CsaV3_UNG050350 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG050350
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description60S ribosomal protein L31
Locationscaffold72 : 30690 .. 32628 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGAAATTAGGGTTTCCGTGGCTTCTCATCTTCACTCAACGCCTGCTTCATCGCTTCTAACCCTCGTAAGCTTCCTCTCGATCTCCCATTTTTCGATTTCTTTTCTCCAACAATTTGTTTCCTCCGACATTGTTCGTTTTTCTATGAAACTGATTTTATTGGTTACTACTTTGTTTTCATTGTTTCTGATTTTCATCAACTTGTTGCAGTTTAATCGAAGAAGCCGACTGCAGATATGGTTGAGAAAACGAAGGGAAGGAAGGAGGAGGTGGTTAGCAGAGAGTACACCATCAATCTACACAAGCGTTTGCATGGCTGGTACCATCTCATTCATCTTCATGAACTGATGCCTTTTTCCGCTTAATTAAATTAACATGCTGTACTTTTTTTATGTTTTTTTCAATATATTTGGCGAGATGTTTTCAGTTTTTATGCTTTGAAACTGATATCTTTGTGATGAGATGTTAGTTTTGTTCATGGGTTTGGTTATAGATTAAGAATTTGGGAACTGGCCTGGTCGGTCACAACCGATATGCTAATTGTGACATTTGTATAAGATCTGAACTTGGGGACAAAAGATGACTTTCATCAGGGATTTTTTAAGACATGAACTGAACAAAGGATAGTAGAAACTAGAATAAGCTGGCTGTTAAATGTTTCTGTGGAGTGTGTTGTTGGAGAGTTCAAGAAGAGTTATGAAAGCAAATTTTGGAGTAATTTTACTGTTCATCATAGGCATTTGTAATATTTCACTTGGTTTCGATAAGAAGATTAAACATTAGAGTCTATCGTGTAGGTCTTAATATTTTAGGAAGCGGGGTTGTTTTATGGAAAGAGAAATAAAAGAGGTGTTAGATGTTTGTGGAGGGGGACCTTAGTGTTGTTTGGTCCTTGGTGAAGTTTTATGTCTCTTTTGGGTTCGATTTTGAATGCCTTTTAACCATTCTTTAGGCAAAATCTTAGTCAGTCCGATCCTGTTTCTTTGAGGGTTTGTTTTGTGGGTTTTTTTTATTCCCTCGAGTTCTTTCAATTTTCTCAATGATAGTTGTGTTTTCTATATAAAAAAAGTAGTTTGTATGTGCTGTTTTTTTTCTATGATTTTCTGTATTTCTCAATGGAAATTGCGTTTTCTTTCAACGGGCTGGTTATGGTGTATGTGCTGTTTTTCATTTCAACGCACACGTTTTCATGAGTAATCTCTAGTCTTTTATAGGTTTTCCCTCTCATTGTATCGGTAGATCTTAGATCCAAGGTTAAATTGTGGATTCATTTAGAGGATTCTATTACTGTAACAATTCTAGATCTCATGTTCTACTCTACTTCTAAATTATAGTACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAAGAGATAAGGAAGTTTGCTGAGAAAGCAATGGGAACTAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCATATTTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTTCGAATTGCACGCAAGAGGAACGATGATGAAGATGCAAAGGAAGAACTGTATTCTCTCGTAACCGTAGCAGAAATTCCAGCAGAAGGTTTGAAAGGATTAGGCACTAAGGTCATCGATGATGAAGAAGATTGATCTATCACACACACCCATTTGCCTTGTTATCTGTTATTTCCAACTTTTAGTAAAAATTTTTGGTACAAGACTTGTTTGAGTCAAGAGTTATTCTTCATTGTCCTTGCTTTGGTGCGCTTTGTTTATTTTACTTTGAAATCTTAGCTGAAGCAGCTTTTTGTTAGTTATAATAGAACTTGCAATGTTTTTTAACTTTAGAGTTTCTTCTGTTTCTGTTCGTGGCGACACTAATTTTTACCTTTCATTCCTCAACTTTTCACATCTTTTAATGACTAAGCTCACTTGACCTATAAATATGAACTTTAGGATCAAGCATTGATAG

mRNA sequence

ATGGTTGAGAAAACGAAGGGAAGGAAGGAGGAGGTGGTTAGCAGAGAGTACACCATCAATCTACACAAGCGTTTGCATGGCTGTACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAAGAGATAAGGAAGTTTGCTGAGAAAGCAATGGGAACTAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCATATTTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTTCGAATTGCACGCAAGAGGAACGATGATGAAGATGCAAAGGAAGAACTGTATTCTCTCGTAACCGTAGCAGAAATTCCAGCAGAAGGTTTGAAAGGATTAGGCACTAAGGTCATCGATGATGAAGAAGATTGA

Coding sequence (CDS)

ATGGTTGAGAAAACGAAGGGAAGGAAGGAGGAGGTGGTTAGCAGAGAGTACACCATCAATCTACACAAGCGTTTGCATGGCTGTACCTTCAAGAAGAAGGCTCCCAAGGCCATCAAAGAGATAAGGAAGTTTGCTGAGAAAGCAATGGGAACTAAGGATGTCAGAGTGGACGTGAAACTGAACAAGCATATTTGGAGCAGAGGAATTCGAAGTGTTCCAAGGAGAATTAGAGTTCGAATTGCACGCAAGAGGAACGATGATGAAGATGCAAAGGAAGAACTGTATTCTCTCGTAACCGTAGCAGAAATTCCAGCAGAAGGTTTGAAAGGATTAGGCACTAAGGTCATCGATGATGAAGAAGATTGA

Protein sequence

MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEED
Homology
[Close]
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match: XP_004135690.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis sativus] >KGN66205.1 hypothetical protein Csa_1G580200 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 2.8e-59
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match: XP_008450816.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928011.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022928015.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022960857.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_023516766.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo] >XP_023516767.1 60S ribosomal protein L31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-58
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVID+E+
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match: XP_012442834.1 (PREDICTED: 60S ribosomal protein L31 [Gossypium raimondii] >XP_012442836.1 PREDICTED: 60S ribosomal protein L31 [Gossypium raimondii] >XP_016750076.1 PREDICTED: 60S ribosomal protein L31-like [Gossypium hirsutum] >XP_016689902.1 PREDICTED: 60S ribosomal protein L31-like [Gossypium hirsutum] >KJB54304.1 hypothetical protein B456_009G029900 [Gossypium raimondii] >KJB54305.1 hypothetical protein B456_009G029900 [Gossypium raimondii])

HSP 1 Score: 232.3 bits (591), Expect = 9.0e-58
Identity = 117/121 (96.69%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDD+E
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match: XP_022987909.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EIPAEGLKGLGTKVID+E+
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match: XP_016754654.1 (PREDICTED: 60S ribosomal protein L31 [Gossypium hirsutum])

HSP 1 Score: 231.1 bits (588), Expect = 2.0e-57
Identity = 116/121 (95.87%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDD++
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_UNG050350 vs. TAIR10
Match: AT2G19740.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 203.4 bits (516), Expect = 8.1e-53
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVV+REYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI++EE
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of CsaV3_UNG050350 vs. TAIR10
Match: AT5G56710.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-52
Identity = 100/119 (84.03%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI++E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CsaV3_UNG050350 vs. TAIR10
Match: AT4G26230.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-52
Identity = 99/119 (83.19%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVV+REYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+I++E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match: sp|P46290|RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVV+REYTINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+I+DE+
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match: sp|Q9M573|RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 0 

Query: 5   TKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKHI 64
           +K RKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VID+EE
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match: sp|Q9MAV7|RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.0e-54
Identity = 105/121 (86.78%), Postives = 116/121 (95.87%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++I++++
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match: sp|Q9SLL7|RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.5e-51
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVV+REYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI++EE
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match: sp|P51420|RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-51
Identity = 100/119 (84.03%), Postives = 111/119 (93.28%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV++REYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVI++E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match: tr|A0A0A0LWD2|A0A0A0LWD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580200 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-59
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120

Query: 121 D 122
           D
Sbjct: 121 D 121

[Close]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match: tr|A0A1S3BR53|A0A1S3BR53_CUCME (60S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.6e-58
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVID+E+
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDEED 120

[Close]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match: tr|A0A1U8PFS0|A0A1U8PFS0_GOSHI (60S ribosomal protein L31-like OS=Gossypium hirsutum OX=3635 GN=LOC107958738 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.0e-58
Identity = 117/121 (96.69%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDD+E
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match: tr|A0A0D2TCF5|A0A0D2TCF5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G029900 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.0e-58
Identity = 117/121 (96.69%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDD+E
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDE 120

Query: 121 D 122
           +
Sbjct: 121 E 121

[Close]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match: tr|A0A1U8PWK0|A0A1U8PWK0_GOSHI (60S ribosomal protein L31 OS=Gossypium hirsutum OX=3635 GN=LOC107962688 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-57
Identity = 116/121 (95.87%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60
           MVEKT+GRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTRGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDEE 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDD++
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDDD 120

Query: 121 D 122
           +
Sbjct: 121 E 121

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG050350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135690.12.8e-59100.00PREDICTED: 60S ribosomal protein L31 [Cucumis sativus] >KGN66205.1 hypothetical ... [more]
XP_008450816.16.9e-5898.33PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022928007.1 60S ribosoma... [more]
XP_012442834.19.0e-5896.69PREDICTED: 60S ribosomal protein L31 [Gossypium raimondii] >XP_012442836.1 PREDI... [more]
XP_022987909.11.5e-5797.5060S ribosomal protein L31-like [Cucurbita maxima][more]
XP_016754654.12.0e-5795.87PREDICTED: 60S ribosomal protein L31 [Gossypium hirsutum][more]
BLAST of CsaV3_UNG050350 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19740.18.1e-5385.71Ribosomal protein L31e family protein[more]
AT5G56710.11.1e-5284.03Ribosomal protein L31e family protein[more]
AT4G26230.12.4e-5283.19Ribosomal protein L31e family protein[more]
BLAST of CsaV3_UNG050350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P46290|RL31_NICGU1.3e-5590.0060S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
sp|Q9M573|RL31_PERFR2.4e-5493.1060S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
sp|Q9MAV7|RL31_PANGI7.0e-5486.7860S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1[more]
sp|Q9SLL7|RL311_ARATH1.5e-5185.7160S ribosomal protein L31-1 OS=Arabidopsis thaliana OX=3702 GN=RPL31A PE=3 SV=1[more]
sp|P51420|RL313_ARATH1.9e-5184.0360S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
BLAST of CsaV3_UNG050350 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LWD2|A0A0A0LWD2_CUCSA1.9e-59100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580200 PE=4 SV=1[more]
tr|A0A1S3BR53|A0A1S3BR53_CUCME4.6e-5898.3360S ribosomal protein L31 OS=Cucumis melo OX=3656 GN=LOC103492289 PE=4 SV=1[more]
tr|A0A1U8PFS0|A0A1U8PFS0_GOSHI6.0e-5896.6960S ribosomal protein L31-like OS=Gossypium hirsutum OX=3635 GN=LOC107958738 PE=... [more]
tr|A0A0D2TCF5|A0A0D2TCF5_GOSRA6.0e-5896.69Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G029900 PE=4 ... [more]
tr|A0A1U8PWK0|A0A1U8PWK0_GOSHI1.3e-5795.8760S ribosomal protein L31 OS=Gossypium hirsutum OX=3635 GN=LOC107962688 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR020052Ribosomal_L31e_CS
IPR023621Ribosomal_L31e_dom_sf
IPR000054Ribosomal_L31e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG050350.1CsaV3_UNG050350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 10..93
e-value: 1.4E-49
score: 180.7
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 11..92
e-value: 2.2E-42
score: 143.0
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 7..119
IPR000054Ribosomal protein L31ePRODOMPD006030coord: 3..64
e-value: 2.0E-27
score: 298.0
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 9..92
e-value: 1.55419E-31
score: 107.655
IPR023621Ribosomal protein L31e domain superfamilyGENE3DG3DSA:3.10.440.10coord: 8..120
e-value: 3.4E-52
score: 177.0
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILYSSF54575Ribosomal protein L31ecoord: 11..92
NoneNo IPR availablePANTHERPTHR10956:SF22SUBFAMILY NOT NAMEDcoord: 7..119
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 54..68

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG050350CSPI01G27810Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG050350Cucsa.288560Cucumber (Gy14) v1cgycucB449
CsaV3_UNG050350CmaCh10G006970Cucurbita maxima (Rimu)cmacucB0091
CsaV3_UNG050350CmoCh10G007240Cucurbita moschata (Rifu)cmocucB0081
CsaV3_UNG050350Cp4.1LG18g03640Cucurbita pepo (Zucchini)cpecucB0462
CsaV3_UNG050350Cp4.1LG04g10470Cucurbita pepo (Zucchini)cpecucB0850
CsaV3_UNG050350CsGy1G027040Cucumber (Gy14) v2cgybcucB036
CsaV3_UNG050350Carg12264Silver-seed gourdcarcucB0046
CsaV3_UNG050350MELO3C015438Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG050350MELO3C015438.2Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG050350Cla97C03G066150Watermelon (97103) v2cucwmbB350
CsaV3_UNG050350Bhi02G001595Wax gourdcucwgoB441
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG050350CsaV3_1G040080Cucumber (Chinese Long) v3cuccucB033
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG050350Silver-seed gourdcarcucB0112
CsaV3_UNG050350Cucurbita maxima (Rimu)cmacucB0154
CsaV3_UNG050350Cucurbita moschata (Rifu)cmocucB0139
CsaV3_UNG050350Bottle gourd (USVL1VR-Ls)cuclsiB343
CsaV3_UNG050350Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG050350Watermelon (97103) v1cucwmB383