CsaV3_UNG046340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG046340
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionZinc finger CCCH domain-containing protein
Locationscaffold72 : 15879 .. 16636 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATCAGTGAACGACACCGTCCTGGTCCGGTGGTTCACATCACTCCATTGACTATACCGGAGGAACCTACGGCAACCGAGACGCGGTTTCCTTATCCTTTGAGTGAATCTCGGTTAGTTCTGATGGCAATGCCAATGGCGGTGATTATTCTCCTTATTATCTTCAGGAAGCTTTAGCGGCACTTCAGCGGTATACGAATGAGTCGGAGATTGAGTCTGATTCGGAGTTGTCTGGACGGGAAGCGGACGTTCCGTTGAATGCTTATTCGTGTGATCATTTTCGGATTTTTGAGTTCAAGGTGAGGAAGTGTACTCGTGGACGTTCTCATGATTGGACGGAGTGTCCGTACGCTCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGGAAGTATCATTACTCTGGTACGGCGTGTCCCGATTTTCGTAAAGGTAGCTGTAAGAAAGGGGATTCATGCGAGTTTGCGCATGGTGTTTTTGAGTGTTGGCTTCATCCTGCTCGTTACAGGACTCAGCCGTGTAAAGATGGAACCAACTGTAGAAGGAGAGTCTGTTTCTTCGCTCATACTCCTGAACAACTTAGGGTTTTGCCTCAGCAGAGTCCGAGAAGCGCGAATTCGCCTGACTCGTATGATGAATCTCCTCTTCGGCAGTCTGTGGATGGATCCTGTTCTAAAACGCTGCCGTTTCTGTCCTCTCCTGTGTCTGTCTCACCGACAGCGACTCCGGTGGACTCACCCCCGTTATCCCCATGA

mRNA sequence

ATGTTAATCAGTGAACGACACCGTCCTGGTCCGGTGGTTCACATCACTCCATTGACTATACCGGAGGAACCTACGGCAACCGAGACGCGGTTTCCTTATCCTTTGAGTGAATCTCGGTTAGTTCTGATGGCAATGCCAATGGCGGAAGCTTTAGCGGCACTTCAGCGGTATACGAATGAGTCGGAGATTGAGTCTGATTCGGAGTTGTCTGGACGGGAAGCGGACGTTCCGTTGAATGCTTATTCGTGTGATCATTTTCGGATTTTTGAGTTCAAGGTGAGGAAGTGTACTCGTGGACGTTCTCATGATTGGACGGAGTGTCCGTACGCTCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGGAAGTATCATTACTCTGGTACGGCGTGTCCCGATTTTCGTAAAGGTAGCTGTAAGAAAGGGGATTCATGCGAGTTTGCGCATGGTGTTTTTGAGTGTTGGCTTCATCCTGCTCGTTACAGGACTCAGCCGTGTAAAGATGGAACCAACTGTAGAAGGAGAGTCTGTTTCTTCGCTCATACTCCTGAACAACTTAGGGTTTTGCCTCAGCAGAGTCCGAGAAGCGCGAATTCGCCTGACTCGTATGATGAATCTCCTCTTCGGCAGTCTGTGGATGGATCCTGTTCTAAAACGCTGCCGTTTCTGTCCTCTCCTGTGTCTGTCTCACCGACAGCGACTCCGGTGGACTCACCCCCGTTATCCCCATGA

Coding sequence (CDS)

ATGTTAATCAGTGAACGACACCGTCCTGGTCCGGTGGTTCACATCACTCCATTGACTATACCGGAGGAACCTACGGCAACCGAGACGCGGTTTCCTTATCCTTTGAGTGAATCTCGGTTAGTTCTGATGGCAATGCCAATGGCGGAAGCTTTAGCGGCACTTCAGCGGTATACGAATGAGTCGGAGATTGAGTCTGATTCGGAGTTGTCTGGACGGGAAGCGGACGTTCCGTTGAATGCTTATTCGTGTGATCATTTTCGGATTTTTGAGTTCAAGGTGAGGAAGTGTACTCGTGGACGTTCTCATGATTGGACGGAGTGTCCGTACGCTCATCCCGGCGAGAAGGCTCGCCGGAGGGATCCGAGGAAGTATCATTACTCTGGTACGGCGTGTCCCGATTTTCGTAAAGGTAGCTGTAAGAAAGGGGATTCATGCGAGTTTGCGCATGGTGTTTTTGAGTGTTGGCTTCATCCTGCTCGTTACAGGACTCAGCCGTGTAAAGATGGAACCAACTGTAGAAGGAGAGTCTGTTTCTTCGCTCATACTCCTGAACAACTTAGGGTTTTGCCTCAGCAGAGTCCGAGAAGCGCGAATTCGCCTGACTCGTATGATGAATCTCCTCTTCGGCAGTCTGTGGATGGATCCTGTTCTAAAACGCTGCCGTTTCTGTCCTCTCCTGTGTCTGTCTCACCGACAGCGACTCCGGTGGACTCACCCCCGTTATCCCCATGA

Protein sequence

MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLMAMPMAEALAALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPTATPVDSPPLSP
Homology
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BLAST of CsaV3_UNG046340 vs. NCBI nr
Match: XP_004135688.1 (PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus])

HSP 1 Score: 456.8 bits (1174), Expect = 4.5e-125
Identity = 221/242 (91.32%), Postives = 223/242 (92.15%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEAL 60
           MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLS   +               + EAL
Sbjct: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSGISVSSDGNANGGDYSPYYLQEAL 60

Query: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120
           AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH
Sbjct: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120

Query: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180
           PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN
Sbjct: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180

Query: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 234
           CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP
Sbjct: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 240

[Close]
BLAST of CsaV3_UNG046340 vs. NCBI nr
Match: NP_001315383.1 (zinc finger CCCH domain-containing protein 49-like [Cucumis melo] >AGL76984.1 zinc finger CCCH domain-containing protein [Cucumis melo])

HSP 1 Score: 444.1 bits (1141), Expect = 3.0e-121
Identity = 212/239 (88.70%), Postives = 219/239 (91.63%), Query Frame = 0 

Query: 2   LISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEALA 61
           +ISERHRPGPVVHITPLTIPEEPTATETRFPYPLS   +               + EALA
Sbjct: 5   VISERHRPGPVVHITPLTIPEEPTATETRFPYPLSGISVSSDGNANGGDYSPYYLQEALA 64

Query: 62  ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 121
           ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP
Sbjct: 65  ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 124

Query: 122 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 181
           GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC
Sbjct: 125 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 184

Query: 182 RRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 232
           RRRVCFFAHTPEQLRVLPQQSPRSANSP+SYDESPLRQSVDG CSK++PF+SSPVSVSP
Sbjct: 185 RRRVCFFAHTPEQLRVLPQQSPRSANSPESYDESPLRQSVDGPCSKSMPFMSSPVSVSP 243

[Close]
BLAST of CsaV3_UNG046340 vs. NCBI nr
Match: XP_023516367.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.6 bits (1080), Expect = 3.6e-114
Identity = 201/240 (83.75%), Postives = 217/240 (90.42%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEAL 60
           M+I ERHRPGPVVHITPLTIPEEP A+ETRFPYPLS   +            +  + EAL
Sbjct: 1   MIIGERHRPGPVVHITPLTIPEEP-ASETRFPYPLSGISVSSDGNGNGGDYSSYYLKEAL 60

Query: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120
           AALQRYTNESEIESDSELSGRE+DVP++AYSCD+FRIFEFKVRKCTRGRSHDWTECP+AH
Sbjct: 61  AALQRYTNESEIESDSELSGRESDVPVDAYSCDNFRIFEFKVRKCTRGRSHDWTECPFAH 120

Query: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180
           PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN
Sbjct: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180

Query: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 232
           CRRRVCFFAHTPEQLRVLPQQSPRSA SP+ +DESP+RQ +DGSC+K+LPFLSSPVSVSP
Sbjct: 181 CRRRVCFFAHTPEQLRVLPQQSPRSAYSPEPFDESPVRQCLDGSCAKSLPFLSSPVSVSP 239

[Close]
BLAST of CsaV3_UNG046340 vs. NCBI nr
Match: XP_022961034.1 (zinc finger CCCH domain-containing protein 20 [Cucurbita moschata])

HSP 1 Score: 417.2 bits (1071), Expect = 4.0e-113
Identity = 200/240 (83.33%), Postives = 215/240 (89.58%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEAL 60
           M+I ERHRPGPVVHITPLTIPEEP A+ETRFPYPLS   +            +  + EAL
Sbjct: 1   MIIGERHRPGPVVHITPLTIPEEP-ASETRFPYPLSGISVSSDGNGNGGDYSSYYLKEAL 60

Query: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120
           AALQRY NESEIESDSELSGRE+DVP++AYSCD+FRIFEFKVRKCTRGRSHDWTECP+AH
Sbjct: 61  AALQRYANESEIESDSELSGRESDVPVDAYSCDNFRIFEFKVRKCTRGRSHDWTECPFAH 120

Query: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180
           PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKD TN
Sbjct: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDETN 180

Query: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 232
           CRRRVCFFAHTPEQLRVLPQQSPRSA SP+ YDESP+RQ +DGSC+K+LPFLSSPVSVSP
Sbjct: 181 CRRRVCFFAHTPEQLRVLPQQSPRSAYSPEPYDESPVRQCLDGSCAKSLPFLSSPVSVSP 239

[Close]
BLAST of CsaV3_UNG046340 vs. NCBI nr
Match: XP_022987756.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 2.6e-112
Identity = 198/240 (82.50%), Postives = 215/240 (89.58%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEAL 60
           M+I ERHRPGPVVHITPLTIPEEP A+ETRF YPLS   +            +  + EAL
Sbjct: 1   MIIGERHRPGPVVHITPLTIPEEP-ASETRFTYPLSGISVSSDGNANGGDYSSYYLKEAL 60

Query: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120
           AALQRYTN SEIESDSELSGRE+DVP++AYSCD+FRIFEFKVRKCTRGRSHDWTECP+AH
Sbjct: 61  AALQRYTNVSEIESDSELSGRESDVPVDAYSCDNFRIFEFKVRKCTRGRSHDWTECPFAH 120

Query: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180
           PGEKARRRDPRKYHYSGTACPDFRKG+CKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN
Sbjct: 121 PGEKARRRDPRKYHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180

Query: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 232
           CRRRVCFFAHTPEQLRVLPQQSPRSA SP+ YDESP+RQ +DGSC+K++PFLSSPVSVSP
Sbjct: 181 CRRRVCFFAHTPEQLRVLPQQSPRSAYSPEPYDESPVRQCLDGSCAKSMPFLSSPVSVSP 239

[Close]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match: AT2G19810.1 (CCCH-type zinc finger family protein)

HSP 1 Score: 277.7 bits (709), Expect = 6.8e-75
Identity = 141/238 (59.24%), Postives = 171/238 (71.85%), Query Frame = 0 

Query: 1   MLISERHRP-GPVVHITPLTIPEEPTATETRFPYPLSESRLVLMAMPMAEALAALQRY-- 60
           M+I E HR   P VHI P  + E+ T ++  +  P   S        M EALA LQRY  
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDI-YGSPDGGS-------SMMEALAELQRYLP 60

Query: 61  TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKAR 120
           +NE + +SD +LSG   D P++AY+CDHFR++EFKVR+C RGRSHDWTECPYAHPGEKAR
Sbjct: 61  SNEPDPDSDPDLSG--PDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKAR 120

Query: 121 RRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVC 180
           RRDPRK+HYSGTACP+FRKG CK+GD+CEF+HGVFECWLHPARYRTQPCKDG NCRRRVC
Sbjct: 121 RRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVC 180

Query: 181 FFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPTATP 236
           FFAH+P+Q+RVLP QSP   +  DS+D       +  +  +   F  SP S SP  +P
Sbjct: 181 FFAHSPDQIRVLPNQSP---DRVDSFD------VLSPTIRRAFQFSISPSSNSPPVSP 219

[Close]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 267.3 bits (682), Expect = 9.2e-72
Identity = 128/191 (67.02%), Postives = 144/191 (75.39%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLMAMPMAEALAALQRY--T 60
           M+I E  R  P V I P  + EE T +E   P   S          M EALA LQRY  +
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEELTTSEFFSPVMNSPD------CSMLEALAGLQRYLPS 60

Query: 61  NESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARR 120
           NE + ES  +L G   D P++AYSCDHFR+++FKVR+C RGRSHDWTECPYAHPGEKARR
Sbjct: 61  NEPDPESYPDLLG--PDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARR 120

Query: 121 RDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCF 180
           RDPRKYHYSGTACPDFRKG CKKGDSCEFAHGVFECWLHPARYRTQPCKDG NC R++CF
Sbjct: 121 RDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICF 180

Query: 181 FAHTPEQLRVL 190
           FAH+P+QLR L
Sbjct: 181 FAHSPDQLRFL 183

[Close]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 251.9 bits (642), Expect = 4.0e-67
Identity = 134/252 (53.17%), Postives = 169/252 (67.06%), Query Frame = 0 

Query: 1   MLISE-RHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLM------AMPMAEALAA 60
           M+I E ++RP P +HI       +PTAT      P S   L  +        P  ++ A+
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTAT---ISSPFSSVNLNSVNDYPHSPSPYLDSFAS 60

Query: 61  LQRYTNESEIESDSELSGREADVPL-NAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 120
           L RY   +E+ +DS+ S  +   PL +++S D FRI+EFK+R+C RGRSHDWTECP+AHP
Sbjct: 61  LFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHP 120

Query: 121 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 180
           GEKARRRDPRK+HYSGTACP+FRKGSC++GDSCEF+HGVFECWLHP+RYRTQPCKDGT+C
Sbjct: 121 GEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSC 180

Query: 181 RRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPT 240
           RRR+CFFAHT EQLRVLP      +  PD    S L  S             + + VSP+
Sbjct: 181 RRRICFFAHTTEQLRVLP-----CSLDPDLGFFSGLATS------------PTSILVSPS 232

Query: 241 -ATPVDSPPLSP 244
            + P +SPPLSP
Sbjct: 241 FSPPSESPPLSP 232

[Close]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 209.1 bits (531), Expect = 3.0e-54
Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = 0 

Query: 81  YSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRK-GSC 140
           Y+ DHFR+FEFK+R+CTR RSHDWT+CP+AHPGEKARRRDPR++ YSG  CP+FR+ G C
Sbjct: 78  YASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDC 137

Query: 141 KKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSAN- 200
            +GD CEFAHGVFECWLHP RYRT+ CKDG +C+R+VCFFAH+P QLRVLP ++    + 
Sbjct: 138 SRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGVSA 197

Query: 201 SPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPTATPVDSPPLSP 244
           SP    ++P       S + TL    S +S SP+     SPP+SP
Sbjct: 198 SPSPAAKNPCCLFCSSSPTSTLLGNLSHLSRSPSL----SPPMSP 238

[Close]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match: AT5G44260.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein)

HSP 1 Score: 203.0 bits (515), Expect = 2.1e-52
Identity = 105/215 (48.84%), Postives = 138/215 (64.19%), Query Frame = 0 

Query: 39  RLVLMAMPMAEALAALQRYTNESE--IESDSELSGREADVPLNAYSCDHFRIFEFKVRKC 98
           +L+  A   +   + L+ Y  + +   +SDSE          + Y+ DHFR++EFK+R+C
Sbjct: 22  KLLSSAKSPSSVSSPLRDYKEQKDYCYDSDSE----------DPYAGDHFRMYEFKIRRC 81

Query: 99  TRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDF-RKGSCKKGDSCEFAHGVFECW 158
           TR RSHDWT+CP++HPGEKARRRDPR++HY+G  CP+F R G C +GD C FAHGVFECW
Sbjct: 82  TRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFECW 141

Query: 159 LHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQ-----SPRSANSPDSYDESPLRQ 218
           LHP+RYRT+ CKDG +C+R+VCFFAH+P QLRVLP       S     SP S   S L  
Sbjct: 142 LHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPSPENHISGGCGGSPSSSPASVLSN 201

Query: 219 SVDGSCSKTLPFLSSPVS--VSPTATPVDSPPLSP 244
             +  C   L    SP S  ++ + +P  SPPLSP
Sbjct: 202 KNNRCC---LFCSHSPTSTLLNLSRSPSSSPPLSP 223

[Close]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match: sp|O82199|C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.2e-73
Identity = 141/238 (59.24%), Postives = 171/238 (71.85%), Query Frame = 0 

Query: 1   MLISERHRP-GPVVHITPLTIPEEPTATETRFPYPLSESRLVLMAMPMAEALAALQRY-- 60
           M+I E HR   P VHI P  + E+ T ++  +  P   S        M EALA LQRY  
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSEDLTVSDI-YGSPDGGS-------SMMEALAELQRYLP 60

Query: 61  TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKAR 120
           +NE + +SD +LSG   D P++AY+CDHFR++EFKVR+C RGRSHDWTECPYAHPGEKAR
Sbjct: 61  SNEPDPDSDPDLSG--PDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKAR 120

Query: 121 RRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVC 180
           RRDPRK+HYSGTACP+FRKG CK+GD+CEF+HGVFECWLHPARYRTQPCKDG NCRRRVC
Sbjct: 121 RRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVC 180

Query: 181 FFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPTATP 236
           FFAH+P+Q+RVLP QSP   +  DS+D       +  +  +   F  SP S SP  +P
Sbjct: 181 FFAHSPDQIRVLPNQSP---DRVDSFD------VLSPTIRRAFQFSISPSSNSPPVSP 219

[Close]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match: sp|Q9M0G2|C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.7e-70
Identity = 128/191 (67.02%), Postives = 144/191 (75.39%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLMAMPMAEALAALQRY--T 60
           M+I E  R  P V I P  + EE T +E   P   S          M EALA LQRY  +
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEELTTSEFFSPVMNSPD------CSMLEALAGLQRYLPS 60

Query: 61  NESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARR 120
           NE + ES  +L G   D P++AYSCDHFR+++FKVR+C RGRSHDWTECPYAHPGEKARR
Sbjct: 61  NEPDPESYPDLLG--PDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARR 120

Query: 121 RDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCF 180
           RDPRKYHYSGTACPDFRKG CKKGDSCEFAHGVFECWLHPARYRTQPCKDG NC R++CF
Sbjct: 121 RDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICF 180

Query: 181 FAHTPEQLRVL 190
           FAH+P+QLR L
Sbjct: 181 FAHSPDQLRFL 183

[Close]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match: sp|O82307|C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 7.2e-66
Identity = 134/252 (53.17%), Postives = 169/252 (67.06%), Query Frame = 0 

Query: 1   MLISE-RHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLM------AMPMAEALAA 60
           M+I E ++RP P +HI       +PTAT      P S   L  +        P  ++ A+
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTAT---ISSPFSSVNLNSVNDYPHSPSPYLDSFAS 60

Query: 61  LQRYTNESEIESDSELSGREADVPL-NAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 120
           L RY   +E+ +DS+ S  +   PL +++S D FRI+EFK+R+C RGRSHDWTECP+AHP
Sbjct: 61  LFRYLPSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHP 120

Query: 121 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 180
           GEKARRRDPRK+HYSGTACP+FRKGSC++GDSCEF+HGVFECWLHP+RYRTQPCKDGT+C
Sbjct: 121 GEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSC 180

Query: 181 RRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPT 240
           RRR+CFFAHT EQLRVLP      +  PD    S L  S             + + VSP+
Sbjct: 181 RRRICFFAHTTEQLRVLP-----CSLDPDLGFFSGLATS------------PTSILVSPS 232

Query: 241 -ATPVDSPPLSP 244
            + P +SPPLSP
Sbjct: 241 FSPPSESPPLSP 232

[Close]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match: sp|Q9FU27|C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.6e-65
Identity = 113/155 (72.90%), Postives = 130/155 (83.87%), Query Frame = 0 

Query: 51  LAALQRY--TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECP 110
           +AAL+ Y   N+  + +D E         ++AY+CD FR++EFKVR+C RGRSHDWTECP
Sbjct: 40  IAALRDYLPANDVGVGADEEXXXXAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECP 99

Query: 111 YAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKD 170
           +AHPGEKARRRDPRKYHYSGTACPDFRKG CK+GD+CE+AHGVFECWLHPARYRTQPCKD
Sbjct: 100 FAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKD 159

Query: 171 GTNCRRRVCFFAHTPEQLRVLP--QQSPRS-ANSP 201
           GT CRRRVCFFAHTP+QLRVLP  Q SPRS A+SP
Sbjct: 160 GTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSP 194

[Close]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match: sp|Q6L4N4|C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-63
Identity = 107/144 (74.31%), Postives = 120/144 (83.33%), Query Frame = 0 

Query: 79  NAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGS 138
           +AY+CD FR++EFKVR+C RGRSHDWTECP+AHPGEKARRRDPR+Y YSGTACPDFRKG 
Sbjct: 71  DAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGG 130

Query: 139 CKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCRRRVCFFAHTPEQLRVLPQQSPRSAN 198
           CK+GD+CEFAHGVFECWLHPARYRTQPCKDGT CRRRVCFFAHTP+QLRVLP    + +N
Sbjct: 131 CKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQGSN 190

Query: 199 SP-------DSYDESPLRQSVDGS 216
           SP            SPL +S DGS
Sbjct: 191 SPRGCXXXXXXXXXSPLAESYDGS 214

[Close]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match: tr|A0A1S3BQ41|A0A1S3BQ41_CUCME (zinc finger CCCH domain-containing protein 49-like OS=Cucumis melo OX=3656 GN=LOC103492287 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 8.1e-123
Identity = 215/241 (89.21%), Postives = 221/241 (91.70%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEAL 60
           MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLS   +               + EAL
Sbjct: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSGISVSSDGNANGGDYSPYYLQEAL 60

Query: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120
           AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH
Sbjct: 61  AALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAH 120

Query: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180
           PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN
Sbjct: 121 PGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTN 180

Query: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 233
           CRRRVCFFAHTPEQLRVLPQQSPRSANSP+SYDESPLRQSVDG CSK++PF+SSPVSVSP
Sbjct: 181 CRRRVCFFAHTPEQLRVLPQQSPRSANSPESYDESPLRQSVDGPCSKSMPFMSSPVSVSP 240

[Close]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match: tr|R4QQJ8|R4QQJ8_CUCME (Zinc finger CCCH domain-containing protein OS=Cucumis melo OX=3656 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.0e-121
Identity = 212/239 (88.70%), Postives = 219/239 (91.63%), Query Frame = 0 

Query: 2   LISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLV---------LMAMPMAEALA 61
           +ISERHRPGPVVHITPLTIPEEPTATETRFPYPLS   +               + EALA
Sbjct: 5   VISERHRPGPVVHITPLTIPEEPTATETRFPYPLSGISVSSDGNANGGDYSPYYLQEALA 64

Query: 62  ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 121
           ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP
Sbjct: 65  ALQRYTNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHP 124

Query: 122 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 181
           GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC
Sbjct: 125 GEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNC 184

Query: 182 RRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSP 232
           RRRVCFFAHTPEQLRVLPQQSPRSANSP+SYDESPLRQSVDG CSK++PF+SSPVSVSP
Sbjct: 185 RRRVCFFAHTPEQLRVLPQQSPRSANSPESYDESPLRQSVDGPCSKSMPFMSSPVSVSP 243

[Close]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match: tr|A5C465|A5C465_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013303 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 3.0e-93
Identity = 167/245 (68.16%), Postives = 196/245 (80.00%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLMA------------MPMA 60
           M+I E  RP P V + P    ++PT  +  FPYP+S   +   A              + 
Sbjct: 41  MMIGESRRPNPTVLVPPWPHFDDPT-VDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 100

Query: 61  EALAALQRY--TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTE 120
           EAL ALQRY  +N+ +++SDS++SGREAD+P++AYSCDHFR+FEFKVR+C RGRSHDWTE
Sbjct: 101 EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTE 160

Query: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPC 180
           CPYAHPGEKARRRDPRK+HYSGTACPDFRKG+CKKGDSCEFAHGVFECWLHPARYRTQPC
Sbjct: 161 CPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPC 220

Query: 181 KDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSP 232
           KDG NCRRRVCFFAHT EQLRVLPQQSPR+  S +SYD SPLRQ+++ SC+KTLPF+SSP
Sbjct: 221 KDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSP 280

[Close]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match: tr|F6HGX4|F6HGX4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g02790 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.1e-92
Identity = 166/245 (67.76%), Postives = 195/245 (79.59%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEEPTATETRFPYPLSESRLVLMA------------MPMA 60
           M+I E   P P V + P    ++PT  +  FPYP+S   +   A              + 
Sbjct: 1   MMIGESRHPNPTVLVPPWPHFDDPT-VDISFPYPVSGVSVNSNANANGLQGGEHSPFLLG 60

Query: 61  EALAALQRY--TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTE 120
           EAL ALQRY  +N+ +++SDS++SGREAD+P++AYSCDHFR+FEFKVR+C RGRSHDWTE
Sbjct: 61  EALTALQRYLPSNDVDVDSDSDISGREADIPVDAYSCDHFRMFEFKVRRCARGRSHDWTE 120

Query: 121 CPYAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPC 180
           CPYAHPGEKARRRDPRK+HYSGTACPDFRKG+CKKGDSCEFAHGVFECWLHPARYRTQPC
Sbjct: 121 CPYAHPGEKARRRDPRKFHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPC 180

Query: 181 KDGTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSP 232
           KDG NCRRRVCFFAHT EQLRVLPQQSPR+  S +SYD SPLRQ+++ SC+KTLPF+SSP
Sbjct: 181 KDGPNCRRRVCFFAHTAEQLRVLPQQSPRTPGSVESYDGSPLRQALEASCAKTLPFMSSP 240

[Close]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match: tr|A0A067KPP4|A0A067KPP4_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07335 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 1.5e-92
Identity = 166/240 (69.17%), Postives = 192/240 (80.00%), Query Frame = 0 

Query: 1   MLISERHRPGPVVHITPLTIPEE--PTATETRFPYPLSESRLVLM---AMPMAEALAALQ 60
           M++ ERHRP   VH+ P  + E+  P    +    P S +           + EALAALQ
Sbjct: 1   MMLDERHRPNTTVHVPPWALIEDANPEGYLSSQLSPHSGNAATASDYNPYYLQEALAALQ 60

Query: 61  RY--TNESEIESDSELSGREADVPLNAYSCDHFRIFEFKVRKCTRGRSHDWTECPYAHPG 120
           RY  +NE + +SDSE+SG E D P++A+SCDHFR+FEFKVR+C RGRSHDWTECPYAHPG
Sbjct: 61  RYLPSNEPDFDSDSEVSGLEPDSPVDAFSCDHFRMFEFKVRRCARGRSHDWTECPYAHPG 120

Query: 121 EKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDGTNCR 180
           EKARRRDPRKYHYSGTACPDFRKG+CKKGD+CEFAHGVFECWLHP RYRTQPCKDGTNCR
Sbjct: 121 EKARRRDPRKYHYSGTACPDFRKGNCKKGDACEFAHGVFECWLHPGRYRTQPCKDGTNCR 180

Query: 181 RRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSVDGSCSKTLPFLSSPVSVSPTA 234
           RRVCFFAHTPEQLRVLPQQSPRS NS +SYD SP RQ+++ SC+K+LPFLSSP S+SP A
Sbjct: 181 RRVCFFAHTPEQLRVLPQQSPRSVNSVESYDGSPFRQAIEASCAKSLPFLSSPGSISPPA 240

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG046340 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135688.14.5e-12591.32PREDICTED: zinc finger CCCH domain-containing protein 20-like [Cucumis sativus][more]
NP_001315383.13.0e-12188.70zinc finger CCCH domain-containing protein 49-like [Cucumis melo] >AGL76984.1 zi... [more]
XP_023516367.13.6e-11483.75zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo][more]
XP_022961034.14.0e-11383.33zinc finger CCCH domain-containing protein 20 [Cucurbita moschata][more]
XP_022987756.12.6e-11282.50zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima][more]
BLAST of CsaV3_UNG046340 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G19810.16.8e-7559.24CCCH-type zinc finger family protein[more]
AT4G29190.19.2e-7267.02Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT2G25900.14.0e-6753.17Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT1G03790.13.0e-5458.79Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
AT5G44260.12.1e-5248.84Zinc finger C-x8-C-x5-C-x3-H type family protein[more]
BLAST of CsaV3_UNG046340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O82199|C3H20_ARATH1.2e-7359.24Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9M0G2|C3H49_ARATH1.7e-7067.02Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|O82307|C3H23_ARATH7.2e-6653.17Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|Q9FU27|C3H2_ORYSJ3.6e-6572.90Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=... [more]
sp|Q6L4N4|C3H35_ORYSJ2.0e-6374.31Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX... [more]
BLAST of CsaV3_UNG046340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BQ41|A0A1S3BQ41_CUCME8.1e-12389.21zinc finger CCCH domain-containing protein 49-like OS=Cucumis melo OX=3656 GN=LO... [more]
tr|R4QQJ8|R4QQJ8_CUCME2.0e-12188.70Zinc finger CCCH domain-containing protein OS=Cucumis melo OX=3656 PE=2 SV=1[more]
tr|A5C465|A5C465_VITVI3.0e-9368.16Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_013303 PE=4 SV=1[more]
tr|F6HGX4|F6HGX4_VITVI1.1e-9267.76Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g02790 PE=4 SV=... [more]
tr|A0A067KPP4|A0A067KPP4_JATCU1.5e-9269.17Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07335 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG046340.1CsaV3_UNG046340.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 160..183
e-value: 10.0
score: 8.3
coord: 125..151
e-value: 8.0E-6
score: 35.4
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 130..150
e-value: 8.7E-7
score: 28.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 160..184
score: 7.066
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 77..114
score: 6.277
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 126..152
score: 13.854
NoneNo IPR availableGENE3DG3DSA:4.10.1000.10coord: 122..197
e-value: 8.6E-9
score: 37.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..243
NoneNo IPR availablePANTHERPTHR14493UNCHARACTERIZEDcoord: 69..216
NoneNo IPR availablePANTHERPTHR14493:SF74RING FINGER PROTEIN UNKEMPTcoord: 69..216
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILYSSF90229CCCH zinc fingercoord: 124..154