CsaV3_7G029410 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAACACATTATATTGTAAAATATCAAAACATGGCTCTCGCAAGGCAGCTGATCATCTCTGCAGCTCCTGTGCTGCTGCTGTGGCTGTTGGCCTCCGCTGACGTTTCTTCTGCCACGGACTATTATGGCTTTCCCGACATTGGTGATGCTGGAGTGCCGATCTACGATAAATCACTCCCGTCGTATGGCAGTGATGGGACGGTACCGCTCAGCATCGCTGTTGAAGGAGTTGTTTCTTGTAAAAATGGCAATAAATACCATCCTCTTAAAGGTAAGAGCTTTGTGTTTTTGTCTATAGCTATTATTTGGTTTTTTTAATACAAAAAGAACGTATTAACATGTAGTATATATTATATTTGGTGATTCAAGTCATTTGCGTTTCGATGATTATCAAATAAAGTATTTAATATTCTCCTAAATCATTTAATATCATTGTTACATAGACCTTCTAAGACTAGGTACTTAAGTTTTTGCATGAAATTCCAAAAGATCTCATTTCAAGGATAGTTTTGAAACATTTATATATGAAAGATTAGAGGATATTGCAACTTTTTAAAGTAATTAGAGTTTAAATTCATGGAAAAATGTTTTTTTTTTCTTTTGACAAATAGTTTAAACTCTCTTTAATTACTTGTAGGTATTGTAGCAAGATTCACATGTATGGCTTTGAACGAAAAAGGCAAAGAAATGGCTCCTTTTTCATTCTCAAGCTTTCCAAGCGACAACAATGGCTATTTCTTAGCCACACTGTCAGCTTCCAGGCTCAAAGGCAAAGCCAAAGTGACACAATGCAAAGCCTTCCTTCCTCCTTATTCTCCATATGGGGCCTGCAAATACCTTACCAACGTTAACGATGGCGTTGTTGGTGCTCTCTTTCGTTCTTTTCGCATTCTCCCACACAAGAAGATGAAGTTGTACTCTCTTGGATCCTTCTTCTATTCCTCACAACCAAATATATAATGCCTTAAGTTTTTATGATCATCTATATATACAATTTCAATTCATGTTTATTGTGTATTATTTTTGGTTTGTTGTTTTCCTTTTGGGTTTTATTTGTTGTTTCCATTTAGTTATTTCAATGGATGATCAGTCTGAAAAGAAGAAATGATTTAGATGTGTGTATAAGCTATTTAAGTTGTGTATTTCTCATTTTCTCATCAAGAAATTTATGTGTAATATTCTTTTTATTTCTCACAATTGTATTAAGTACCCAAATAAATCAATGGTATGAATTTTTAAG ATGGCTCTCGCAAGGCAGCTGATCATCTCTGCAGCTCCTGTGCTGCTGCTGTGGCTGTTGGCCTCCGCTGACGTTTCTTCTGCCACGGACTATTATGGCTTTCCCGACATTGGTGATGCTGGAGTGCCGATCTACGATAAATCACTCCCGTCGTATGGCAGTGATGGGACGGTACCGCTCAGCATCGCTGTTGAAGGAGTTGTTTCTTGTAAAAATGGCAATAAATACCATCCTCTTAAAGGTATTGTAGCAAGATTCACATGTATGGCTTTGAACGAAAAAGGCAAAGAAATGGCTCCTTTTTCATTCTCAAGCTTTCCAAGCGACAACAATGGCTATTTCTTAGCCACACTGTCAGCTTCCAGGCTCAAAGGCAAAGCCAAAGTGACACAATGCAAAGCCTTCCTTCCTCCTTATTCTCCATATGGGGCCTGCAAATACCTTACCAACGTTAACGATGGCGTTGTTGGTGCTCTCTTTCGTTCTTTTCGCATTCTCCCACACAAGAAGATGAAGTTGTACTCTCTTGGATCCTTCTTCTATTCCTCACAACCAAATATATAA ATGGCTCTCGCAAGGCAGCTGATCATCTCTGCAGCTCCTGTGCTGCTGCTGTGGCTGTTGGCCTCCGCTGACGTTTCTTCTGCCACGGACTATTATGGCTTTCCCGACATTGGTGATGCTGGAGTGCCGATCTACGATAAATCACTCCCGTCGTATGGCAGTGATGGGACGGTACCGCTCAGCATCGCTGTTGAAGGAGTTGTTTCTTGTAAAAATGGCAATAAATACCATCCTCTTAAAGGTATTGTAGCAAGATTCACATGTATGGCTTTGAACGAAAAAGGCAAAGAAATGGCTCCTTTTTCATTCTCAAGCTTTCCAAGCGACAACAATGGCTATTTCTTAGCCACACTGTCAGCTTCCAGGCTCAAAGGCAAAGCCAAAGTGACACAATGCAAAGCCTTCCTTCCTCCTTATTCTCCATATGGGGCCTGCAAATACCTTACCAACGTTAACGATGGCGTTGTTGGTGCTCTCTTTCGTTCTTTTCGCATTCTCCCACACAAGAAGATGAAGTTGTACTCTCTTGGATCCTTCTTCTATTCCTCACAACCAAATATATAA MALARQLIISAAPVLLLWLLASADVSSATDYYGFPDIGDAGVPIYDKSLPSYGSDGTVPLSIAVEGVVSCKNGNKYHPLKGIVARFTCMALNEKGKEMAPFSFSSFPSDNNGYFLATLSASRLKGKAKVTQCKAFLPPYSPYGACKYLTNVNDGVVGALFRSFRILPHKKMKLYSLGSFFYSSQPNI
BLAST of CsaV3_7G029410 vs. NCBI nr
Match: XP_011659365.1 (PREDICTED: proline-rich protein 3-like [Cucumis sativus] >KGN44954.1 hypothetical protein Csa_7G398160 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 1.2e-101 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. NCBI nr
Match: XP_008451554.1 (PREDICTED: proline-rich protein 3-like [Cucumis melo]) HSP 1 Score: 346.7 bits (888), Expect = 5.1e-92 Identity = 174/187 (93.05%), Postives = 175/187 (93.58%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. NCBI nr
Match: XP_023549401.1 (proline-rich protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.6 bits (714), Expect = 7.6e-72 Identity = 141/192 (73.44%), Postives = 157/192 (81.77%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. NCBI nr
Match: XP_022953718.1 (proline-rich protein 3-like [Cucurbita moschata]) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 138/189 (73.02%), Postives = 155/189 (82.01%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. NCBI nr
Match: XP_022991244.1 (proline-rich protein 3-like [Cucurbita maxima]) HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66 Identity = 134/192 (69.79%), Postives = 150/192 (78.12%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TAIR10
Match: AT4G02270.1 (root hair specific 13) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TAIR10
Match: AT2G47540.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22 Identity = 54/127 (42.52%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TAIR10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 84.3 bits (207), Expect = 8.5e-17 Identity = 59/175 (33.71%), Postives = 82/175 (46.86%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TrEMBL
Match: tr|A0A0A0K7U6|A0A0A0K7U6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398160 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 8.0e-102 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TrEMBL
Match: tr|A0A1S3BRP9|A0A1S3BRP9_CUCME (proline-rich protein 3-like OS=Cucumis melo OX=3656 GN=LOC103492799 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 3.3e-92 Identity = 174/187 (93.05%), Postives = 175/187 (93.58%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TrEMBL
Match: tr|A0A067JZL1|A0A067JZL1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13969 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 9.6e-31 Identity = 79/177 (44.63%), Postives = 109/177 (61.58%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TrEMBL
Match: tr|M5VZ84|M5VZ84_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G264800 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 8.1e-30 Identity = 86/189 (45.50%), Postives = 114/189 (60.32%), Query Frame = 0
BLAST of CsaV3_7G029410 vs. TrEMBL
Match: tr|A0A2I4EZD4|A0A2I4EZD4_9ROSI (uncharacterized protein LOC108994115 OS=Juglans regia OX=51240 GN=LOC108994115 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.9e-29 Identity = 68/150 (45.33%), Postives = 97/150 (64.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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