = 164/231 (71.00%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            +KNSPHR+IGLSRRT ASPK+PS ++EDS+ TPT  SH+D+ E+KAS S+Y++ +PL+AK
Sbjct: 960  VKNSPHRLIGLSRRTTASPKTPSSYVEDSYGTPT--SHDDVTEQKASRSYYSSPAPLKAK 1019

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTR S RLE SEQPQSSKPFKQT ETK    EER + SA+EQQ NYPPE++R+GN ESS
Sbjct: 1020 TGTRTSSRLESSEQPQSSKPFKQTPETKMPLNEERLKSSAKEQQSNYPPELDRQGNSESS 1079

Query: 121  KFSSSRDTTAAPVK------------------------------------------TRDL 180
            KFSS+R+TT A VK                                          T++L
Sbjct: 1080 KFSSARETTTASVKTWAQTRNSHYLANSEQPTQSTKPSKPIPESKRSFHEERLTSSTKEL 1139

Query: 181  PSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQN 190
            PS PSP++ETQG+SESSK+EK +AV+KASHVHPKLPDYD+FAAHF +LRQN
Sbjct: 1140 PSNPSPEVETQGDSESSKREKMKAVQKASHVHPKLPDYDDFAAHFRSLRQN 1188

[Close]
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match: XP_022927973.1 (filaggrin isoform X1 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 3.9e-55
Identity = 136/227 (59.91%), Postives = 158/227 (69.60%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            ++NSPHRV+GLSRRTKASPK+PS  +EDS+ TPT  SHED+ ERKAS S+ A+ SPL+AK
Sbjct: 957  VENSPHRVMGLSRRTKASPKTPSSRMEDSYGTPT--SHEDVSERKASRSYDASKSPLKAK 1016

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNY-PPEINRRGNFES 120
            TGTRYSD  E S QPQSSKPF QT ETKRS+ EER + SA+E+Q  Y PPE++R GNFE 
Sbjct: 1017 TGTRYSDHYESSRQPQSSKPFNQTPETKRSYNEERLKSSAKERQSYYPPPELDRLGNFE- 1076

Query: 121  SKFSSSRDTTAAPVKTR-----------------------------------DLPSTPSP 180
                SSR TTAA  KTR                                   +  S PSP
Sbjct: 1077 ----SSRGTTAASAKTRAQSXXXXXXXXXXXXXXXXETRRSFHEERPTSSTKERLSNPSP 1136

Query: 181  KLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            K+ETQ N+ESS+KEKT+AVEKASHVHPKLPDYDNFAAHFL+LRQNNK
Sbjct: 1137 KMETQDNTESSEKEKTKAVEKASHVHPKLPDYDNFAAHFLSLRQNNK 1176

[Close]
BLAST of CsaV3_UNG052400 vs. TAIR10
Match: AT2G14830.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 44.7 bits (104), Expect = 7.6e-05
Identity = 19/39 (48.72%), Postives = 25/39 (64.10%), Query Frame = 0 

Query: 153 ESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
           +   +E   + +KA HVHPKLPDYD   AHF ALR+  +
Sbjct: 408 QKESEEGERSFKKAMHVHPKLPDYDQIVAHFTALRKQQQ 446

[Close]
BLAST of CsaV3_UNG052400 vs. TAIR10
Match: AT4G29440.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 42.0 bits (97), Expect = 4.9e-04
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0 

Query: 154  SSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQ 189
            +S   +T A EKASHVHPKLPDYD+  A   ALR+
Sbjct: 1056 TSPDPETPAKEKASHVHPKLPDYDDIFAKLGALRR 1090

[Close]
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match: tr|A0A0A0LWR1|A0A0A0LWR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.0e-93
Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK
Sbjct: 942  MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 1001

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS
Sbjct: 1002 TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 1061

Query: 121  KFSSSRDTTAAPVKTR-----------------------------------DLPSTPSPK 180
            KFSSSRDTTAAPVKTR                                   DLPSTPSPK
Sbjct: 1062 KFSSSRDTTAAPVKTRVQSSNSEQPQSMKPSKPIPETKKSIHEEKLKSPTKDLPSTPSPK 1121

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1122 LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1167

[Close]
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match: tr|A0A1S3BQ24|A0A1S3BQ24_CUCME (uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-77
Identity = 169/226 (74.78%), Postives = 177/226 (78.32%), Query Frame = 0 

Query: 1    MKNSPHRVIGLSRRTKASPKSPSPHLEDSHRTPTTMSHEDIIERKASTSFYATTSPLRAK 60
            MKNSP RVIGLSRRTKASP+SPSP LE+SHR PT  SHEDIIERKA T FYAT SPLRAK
Sbjct: 937  MKNSPRRVIGLSRRTKASPRSPSPQLENSHRNPT--SHEDIIERKAPTGFYATASPLRAK 996

Query: 61   TGTRYSDRLEISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 120
            TGTRYSDR EI EQPQSSKPFKQT++TKRSF+EERSRPSAEEQQYNYPPEINR+GNFESS
Sbjct: 997  TGTRYSDRSEIPEQPQSSKPFKQTYDTKRSFVEERSRPSAEEQQYNYPPEINRQGNFESS 1056

Query: 121  KFSSSRDTTAAPVKTR-----------DLPSTPSP------------------------K 180
            KFSSS+DTTAAPVKTR             PS P P                        K
Sbjct: 1057 KFSSSKDTTAAPVKTRVKSSNLEQPQSKKPSKPIPETTKSXXXXXXXXXXXXXXXXXXXK 1116

Query: 181  LETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFAAHFLALRQNNK 192
            LETQGNSESSKKEKT+AVEKASHVHPKLPDYDNFAAHFLALRQNNK
Sbjct: 1117 LETQGNSESSKKEKTKAVEKASHVHPKLPDYDNFAAHFLALRQNNK 1160

[Close]
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match: tr|B9RKC1|B9RKC1_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1048170 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.9e-07
Identity = 71/210 (33.81%), Postives = 104/210 (49.52%), Query Frame = 0 

Query: 10   GLSRRTKASPKSPSPHLEDSHRTP--TTMSHEDIIERKAST-SFYATTSPLRAKTGTRYS 69
            G SRRTK    S   +     R P  ++++ + ++E K+S+ S YAT + ++  + T+ S
Sbjct: 949  GFSRRTKTPLSSSEKNSSSKSRVPIKSSVTADSVVEEKSSSVSSYATETQIKPPSQTKNS 1008

Query: 70   DRLEISEQPQSSKPFKQ--THETKRSFIEERSRPS--AEEQQYNYPPEIN------RRGN 129
                  +Q +SS+          KRS  EE S  S   ++ + N+P + N      R G 
Sbjct: 1009 YYQSSFKQGKSSEQTSSMPVSPYKRSVHEESSSKSYYPKDTRQNHPSQSNSPEYGERSGQ 1068

Query: 130  F---ESSKF--SSSRDTTAAPVKT--RDLPSTPSPKLETQGNSESSKKEKTEA------- 189
                ESSKF   S R +     K+  R+ PS  SP+    G +ES+K   + A       
Sbjct: 1069 LKLAESSKFIPESKRSSREEYPKSSAREQPSNLSPR---TGGAESTKTSSSPADPPSREN 1128

Query: 190  -VEKASHVHPKLPDYDNFAAHFLALRQNNK 192
             + KASHVHPKLPDYD   AH L+LRQN +
Sbjct: 1129 SINKASHVHPKLPDYDILTAHLLSLRQNRQ 1155

[Close]
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match: tr|A0A2I4EI01|A0A2I4EI01_9ROSI (uncharacterized protein LOC108989762 isoform X2 OS=Juglans regia OX=51240 GN=LOC108989762 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 0 

Query: 8    VIGLSRRTKASPKSP-SPHLEDSHRTPTTMSHEDIIERKAST-SFYATTSPLRAKTGTRY 67
            + G SRRTKA+  S  S +L+ +  +  +++ +    RK+S+ S YAT  P +  + T+ 
Sbjct: 956  ITGFSRRTKAASSSTRSSYLKPTDGSEASLTPDYGARRKSSSRSSYATEVPAKPLSQTKS 1015

Query: 68   SDRL-----EISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 127
            SD L      ++ +  +SKP      +KRS  EE  + S  +   +  P+I   G+ E S
Sbjct: 1016 SDHLGSYERRVTAEQSTSKPMP---ASKRSLNEESLKSSTRKYSASSLPKIRASGSSEIS 1075

Query: 128  KFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFA 187
            + +S              PST +P                   EKASHVHPKLPDYD  A
Sbjct: 1076 ESAS--------------PSTETP-----------------PTEKASHVHPKLPDYDALA 1112

Query: 188  AHFLALRQNNK 192
            A F +LR++ +
Sbjct: 1136 AQFQSLRRSRE 1112

[Close]
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match: tr|A0A2I4EI11|A0A2I4EI11_9ROSI (uncharacterized protein LOC108989762 isoform X1 OS=Juglans regia OX=51240 GN=LOC108989762 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.4e-06
Identity = 60/191 (31.41%), Postives = 92/191 (48.17%), Query Frame = 0 

Query: 8    VIGLSRRTKASPKSP-SPHLEDSHRTPTTMSHEDIIERKAST-SFYATTSPLRAKTGTRY 67
            + G SRRTKA+  S  S +L+ +  +  +++ +    RK+S+ S YAT  P +  + T+ 
Sbjct: 1030 ITGFSRRTKAASSSTRSSYLKPTDGSEASLTPDYGARRKSSSRSSYATEVPAKPLSQTKS 1089

Query: 68   SDRL-----EISEQPQSSKPFKQTHETKRSFIEERSRPSAEEQQYNYPPEINRRGNFESS 127
            SD L      ++ +  +SKP      +KRS  EE  + S  +   +  P+I   G+ E S
Sbjct: 1090 SDHLGSYERRVTAEQSTSKPMP---ASKRSLNEESLKSSTRKYSASSLPKIRASGSSEIS 1149

Query: 128  KFSSSRDTTAAPVKTRDLPSTPSPKLETQGNSESSKKEKTEAVEKASHVHPKLPDYDNFA 187
            + +S              PST +P                   EKASHVHPKLPDYD  A
Sbjct: 1150 ESAS--------------PSTETP-----------------PTEKASHVHPKLPDYDALA 1186

Query: 188  AHFLALRQNNK 192
            A F +LR++ +
Sbjct: 1210 AQFQSLRRSRE 1186

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG052400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135813.16.1e-9384.51PREDICTED: uncharacterized protein LOC101217093 [Cucumis sativus] >KGN66208.1 hy... [more]
XP_008450820.12.1e-7774.78PREDICTED: uncharacterized protein LOC103492291 [Cucumis melo][more]
XP_022159239.16.4e-5857.51uncharacterized protein LOC111025657 isoform X1 [Momordica charantia][more]
XP_022159240.11.4e-5757.58uncharacterized protein LOC111025657 isoform X2 [Momordica charantia][more]
XP_022927973.13.9e-5559.91filaggrin isoform X1 [Cucurbita moschata][more]
BLAST of CsaV3_UNG052400 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G14830.17.6e-0548.72Regulator of Vps4 activity in the MVB pathway protein[more]
AT4G29440.14.9e-0460.00Regulator of Vps4 activity in the MVB pathway protein[more]
BLAST of CsaV3_UNG052400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG052400 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWR1|A0A0A0LWR1_CUCSA4.0e-9384.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580230 PE=4 SV=1[more]
tr|A0A1S3BQ24|A0A1S3BQ24_CUCME1.4e-7774.78uncharacterized protein LOC103492291 OS=Cucumis melo OX=3656 GN=LOC103492291 PE=... [more]
tr|B9RKC1|B9RKC1_RICCO9.9e-0733.81Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1048170 PE=4 SV=1[more]
tr|A0A2I4EI01|A0A2I4EI01_9ROSI6.4e-0631.41uncharacterized protein LOC108989762 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
tr|A0A2I4EI11|A0A2I4EI11_9ROSI6.4e-0631.41uncharacterized protein LOC108989762 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: INTERPRO
TermDefinition
IPR005061Ist1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG052400.1CsaV3_UNG052400.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 116..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..100
NoneNo IPR availablePANTHERPTHR12161:SF13REGULATOR OF VPS4 ACTIVITY PROTEIN-RELATEDcoord: 24..191
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161UNCHARACTERIZED DUF292coord: 24..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG052400CSPI01G27840Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG052400Cucsa.288530Cucumber (Gy14) v1cgycucB449
CsaV3_UNG052400CsGy1G027070Cucumber (Gy14) v2cgybcucB036
CsaV3_UNG052400Carg12266Silver-seed gourdcarcucB0046
CsaV3_UNG052400Cla011232Watermelon (97103) v1cucwmB383
CsaV3_UNG052400MELO3C015441Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG052400ClCG03G015850Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG052400Lsi06G002530Bottle gourd (USVL1VR-Ls)cuclsiB343
CsaV3_UNG052400MELO3C015441.2Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG052400Cla97C03G066120Watermelon (97103) v2cucwmbB350
CsaV3_UNG052400Bhi02G001592Wax gourdcucwgoB441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG052400CsaV3_1G040130Cucumber (Chinese Long) v3cuccucB033
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG052400Silver-seed gourdcarcucB0112
CsaV3_UNG052400Cucurbita maxima (Rimu)cmacucB0091
CsaV3_UNG052400Cucurbita maxima (Rimu)cmacucB0154
CsaV3_UNG052400Cucurbita moschata (Rifu)cmocucB0081
CsaV3_UNG052400Cucurbita moschata (Rifu)cmocucB0139
CsaV3_UNG052400Cucurbita pepo (Zucchini)cpecucB0462
CsaV3_UNG052400Cucurbita pepo (Zucchini)cpecucB0850