CsaV3_7G034460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G034460
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 21784610 .. 21785198 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTAATAATTGGTAAGTTCTTTCTAACAAATCAAATCCCACTGTAAAATTTTATAGGTTGAATTGATGAGAAAATTTTATAACCAACTTTATTTTGATAATGATTTAAAATTTTATTAAGAGATGGAATTTTATGTTTTATTTTATTAAAAAACAACAATAATAAGGGGAAAGGTCTAAACTCTCTTCTTCTCTTCTCAGTTCTTTTTCGAGAGCATTCTTCTTCTTCTTGGTGAAAGCAGACGCCCCCTCTCTCGACTTCTCTTCAGCTCACTATCTCTCGCACACCGGCTACGGCATAGATTTCCGTCAACAACCTGCCGAAAACCCCAACCCGATTTTCCCTCGCGCTTACCGTCTCCCTATCTCCTCCAGCCGACGTCATCACCTGCGGACTGGCATTGCGCCGTTCGACTCTCTTTCTCCTTGCGCCGCGCTCAAGAGTTCTCCGCCGTCGCATCAAACTCAGGAATCTGGCAGTAGCTTAGTTGTTCGCTCGCGTTGTGAAGTTCTTGTTTCATATTTGTCTTGTACGGCAGCTGTGAATACCGTGGCTCCGCCGTTCTCAGCTAAATTTTGGCTTTGA

mRNA sequence

ATGAGTTCTTTTTCGAGAGCATTCTTCTTCTTCTTGGTGAAAGCAGACGCCCCCTCTCTCGACTTCTCTTCAGCTCACTATCTCTCGCACACCGGCTACGGCATAGATTTCCGTCAACAACCTGCCGAAAACCCCAACCCGATTTTCCCTCGCGCTTACCGTCTCCCTATCTCCTCCAGCCGACGTCATCACCTGCGGACTGGCATTGCGCCGTTCGACTCTCTTTCTCCTTGCGCCGCGCTCAAGAGTTCTCCGCCGTCGCATCAAACTCAGGAATCTGGCAGTAGCTTAGTTGTTCGCTCGCGTTGTGAAGTTCTTGTTTCATATTTGTCTTGTACGGCAGCTGTGAATACCGTGGCTCCGCCGTTCTCAGCTAAATTTTGGCTTTGA

Coding sequence (CDS)

ATGAGTTCTTTTTCGAGAGCATTCTTCTTCTTCTTGGTGAAAGCAGACGCCCCCTCTCTCGACTTCTCTTCAGCTCACTATCTCTCGCACACCGGCTACGGCATAGATTTCCGTCAACAACCTGCCGAAAACCCCAACCCGATTTTCCCTCGCGCTTACCGTCTCCCTATCTCCTCCAGCCGACGTCATCACCTGCGGACTGGCATTGCGCCGTTCGACTCTCTTTCTCCTTGCGCCGCGCTCAAGAGTTCTCCGCCGTCGCATCAAACTCAGGAATCTGGCAGTAGCTTAGTTGTTCGCTCGCGTTGTGAAGTTCTTGTTTCATATTTGTCTTGTACGGCAGCTGTGAATACCGTGGCTCCGCCGTTCTCAGCTAAATTTTGGCTTTGA

Protein sequence

MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSSRRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVAPPFSAKFWL
Homology
[Close]
BLAST of CsaV3_7G034460 vs. NCBI nr
Match: KGN45489.1 (hypothetical protein Csa_7G450480 [Cucumis sativus])

HSP 1 Score: 261.5 bits (667), Expect = 1.5e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS 60
           MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS
Sbjct: 1   MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS 60

Query: 61  RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA 120
           RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA
Sbjct: 61  RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA 120

Query: 121 PPFSAKFWL 130
           PPFSAKFWL
Sbjct: 121 PPFSAKFWL 129

[Close]
BLAST of CsaV3_7G034460 vs. TrEMBL
Match: tr|A0A0A0K9H2|A0A0A0K9H2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450480 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 9.8e-67
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS 60
           MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS
Sbjct: 1   MSSFSRAFFFFLVKADAPSLDFSSAHYLSHTGYGIDFRQQPAENPNPIFPRAYRLPISSS 60

Query: 61  RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA 120
           RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA
Sbjct: 61  RRHHLRTGIAPFDSLSPCAALKSSPPSHQTQESGSSLVVRSRCEVLVSYLSCTAAVNTVA 120

Query: 121 PPFSAKFWL 130
           PPFSAKFWL
Sbjct: 121 PPFSAKFWL 129

The following BLAST results are available for this feature:
BLAST of CsaV3_7G034460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45489.11.5e-66100.00hypothetical protein Csa_7G450480 [Cucumis sativus][more]
BLAST of CsaV3_7G034460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G034460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G034460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9H2|A0A0A0K9H2_CUCSA9.8e-67100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450480 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G034460.1CsaV3_7G034460.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G034460Cucumber (Chinese Long) v3cuccucB058
CsaV3_7G034460Cucumber (Chinese Long) v3cuccucB190
CsaV3_7G034460Silver-seed gourdcarcucB0113
CsaV3_7G034460Silver-seed gourdcarcucB0138
CsaV3_7G034460Silver-seed gourdcarcucB0234
CsaV3_7G034460Silver-seed gourdcarcucB0639
CsaV3_7G034460Silver-seed gourdcarcucB0927
CsaV3_7G034460Silver-seed gourdcarcucB1073
CsaV3_7G034460Cucumber (Gy14) v2cgybcucB052
CsaV3_7G034460Cucumber (Gy14) v2cgybcucB197
CsaV3_7G034460Cucumber (Gy14) v2cgybcucB347
CsaV3_7G034460Cucumber (Gy14) v1cgycucB215
CsaV3_7G034460Cucumber (Gy14) v1cgycucB550
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0055
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0098
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0179
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0318
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0456
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0587
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB0593
CsaV3_7G034460Cucurbita maxima (Rimu)cmacucB1089
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0042
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0089
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0164
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0313
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0449
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB0576
CsaV3_7G034460Cucurbita moschata (Rifu)cmocucB1071
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0181
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0415
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0466
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0734
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0737
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0790
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0865
CsaV3_7G034460Cucurbita pepo (Zucchini)cpecucB0994
CsaV3_7G034460Wild cucumber (PI 183967)cpicucB062
CsaV3_7G034460Wild cucumber (PI 183967)cpicucB250
CsaV3_7G034460Wild cucumber (PI 183967)cpicucB414
CsaV3_7G034460Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G034460Bottle gourd (USVL1VR-Ls)cuclsiB557
CsaV3_7G034460Bottle gourd (USVL1VR-Ls)cuclsiB564
CsaV3_7G034460Bottle gourd (USVL1VR-Ls)cuclsiB569
CsaV3_7G034460Melon (DHL92) v3.5.1cucmeB537
CsaV3_7G034460Melon (DHL92) v3.5.1cucmeB565
CsaV3_7G034460Melon (DHL92) v3.5.1cucmeB583
CsaV3_7G034460Melon (DHL92) v3.6.1cucmedB525
CsaV3_7G034460Melon (DHL92) v3.6.1cucmedB552
CsaV3_7G034460Melon (DHL92) v3.6.1cucmedB570
CsaV3_7G034460Watermelon (Charleston Gray)cucwcgB546
CsaV3_7G034460Watermelon (Charleston Gray)cucwcgB579
CsaV3_7G034460Watermelon (Charleston Gray)cucwcgB598
CsaV3_7G034460Watermelon (97103) v1cucwmB591
CsaV3_7G034460Watermelon (97103) v1cucwmB608
CsaV3_7G034460Watermelon (97103) v1cucwmB612
CsaV3_7G034460Watermelon (97103) v2cucwmbB557
CsaV3_7G034460Watermelon (97103) v2cucwmbB575
CsaV3_7G034460Watermelon (97103) v2cucwmbB592
CsaV3_7G034460Wax gourdcucwgoB725
CsaV3_7G034460Wax gourdcucwgoB715
CsaV3_7G034460Wax gourdcucwgoB740