CsaV3_7G023750 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCCGTCCAAACAAACCTTTCCATTTCATCTGCCACCCCACGCGCAATCACTACCTCTTTTTTTTTCTTTTCATTTTTCCATTTCCTTTCTTTTTGTTCTCTCTTTAGTTTATATATATATGTTATCTTCTTTTATTCTTCTTCCATTCCAATTAACAACAATCTTCTTTACTTCTTCTCTTCTTCTATTTTCACATCAACACATCACAAAAGCATCTACAACATTTCTATGTGAGTTCATACAGTTATATATGTATCTATATCTATCTCTCCTTTCTCTCATTCCTTATTACATTAGGGTTTTCTTTTATTCCATCCATATTCTTTTCTCTGGGGTTCTATTATATGTACTTCAATATTGAGGGAAGAGAATATTATCGAATATGATTGTTTTAGAGTAATATGGAATGCGGTTTAACGTGCACTCATCTCCATATATTGTCAATCCATTTCAGTTGAGAAAACGAGTTCGTTTGTCATTGAAAGCTAGCGGTTGGCCTATTAGATAGATGGTACAAATATGAGTGCAGATTGAAATACACCCAAGTACTTTTTTATGGCTTATATTAGAGTTTGGTGTTCTTTTTTGTTTTTTGTTCAAAATTTGTTTGAAAATTACACACTTTTAATAGTATAGAAAGAATTGTTAGTCATATTATTCTCTCGATGGACATTAGAGTAATTTTCAAATATCACTTTAGAATTCTTGGAACATCTTTTTTGGAAGGTATATGTCTTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTTATGGAAACTCCACCTCCACACGTGTGACCTACAAAAGGAGAGAGAGGAGAGAGAAAGTTTAGTTGTTGGTGTGAAAATGTCTGTAAACCACAAGAGGAGAGAGAGAGAGAGAAGAAAAAAGTGAGTGAACTGCACTCAAAGAAATGTATCGGTAACATGCTTTGTGACAGCAAAAGTCAAGCTTTTCGGCCAACTTTTATTTTCTATTTTTTTCTTTAGAAAAAGAAACAAAACCCTAAAAAATAATTGTTTCACTTCATGCAGCTAAGAAATCACCCAAGATTAAGATTCTTGTCTCAAAACAATCTCAATTTTTCAACTACTAAAATTAAATATTCTCTTTCTTTTCTCTTCGTTTCTACTCATTATTGTCTGCCATTATATCCAAAAATTTCAGTTATACTATTATTTAATTCAATAAAATTTACATAAATAACTCATACACTCGAGATAGTTTAGAAGAGTTTTATCAAACCATAAGTATTAACTAAATTCTCACATTCTTCGCCTTTATGGTTTTGGTTTTAATGATTAAATTCAGCTCACATTGTTTTATATATTTCGTAACAGAAGAAGAAGACGGTAGGTGATATAAGAATGGAGATTTTAGAGTCATGTGTGCCACCAGGGTTTAGGTTTCATCCAACTGAGGAAGAACTTGTAGGTTATTATCTTAAAAGGAAGATCAACTCACAAAAGATTGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGGTAATTTATTATATATTCATTACATTCATTCACAATATTATTTCTTTCATAGTCAAGTTTTTAGTGGAAGGGTTAGCTAGCTTCAGACTCATAAATATATATATATTCATTTTCCAAACATAATCCATTTCCCCCTACTTGGACTTTCTCATTCACTCTATAAAAACTAGGCTTCACTTTTTCTCTTTCAACCATTTTTGAAAGCCTGAGTTCTTTTGCTTTGTTTTCATACTGCTTTTCCTTATGTGCAAAATCAATGGAATCCACTTTGTTTAGTAATAATCCACTCTTCATAAGTATTGTTTATTATCATTATCATTATTATTGAAACTTATGTTAGTTCATTTCTTCATATTTTTTTGTTTTTGTTATAAATAATAGGCTAAACTTGAAGTTTCTAAAAACTTATTCTTTTAGTTGATTTTCAAATTTTGATTTAATTTTTTAGAATGTTTTCTCAAAGTGTATAATACAGTAGGAAAACTATGGACAGAACACCCATGTTTAAAGCTTAATTTTCAGAAGAAAAAAAATCTAAAAAATCTTATAGTTATATTGATTTTATAATTACCTAATTAAGATTGTTTAAATTTGAAAAAAAAAATTAGAACAATTGAACCAATTCAAAAGTATTTTATAATTGCTAATCTAACTAACCCTAACATGTATATATCCTTTTAGTACTGTTCTTTTTACTAATACTCTTGAAAGATGACAGAGATTAATTAACTAACGGCCGCATGCTTTCTTTGAAGTGATTCTGAAAGTAGTTCTAAATTGTTAAAAGTAGTTTCTATTCTATCAAAAATCACATCAAACTCACTTTTAAATTTACAACGTATGATATGTGCAGCAAATTGTAAATTTGGTTACGATGAACAAAAGGAGTGGTACTTCTTTAGTCACAAAGACCGAAAATACCCGACGGGAAGTCGAACGAACCGAGCTACAAGTGCTGGGTTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGGATGAGAAAGACATTGGTGTTTTATAAAGGTCGAGCTCCAAACGGAAGAAAAACTGATTGGATTATGCATGAATATCGTCTCCAAACCTCTGAACTTGCACCTATTCAGGCAAGTTTCTCATATTAAACTTTTTTCTTGATTAATATATATATATATATGATGAAGAACCATATAGTATACGAAAATTATCCACTTCTTTTTAATTGTTACCGATACAAGAGGAGGTAGGGAGATTCAATTCGACTTAATTTCTAGTTCTTTTGATACATTTTTAAAATAAAATCATTTTTGTAACAACCAACTTCTTTTTTCAAAATTAAAAACATTAATAATTCAAAATGTATGTTGTTGATTACTATAACTTCTCAAGTGATTTTTTAAACCGTAAAATTTATTTTAAAAGATCTCAATAAATAAAAAGATATTTCAAAAAGGTCAAAAACAAAAAAGAAAACAAACACTTATTAAAAAATCGTTTTTTCCCTTAAAATTGTACTAAGAATAACTGTTTAGTTTGGAAAATGGAAACAATGATAAAGAAATCGAAAGAAAAGAAGCACAAGAATATTAAAAAACTAAAGAAAAAAATAGTTACAAAGAAAGCTCCAACGAATTTAATTTGTTCTTTGTATTTTTAACTAATTCATGTAAATTCACTAAGGTGGATGTAATTAAACTTTTAATGTTTTGAGACTCAGTAGTTCGATTTTTAAAAGTACATAATATAACTCGAGATTTTTATTTTGATATATGCAGGAAGAAGGTTGGGTGGTTTGTCGAGCATTTAAAAAGCCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTATGATCTCAAAAACAACAACAATAATAACAGTCAATTTGCTAGGTCGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTCACATGCTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAATCCTATGGCTCTGATCTCCACCACAAACAACAAAATTACCAATTCGTTCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACGACAATAATCCCAACGGTCCATGCCTCGAATGGAACGTTGATTTGGATGACTTTCTCTCCTCGTCCCAGATTGTTGAAATGTCCCCTTCTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATATATGAAAGAAAATATGCTGAAAGTTAGTTCAGAATATGATTTTAGAGTGTTTTTTTTTTTTGTAAGTATAAAGAGAGAGATCAGAGCTACAAAGTAATGGTCTTCTCTTCATTGAAACAGATATATATCTGATTGATTGATTAGGG ATGGAGATTTTAGAGTCATGTGTGCCACCAGGGTTTAGGTTTCATCCAACTGAGGAAGAACTTGTAGGTTATTATCTTAAAAGGAAGATCAACTCACAAAAGATTGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGCAAATTGTAAATTTGGTTACGATGAACAAAAGGAGTGGTACTTCTTTAGTCACAAAGACCGAAAATACCCGACGGGAAGTCGAACGAACCGAGCTACAAGTGCTGGGTTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGGATGAGAAAGACATTGGTGTTTTATAAAGGTCGAGCTCCAAACGGAAGAAAAACTGATTGGATTATGCATGAATATCGTCTCCAAACCTCTGAACTTGCACCTATTCAGGCAAAAGGTTGGGTGGTTTGTCGAGCATTTAAAAAGCCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTATGATCTCAAAAACAACAACAATAATAACAGTCAATTTGCTAGGTCGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTCACATGCTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAATCCTATGGCTCTGATCTCCACCACAAACAACAAAATTACCAATTCGTTCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACGACAATAATCCCAACGGTCCATGCCTCGAATGGAACGTTGATTTGGATGACTTTCTCTCCTCGTCCCAGATTGTTGAAATGTCCCCTTCTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATATATGA ATGGAGATTTTAGAGTCATGTGTGCCACCAGGGTTTAGGTTTCATCCAACTGAGGAAGAACTTGTAGGTTATTATCTTAAAAGGAAGATCAACTCACAAAAGATTGACTTAGATGTTATTATTGATATTGATCTTTACAAAATGGAGCCATGGGATATTCAAGCAAATTGTAAATTTGGTTACGATGAACAAAAGGAGTGGTACTTCTTTAGTCACAAAGACCGAAAATACCCGACGGGAAGTCGAACGAACCGAGCTACAAGTGCTGGGTTTTGGAAGGCCACAGGGAGGGATAAGGCAGTTTTGTCAAAGAATAGAGTGATTGGGATGAGAAAGACATTGGTGTTTTATAAAGGTCGAGCTCCAAACGGAAGAAAAACTGATTGGATTATGCATGAATATCGTCTCCAAACCTCTGAACTTGCACCTATTCAGGCAAAAGGTTGGGTGGTTTGTCGAGCATTTAAAAAGCCAAGCCCTAATCAAAACCAAGTCATTGGACCTTGGAATAGCTATCAACATCAAGCTTTATACTATGATCTCAAAAACAACAACAATAATAACAGTCAATTTGCTAGGTCGTCCCCTTCATTTTCAGATGCCATGACCCCTCACACTCACATGCTCAACTCTTCAGACCAACACCTCTCAAATTTTCACCAATCCTATGGCTCTGATCTCCACCACAAACAACAAAATTACCAATTCGTTCAGCTCCCGAATCTCGAGAGCCCGACACTCTCGACAAGCTTCGGAACCAACGAAACAAAGATAAATAATAACAACGACAATAATCCCAACGGTCCATGCCTCGAATGGAACGTTGATTTGGATGACTTTCTCTCCTCGTCCCAGATTGTTGAAATGTCCCCTTCTTCTTACCCTAATTTGCCTCAAACTTTTGTTGACTTTTGTAATGATATATGA MEILESCVPPGFRFHPTEEELVGYYLKRKINSQKIDLDVIIDIDLYKMEPWDIQANCKFGYDEQKEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKAVLSKNRVIGMRKTLVFYKGRAPNGRKTDWIMHEYRLQTSELAPIQAKGWVVCRAFKKPSPNQNQVIGPWNSYQHQALYYDLKNNNNNNSQFARSSPSFSDAMTPHTHMLNSSDQHLSNFHQSYGSDLHHKQQNYQFVQLPNLESPTLSTSFGTNETKINNNNDNNPNGPCLEWNVDLDDFLSSSQIVEMSPSSYPNLPQTFVDFCNDI
BLAST of CsaV3_7G023750 vs. NCBI nr
Match: XP_004149423.1 (PREDICTED: NAC domain-containing protein 7 [Cucumis sativus] >KGN44373.1 hypothetical protein Csa_7G273640 [Cucumis sativus]) HSP 1 Score: 629.8 bits (1623), Expect = 4.9e-177 Identity = 306/308 (99.35%), Postives = 307/308 (99.68%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. NCBI nr
Match: XP_022937049.1 (NAC domain-containing protein 30-like [Cucurbita moschata] >XP_022937050.1 NAC domain-containing protein 30-like [Cucurbita moschata]) HSP 1 Score: 454.9 bits (1169), Expect = 2.2e-124 Identity = 232/308 (75.32%), Postives = 245/308 (79.55%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. NCBI nr
Match: XP_022156579.1 (NAC domain-containing protein 30-like [Momordica charantia] >XP_022156580.1 NAC domain-containing protein 30-like [Momordica charantia]) HSP 1 Score: 443.4 bits (1139), Expect = 6.5e-121 Identity = 235/310 (75.81%), Postives = 255/310 (82.26%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. NCBI nr
Match: XP_022976956.1 (NAC domain-containing protein 30-like [Cucurbita maxima]) HSP 1 Score: 443.4 bits (1139), Expect = 6.5e-121 Identity = 225/308 (73.05%), Postives = 238/308 (77.27%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. NCBI nr
Match: XP_023554182.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443.0 bits (1138), Expect = 8.5e-121 Identity = 225/308 (73.05%), Postives = 237/308 (76.95%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TAIR10
Match: AT1G71930.1 (vascular related NAC-domain protein 7) HSP 1 Score: 304.7 bits (779), Expect = 6.6e-83 Identity = 163/292 (55.82%), Postives = 195/292 (66.78%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TAIR10
Match: AT2G18060.1 (vascular related NAC-domain protein 1) HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76 Identity = 151/280 (53.93%), Postives = 184/280 (65.71%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TAIR10
Match: AT4G36160.1 (NAC domain containing protein 76) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75 Identity = 145/257 (56.42%), Postives = 182/257 (70.82%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TAIR10
Match: AT5G66300.1 (NAC domain containing protein 105) HSP 1 Score: 271.9 bits (694), Expect = 4.7e-73 Identity = 146/284 (51.41%), Postives = 190/284 (66.90%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TAIR10
Match: AT1G62700.1 (Arabidopsis NAC domain containing protein 26) HSP 1 Score: 256.5 bits (654), Expect = 2.1e-68 Identity = 139/263 (52.85%), Postives = 175/263 (66.54%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. Swiss-Prot
Match: sp|Q9C8W9|NAC30_ARATH (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.2e-81 Identity = 163/292 (55.82%), Postives = 195/292 (66.78%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. Swiss-Prot
Match: sp|Q9SL41|NAC37_ARATH (NAC domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=NAC037 PE=1 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 2.2e-75 Identity = 151/280 (53.93%), Postives = 184/280 (65.71%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. Swiss-Prot
Match: sp|O65508|NAC76_ARATH (NAC domain-containing protein 76 OS=Arabidopsis thaliana OX=3702 GN=NAC076 PE=1 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 2.4e-74 Identity = 145/257 (56.42%), Postives = 182/257 (70.82%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. Swiss-Prot
Match: sp|Q9FH59|NC105_ARATH (NAC domain-containing protein 105 OS=Arabidopsis thaliana OX=3702 GN=NAC105 PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 8.5e-72 Identity = 146/284 (51.41%), Postives = 190/284 (66.90%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. Swiss-Prot
Match: sp|F4HYV5|NAC26_ARATH (NAC domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=NAC026 PE=1 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 3.7e-67 Identity = 139/263 (52.85%), Postives = 175/263 (66.54%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TrEMBL
Match: tr|A0A0A0K4F0|A0A0A0K4F0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G273640 PE=4 SV=1) HSP 1 Score: 629.8 bits (1623), Expect = 3.3e-177 Identity = 306/308 (99.35%), Postives = 307/308 (99.68%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TrEMBL
Match: tr|B9MW79|B9MW79_POPTR (Wood-associated NAC domain transcription factor 6A OS=Populus trichocarpa OX=3694 GN=WND6A PE=2 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 1.4e-92 Identity = 188/305 (61.64%), Postives = 218/305 (71.48%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TrEMBL
Match: tr|F1T112|F1T112_POPTR (Transcription factor OS=Populus trichocarpa OX=3694 GN=PtVNS07 PE=2 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 186/305 (60.98%), Postives = 217/305 (71.15%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TrEMBL
Match: tr|E5KUI2|E5KUI2_POPTR (Transcription factor OS=Populus trichocarpa OX=3694 GN=WND6B PE=2 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.0e-90 Identity = 187/315 (59.37%), Postives = 217/315 (68.89%), Query Frame = 0
BLAST of CsaV3_7G023750 vs. TrEMBL
Match: tr|V4T3V0|V4T3V0_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10003255mg PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 1.0e-90 Identity = 188/329 (57.14%), Postives = 219/329 (66.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |