CsaV3_7G030250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G030250
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 19150298 .. 19150504 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCTCTTTTGATGTTATTGAAGGCTTTAATGGGAGGCTATGGAGATGATGAAGATCTTGAAGGGAATGGTGGTGAATTTGAGAGGAAGGTTGATGGATTATCTGAGTTTGAGTTTTTGAGTTTGGGTGGTGGTGGAGATGAGGATGGAGAGGAGTTGAAGAAGATATGGAAGTTGCTTGGAGAAAACTGTCTTTGGCCTTGA

mRNA sequence

ATGTCGTCTCTTTTGATGTTATTGAAGGCTTTAATGGGAGGCTATGGAGATGATGAAGATCTTGAAGGGAATGGTGGTGAATTTGAGAGGAAGGTTGATGGATTATCTGAGTTTGAGTTTTTGAGTTTGGGTGGTGGTGGAGATGAGGATGGAGAGGAGTTGAAGAAGATATGGAAGTTGCTTGGAGAAAACTGTCTTTGGCCTTGA

Coding sequence (CDS)

ATGTCGTCTCTTTTGATGTTATTGAAGGCTTTAATGGGAGGCTATGGAGATGATGAAGATCTTGAAGGGAATGGTGGTGAATTTGAGAGGAAGGTTGATGGATTATCTGAGTTTGAGTTTTTGAGTTTGGGTGGTGGTGGAGATGAGGATGGAGAGGAGTTGAAGAAGATATGGAAGTTGCTTGGAGAAAACTGTCTTTGGCCTTGA

Protein sequence

MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKLLGENCLWP
Homology
[Close]
BLAST of CsaV3_7G030250 vs. NCBI nr
Match: KGN45042.1 (hypothetical protein Csa_7G414400 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 1.4e-31
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL 60
          MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL
Sbjct: 1  MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL 60

Query: 61 LGENCLWP 69
          LGENCLWP
Sbjct: 61 LGENCLWP 68

[Close]
BLAST of CsaV3_7G030250 vs. TrEMBL
Match: tr|A0A0A0K9K3|A0A0A0K9K3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414400 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.3e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL 60
          MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL
Sbjct: 1  MSSLLMLLKALMGGYGDDEDLEGNGGEFERKVDGLSEFEFLSLGGGGDEDGEELKKIWKL 60

Query: 61 LGENCLWP 69
          LGENCLWP
Sbjct: 61 LGENCLWP 68

The following BLAST results are available for this feature:
BLAST of CsaV3_7G030250 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45042.11.4e-31100.00hypothetical protein Csa_7G414400 [Cucumis sativus][more]
BLAST of CsaV3_7G030250 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G030250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G030250 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9K3|A0A0A0K9K3_CUCSA9.3e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414400 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G030250.1CsaV3_7G030250.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G030250CSPI07G18410Wild cucumber (PI 183967)cpicucB414
CsaV3_7G030250Cp4.1LG17g07620Cucurbita pepo (Zucchini)cpecucB0422
CsaV3_7G030250MELO3C023631Melon (DHL92) v3.5.1cucmeB537
CsaV3_7G030250ClCG09G004830Watermelon (Charleston Gray)cucwcgB548
CsaV3_7G030250MELO3C023631.2Melon (DHL92) v3.6.1cucmedB525
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G030250Silver-seed gourdcarcucB0128
CsaV3_7G030250Silver-seed gourdcarcucB0486
CsaV3_7G030250Silver-seed gourdcarcucB0804
CsaV3_7G030250Silver-seed gourdcarcucB0858
CsaV3_7G030250Cucumber (Gy14) v2cgybcucB347
CsaV3_7G030250Cucumber (Gy14) v1cgycucB181
CsaV3_7G030250Cucurbita maxima (Rimu)cmacucB0317
CsaV3_7G030250Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G030250Cucurbita maxima (Rimu)cmacucB0595
CsaV3_7G030250Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G030250Cucurbita moschata (Rifu)cmocucB0312
CsaV3_7G030250Cucurbita moschata (Rifu)cmocucB0455
CsaV3_7G030250Cucurbita moschata (Rifu)cmocucB0582
CsaV3_7G030250Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G030250Cucurbita pepo (Zucchini)cpecucB0188
CsaV3_7G030250Cucurbita pepo (Zucchini)cpecucB0789
CsaV3_7G030250Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G030250Bottle gourd (USVL1VR-Ls)cuclsiB550
CsaV3_7G030250Melon (DHL92) v3.6.1cucmedB561
CsaV3_7G030250Watermelon (Charleston Gray)cucwcgB555
CsaV3_7G030250Watermelon (Charleston Gray)cucwcgB593
CsaV3_7G030250Watermelon (97103) v1cucwmB593
CsaV3_7G030250Watermelon (97103) v1cucwmB601
CsaV3_7G030250Watermelon (97103) v2cucwmbB536
CsaV3_7G030250Watermelon (97103) v2cucwmbB594
CsaV3_7G030250Wax gourdcucwgoB672
CsaV3_7G030250Wax gourdcucwgoB730