CsaV3_7G023420 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAATCACCATCAGAAACCAAATCAATGAACGTCACAACGGCCTTGATCTTCGACTCTCACTCCGCCCACCTTCCGGACATCTCTCGTCCCAGCCATCCGCTGCCCCCATCGGTCATGCAAGGCCAAATGCAGTAACCAATATGAGAGTCACTCGCAGTTTGGGAACTCGTCGATCATCTCACCAACGCTGCAATTCTCGATCGCCAAGGACTACAGAGACAATCGAGCCACCATATCCATGGTCAACTAACCGACGAGCCATGGTTAGAACCCTAAACGACTTAAAATCAAATCAAATCCTCCAAATCACTGGGGACGTCCAGTGCCGACAGTGCCAAGTGGAATACACGATCGAATATGACATGGATTCGAAATTCGAGGAGATTGCAAGCTTTGTGGAGGAGAACAAGAACTCGTTTCGTGACCGAGCGCCTCAGTCATGGATGAACCCTAATTACCCTACTTGTCGATTTTGCGGACACGAGAATGGAGCGAGGCCAGTGATACCGAAGCAGTGGAGAAAGATCAACTGGTTGTTCTTGCTTTTGGGAGAAATGCTTGGAGTTTTGAATTTGAATCATCTGAAATATTTCTGCAGTAACACTTACAATCATCGAACAGGAGCAAAGAATCGCCTTCTTTATCTGACTTATATCACTTTGTGCCACCAAGTTGATCCTTCTGGCCGTTTCAATCGAGTTTAA ATGAAAATCACCATCAGAAACCAAATCAATGAACGTCACAACGGCCTTGATCTTCGACTCTCACTCCGCCCACCTTCCGGACATCTCTCGTCCCAGCCATCCGCTGCCCCCATCGGTCATGCAAGGCCAAATGCAGTAACCAATATGAGAGTCACTCGCAGTTTGGGAACTCGTCGATCATCTCACCAACGCTGCAATTCTCGATCGCCAAGGACTACAGAGACAATCGAGCCACCATATCCATGGTCAACTAACCGACGAGCCATGGTTAGAACCCTAAACGACTTAAAATCAAATCAAATCCTCCAAATCACTGGGGACGTCCAGTGCCGACAGTGCCAAGTGGAATACACGATCGAATATGACATGGATTCGAAATTCGAGGAGATTGCAAGCTTTGTGGAGGAGAACAAGAACTCGTTTCGTGACCGAGCGCCTCAGTCATGGATGAACCCTAATTACCCTACTTGTCGATTTTGCGGACACGAGAATGGAGCGAGGCCAGTGATACCGAAGCAGTGGAGAAAGATCAACTGGTTGTTCTTGCTTTTGGGAGAAATGCTTGGAGTTTTGAATTTGAATCATCTGAAATATTTCTGCAGTAACACTTACAATCATCGAACAGGAGCAAAGAATCGCCTTCTTTATCTGACTTATATCACTTTGTGCCACCAAGTTGATCCTTCTGGCCGTTTCAATCGAGTTTAA ATGAAAATCACCATCAGAAACCAAATCAATGAACGTCACAACGGCCTTGATCTTCGACTCTCACTCCGCCCACCTTCCGGACATCTCTCGTCCCAGCCATCCGCTGCCCCCATCGGTCATGCAAGGCCAAATGCAGTAACCAATATGAGAGTCACTCGCAGTTTGGGAACTCGTCGATCATCTCACCAACGCTGCAATTCTCGATCGCCAAGGACTACAGAGACAATCGAGCCACCATATCCATGGTCAACTAACCGACGAGCCATGGTTAGAACCCTAAACGACTTAAAATCAAATCAAATCCTCCAAATCACTGGGGACGTCCAGTGCCGACAGTGCCAAGTGGAATACACGATCGAATATGACATGGATTCGAAATTCGAGGAGATTGCAAGCTTTGTGGAGGAGAACAAGAACTCGTTTCGTGACCGAGCGCCTCAGTCATGGATGAACCCTAATTACCCTACTTGTCGATTTTGCGGACACGAGAATGGAGCGAGGCCAGTGATACCGAAGCAGTGGAGAAAGATCAACTGGTTGTTCTTGCTTTTGGGAGAAATGCTTGGAGTTTTGAATTTGAATCATCTGAAATATTTCTGCAGTAACACTTACAATCATCGAACAGGAGCAAAGAATCGCCTTCTTTATCTGACTTATATCACTTTGTGCCACCAAGTTGATCCTTCTGGCCGTTTCAATCGAGTTTAA MKITIRNQINERHNGLDLRLSLRPPSGHLSSQPSAAPIGHARPNAVTNMRVTRSLGTRRSSHQRCNSRSPRTTETIEPPYPWSTNRRAMVRTLNDLKSNQILQITGDVQCRQCQVEYTIEYDMDSKFEEIASFVEENKNSFRDRAPQSWMNPNYPTCRFCGHENGARPVIPKQWRKINWLFLLLGEMLGVLNLNHLKYFCSNTYNHRTGAKNRLLYLTYITLCHQVDPSGRFNRV
BLAST of CsaV3_7G023420 vs. NCBI nr
Match: XP_011659748.1 (PREDICTED: uncharacterized protein LOC105436256 [Cucumis sativus] >KGN44335.1 hypothetical protein Csa_7G259350 [Cucumis sativus]) HSP 1 Score: 490.7 bits (1262), Expect = 2.7e-135 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. NCBI nr
Match: XP_008447299.1 (PREDICTED: uncharacterized protein LOC103489770 [Cucumis melo]) HSP 1 Score: 410.2 bits (1053), Expect = 4.7e-111 Identity = 200/235 (85.11%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. NCBI nr
Match: XP_022952797.1 (uncharacterized protein LOC111455388 [Cucurbita moschata]) HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67 Identity = 125/190 (65.79%), Postives = 152/190 (80.00%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. NCBI nr
Match: XP_022972401.1 (uncharacterized protein LOC111470968 [Cucurbita maxima]) HSP 1 Score: 265.8 bits (678), Expect = 1.4e-67 Identity = 125/190 (65.79%), Postives = 151/190 (79.47%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. NCBI nr
Match: XP_023511615.1 (uncharacterized protein LOC111776409 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 258.5 bits (659), Expect = 2.3e-65 Identity = 127/220 (57.73%), Postives = 160/220 (72.73%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TAIR10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 169.9 bits (429), Expect = 1.9e-42 Identity = 91/222 (40.99%), Postives = 122/222 (54.95%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TAIR10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1)) HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40 Identity = 72/158 (45.57%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TrEMBL
Match: tr|A0A0A0K3Q8|A0A0A0K3Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1) HSP 1 Score: 490.7 bits (1262), Expect = 1.8e-135 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TrEMBL
Match: tr|A0A1S3BHR1|A0A1S3BHR1_CUCME (uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=4 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 3.1e-111 Identity = 200/235 (85.11%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TrEMBL
Match: tr|A0A1S4C9M7|A0A1S4C9M7_TOBAC (uncharacterized protein LOC107816455 OS=Nicotiana tabacum OX=4097 GN=LOC107816455 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51 Identity = 93/162 (57.41%), Postives = 123/162 (75.93%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TrEMBL
Match: tr|A0A1S3YXJ5|A0A1S3YXJ5_TOBAC (uncharacterized protein LOC107780834 OS=Nicotiana tabacum OX=4097 GN=LOC107780834 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51 Identity = 91/162 (56.17%), Postives = 124/162 (76.54%), Query Frame = 0
BLAST of CsaV3_7G023420 vs. TrEMBL
Match: tr|A0A1U7XJD4|A0A1U7XJD4_NICSY (uncharacterized protein LOC104235071 OS=Nicotiana sylvestris OX=4096 GN=LOC104235071 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51 Identity = 93/162 (57.41%), Postives = 123/162 (75.93%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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