CsaV3_7G022830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G022830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein LURP-one-related 7
Location	chr7 : 11728143 .. 11730926 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATTATGAAATCTAATATTTAACTCGCGTCAAATTCAACTATCTTTTACAACTTGTAAGGTTAAGAATGAAATTTGTAACCTTGACGCGATGTCGAGAAGTGTAGATGACATTAGAGATCTTCATAGGTTGGGTTAATGGGAAAATGAGATTGATCCTAGTTTGGTCATTGGTCATTTGTAGCCATAAGTTATAGAAAAACAGCAGAGAGATGTACCCATAGTTTGCTACTAACACGGGACTAAATTGAAAGCTCAATTGTTTATGGCTAATCCTTCGGATCCCGCCATTTGCTCTCCAGCTCTTCCGATTCCCATTGATCTTTTCCTCTCCAAACAACATCCCGACTACCTCACTAACTCCTCCGGCGATATCATCTACAGAATCAATCGTCATGCTTTGAAATCTTCGTCAGTTGACAAGATTCTGCTGCCTCACGCCGACGCCGCTGATCCTCTCATTTCTATTTTTCGCGTTAACGTGAGTATCTATGTTTCTTTCAACTTCTACTGCAATACATTGGTTTAGTATTCTGCTTCTAACTTCCTAATCATGTGAGGAACAAGTTTAAGTTTCTGGCCTCCAATTCTTGAAGCCTGAGTGTTATTCGATTGATTTTTCTTCCAATTGGAGAATTCCAGATTGTATGACCTAATAATTTTGGTGTTTCCTGTTCGTTTGAACTTTAGGTTATTCACTTTGTTTATAGACTTCTTCTTCCATAGCTTTTGTCCCTTATGTGCTTTCTAGTTGTTTGTGATTTTACGACTGTTATTGTTGGGTCTTGTCAAGTGTTGTATGACAGAAATGAAATCGACAAGCAAAAAGTGTGAACATTAAGGACACAAAGAGATTCGTGGTTTACTATTTTGTTTACTGCATTCTTGGATAGAGGAAGAGAGCAATTTTATTATTGGGAGGGAAAATGGATAATACATATATAGATGTGCCAATGGGACGGCATGATTGATTCGATACTCATCGAAACCTTGAGTGGATAGCGCGATCCGTTTCTGGTCTTTTTGAGCATTCAAGACATTTCAAAGTTGAAATTACCTTGCATTTGGTTAATAGCACTATGAATGACTCTCTCTAACCTTTTTAGGCTTCTAAAACCAAAAAAAAAAAGTGTGAATTTTACTCCTGAAATTGTTGCAAATAAGTTTTCTGATAGGATTTCTATGAAGCTGGGTAGCTTATAAACTATGAGATGCACTTCTGATTCTTGTGTTAGACTTCCTTTTTGTTGTTTCTCTGAAACAATGTGAAGAAATTTGTATTGGTCTCAGAAAGAATCTTGGGAAGGATTCAAAGGGGATGTTGGTGAGGAGAATTTGCTCTTCAAAGTTCAAAGAACACTCAACAAACTTAGAAGAACCGAGTTCAAAGTCTTCCTAGTCGGCGGAAATTTAGACGACTCAAATGCAAGCTTCGAGATGAAAGGCTGGCCGTTTCAGAGATCCTGTACTGTATATAACGGCAATACAATAGTGGCCCAGGTACAATATAACAATAACATATAGAAGAATGTCCTTGTGAAGCTTTCTGTTCCTTTCAACCCTTAAGCATGCTATTCCTAATCCTTATTTGTTGAGTGGAATATGAACATGACAATACTAACTGTGATGCTTGCTATAGTCTTCTTAATTTTAATGTAAGAAGCACGTACTCTTATTAGACATGTATCCAACACGTTTTAGTAAAATAAAACATGTTAGTACAATAAATATGTTAGACATGTATAGAAAACTTGTTGAGTAGACTAAAAAGACACGTACATGACAACAATTATAAAATTCAAATTTGAATACATTAAACAAAGTTTTTAAGCATATAAATGCATCGACTCATCTACTTTGAATTTTCTTTTCGTATGATTTACATTTGTATGTTTTAATAAACATGTAATTGCCATGTTGTATTGTAGATTTTTAAAATATGATATGTCGATTTTTAAAATACTATGTGCCTTCTTATTGTCGTATCTTTTATCTTTGCTCTTAGTTTGGATCAACCAAAAGAGTTACAATTGTGCAGACGACAAAAGCGCTGGGTTGAGCAATTCAACAAGGATACTAACTCTTAAAATAATCTGCAACTCAGGCACAATGAAAGCCTTATAATTATAGATGAGGAAATCTGTTTATAAACCATCAATATCCTTCCTCTGAGTCTATGTTAGTGTCTTTGCAATTTCAATTGTAAAACGAATTTCTGAAACATATTGAATGTTTGAAAAGACATCACATTATTTCTTGTGCATAAACTACATAGAACTCTCTGCATTTGTAAGTAAAGAATGAGTGATGATTGTTTCCTTTTTGATGCAGACGAGCCTAATGCACAAACTTCGTCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATATTTCCTAGTTCTGTTGATCCAGCATTGATTGTAGCTTTGATTGTAATATTCTTTGATGGACGAATGTAACAAATGTGAATGAGTATTACGAAGTTATTATTCCGCCTGTTGTTTGATGGATCTGATCGAGCAGGATAATGAATGGAAGAAGAAAGGGTAATTAGAATCACTATCTACAATTTTCATTTGATCTTTAGATAAAAAAATGGCTTACAATGTAAAATATTTTATCTTTATTAACAATTCTGTTGTGTGACTTTTACTTTATGCAAACTTGTAAGTTTGAGTATCATCTTCCAGATGGAGTTTCTAGTTTGACCAAGTACCATTGTTCTTAGATATCTTATTTTATCTAGAAAACTTAACAAATTTGTTGGTTTAAGTTTAAC

mRNA sequence

ATGGCTAATCCTTCGGATCCCGCCATTTGCTCTCCAGCTCTTCCGATTCCCATTGATCTTTTCCTCTCCAAACAACATCCCGACTACCTCACTAACTCCTCCGGCGATATCATCTACAGAATCAATCGTCATGCTTTGAAATCTTCGTCAGTTGACAAGATTCTGCTGCCTCACGCCGACGCCGCTGATCCTCTCATTTCTATTTTTCGCGTTAACAAAGAATCTTGGGAAGGATTCAAAGGGGATGTTGGTGAGGAGAATTTGCTCTTCAAAGTTCAAAGAACACTCAACAAACTTAGAAGAACCGAGTTCAAAGTCTTCCTAGTCGGCGGAAATTTAGACGACTCAAATGCAAGCTTCGAGATGAAAGGCTGGCCGTTTCAGAGATCCTGTACTGTATATAACGGCAATACAATAGTGGCCCAGACGAGCCTAATGCACAAACTTCGTCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATATTTCCTAGTTCTGTTGATCCAGCATTGATTGTAGCTTTGATTGTAATATTCTTTGATGGACGAATGTAA

Coding sequence (CDS)

ATGGCTAATCCTTCGGATCCCGCCATTTGCTCTCCAGCTCTTCCGATTCCCATTGATCTTTTCCTCTCCAAACAACATCCCGACTACCTCACTAACTCCTCCGGCGATATCATCTACAGAATCAATCGTCATGCTTTGAAATCTTCGTCAGTTGACAAGATTCTGCTGCCTCACGCCGACGCCGCTGATCCTCTCATTTCTATTTTTCGCGTTAACAAAGAATCTTGGGAAGGATTCAAAGGGGATGTTGGTGAGGAGAATTTGCTCTTCAAAGTTCAAAGAACACTCAACAAACTTAGAAGAACCGAGTTCAAAGTCTTCCTAGTCGGCGGAAATTTAGACGACTCAAATGCAAGCTTCGAGATGAAAGGCTGGCCGTTTCAGAGATCCTGTACTGTATATAACGGCAATACAATAGTGGCCCAGACGAGCCTAATGCACAAACTTCGTCAAATTTGGGTCAGAAGGGGAAGATTTCGACTAACCATATTTCCTAGTTCTGTTGATCCAGCATTGATTGTAGCTTTGATTGTAATATTCTTTGATGGACGAATGTAA

Protein sequence

MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHADAADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDGRM

Homology

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BLAST of CsaV3_7G022830 vs. NCBI nr
Match: XP_004139831.1 (PREDICTED: protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical protein Csa_7G238420 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 9.1e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60
           MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120
           AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF
Sbjct: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120

Query: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180
           EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF
Sbjct: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180

Query: 181 FDGRM 186
           FDGRM
Sbjct: 181 FDGRM 185

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BLAST of CsaV3_7G022830 vs. NCBI nr
Match: XP_008463053.1 (PREDICTED: protein LURP-one-related 7 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 3.1e-94
Identity = 172/185 (92.97%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60
           MAN SDP ICS ALPIPIDLFLSK+HP YLTNSSGDIIY+INRHA KSSSVDKILLPHAD
Sbjct: 1   MANSSDPTICSAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHAD 60

Query: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120
           AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNK RRTEF VFLVGGNLDD N SF
Sbjct: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDPNTSF 120

Query: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180
           EMKGWPFQRSCTVY+GNTIVAQTSLMHKL QIWVRRGRFRLTIFPSSVDPALIVALIVIF
Sbjct: 121 EMKGWPFQRSCTVYSGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180

Query: 181 FDGRM 186
           FDGRM
Sbjct: 181 FDGRM 185

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BLAST of CsaV3_7G022830 vs. NCBI nr
Match: XP_022154859.1 (protein LURP-one-related 7 [Momordica charantia])

HSP 1 Score: 301.6 bits (771), Expect = 1.8e-78
Identity = 150/187 (80.21%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 1   MANPSD-PAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKI-LLPH 60
           MAN S  PA CS ALPIP+DLFLS +HPDYLTNSSGDII+R++R + KS S+DKI LL  
Sbjct: 1   MANSSSAPATCSAALPIPVDLFLSNKHPDYLTNSSGDIIFRLSRQSSKSPSIDKILLLDA 60

Query: 61  ADAADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNA 120
           A AADPLISI R +KESW GFKGDVGEENLLFKV R++NKL RTEFKVFL G NLDDSNA
Sbjct: 61  AAAADPLISIHRHSKESWHGFKGDVGEENLLFKVHRSINKLTRTEFKVFLHGENLDDSNA 120

Query: 121 SFEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIV 180
           S EMKGWPFQRSCT+Y GNTIVAQTSLMHKL Q+WVRRGRFRLTIFP SVDPALIVAL+V
Sbjct: 121 SLEMKGWPFQRSCTIYKGNTIVAQTSLMHKLNQVWVRRGRFRLTIFPGSVDPALIVALVV 180

Query: 181 IFFDGRM 186
           IFFDGRM
Sbjct: 181 IFFDGRM 187

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BLAST of CsaV3_7G022830 vs. NCBI nr
Match: XP_022948358.1 (protein LURP-one-related 7 [Cucurbita moschata])

HSP 1 Score: 299.3 bits (765), Expect = 9.2e-78
Identity = 146/186 (78.49%), Postives = 168/186 (90.32%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILL-PHA 60
           MAN SDPAIC+ +LPIP+DLFLSK+HPD++T SSGD I+R++R +LKSSS+DKI+L   A
Sbjct: 1   MANSSDPAICAASLPIPVDLFLSKKHPDHVTTSSGDFIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 61  DAADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNAS 120
            AA PLISI RVNKESW+GFKGD+GE++LLFKV+RTLNKLRRTEFKVFLVG N DDSNAS
Sbjct: 61  AAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDSNAS 120

Query: 121 FEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVI 180
            EMKG+PFQRSCT+Y GNTIVAQTSLMHKL QI VRRGRFRLTIFP +VDP+LIVALIVI
Sbjct: 121 LEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVALIVI 180

Query: 181 FFDGRM 186
           FFDGR+
Sbjct: 181 FFDGRI 186

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BLAST of CsaV3_7G022830 vs. NCBI nr
Match: XP_023523464.1 (protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHA- 60
           MAN SDPAIC+  LPIP+DLFLSK+HPD++T SSG+II+R++R +LKSSS+DKI+L  A 
Sbjct: 1   MANSSDPAICAAPLPIPVDLFLSKKHPDHVTTSSGNIIFRLSRQSLKSSSIDKIVLHDAA 60

Query: 61  ---DAADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDS 120
               AA PLISI RVNKESW+GFKGD+GE++LLFKV+RTLNKLRRTEFKVFLVG N DDS
Sbjct: 61  AAXXAAGPLISIHRVNKESWQGFKGDIGEQDLLFKVERTLNKLRRTEFKVFLVGENSDDS 120

Query: 121 NASFEMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVAL 180
           NAS EMKG+PFQRSCT+Y GNTIVAQTSLMHKL QI VRRGRFRLTIFP +VDP+LIVAL
Sbjct: 121 NASLEMKGFPFQRSCTIYKGNTIVAQTSLMHKLHQICVRRGRFRLTIFPGTVDPSLIVAL 180

Query: 181 IVIFFDGRM 186
           IVIFFDGR+
Sbjct: 181 IVIFFDGRI 189

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BLAST of CsaV3_7G022830 vs. TAIR10
Match: AT2G30270.1 (Protein of unknown function (DUF567))

HSP 1 Score: 131.3 bits (329), Expect = 6.0e-31
Identity = 79/174 (45.40%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 16  IPIDLFLSKQHPDYLTNSSGDIIYRINRHAL-----KSSSVDKILLPHADAADPLISIFR 75
           IP+DLF SK+ P     SSGD+ +  +   L     KSSS  K LL  +    PL SI R
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV--PLFSISR 77

Query: 76  VNKESWEGFKGDVGE-ENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQR 135
           ++   WE  KGDV + ++L+  V+RT  +  +TE +V   G    +S+ +  +KG PFQ+
Sbjct: 78  LHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAG----ESSENLVIKGVPFQK 137

Query: 136 SCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDG 184
           SCT+Y+ ++IVAQTSLM+KLRQI+V R +FRLTIFP S+D +L+VA++ IF  G
Sbjct: 138 SCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

[Close]

BLAST of CsaV3_7G022830 vs. TAIR10
Match: AT5G01750.2 (Protein of unknown function (DUF567))

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13
Identity = 52/190 (27.37%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 6   DPAICSPALPIPIDLFLSKQHPD------YLTNSSGDIIYRINRHAL----KSSSVDKIL 65
           DP  C+   P PID+ + ++          +T+ +G++++++         K   +D   
Sbjct: 29  DPKYCA---PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSG 88

Query: 66  LPHADAADPLISIFRVNKESWEGFK-GDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLD 125
            P     + ++S+     + W+ F+ G   + +LL+ V+R+     +T+  VFL G N D
Sbjct: 89  TPVVTLREKMVSM----HDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNKD 148

Query: 126 DSNASFEMKGWPFQRSCTVYNG--NTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPAL 183
           +    F +KG   +RSC VY G  + IVAQ    H ++ +++ +  F +T++P +VD A 
Sbjct: 149 EKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDYAF 208

[Close]

BLAST of CsaV3_7G022830 vs. Swiss-Prot
Match: sp|Q8GWL2|LOR7_ARATH (Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 79/174 (45.40%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 16  IPIDLFLSKQHPDYLTNSSGDIIYRINRHAL-----KSSSVDKILLPHADAADPLISIFR 75
           IP+DLF SK+ P     SSGD+ +  +   L     KSSS  K LL  +    PL SI R
Sbjct: 18  IPVDLFASKKLPGL---SSGDLGFADSSEHLVFILRKSSSSLKSLLDSSGV--PLFSISR 77

Query: 76  VNKESWEGFKGDVGE-ENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMKGWPFQR 135
           ++   WE  KGDV + ++L+  V+RT  +  +TE +V   G    +S+ +  +KG PFQ+
Sbjct: 78  LHNGVWELHKGDVEKRKDLVLTVKRTSKRFSKTESEVSFAG----ESSENLVIKGVPFQK 137

Query: 136 SCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFDG 184
           SCT+Y+ ++IVAQTSLM+KLRQI+V R +FRLTIFP S+D +L+VA++ IF  G
Sbjct: 138 SCTIYSQDSIVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAIFLQG 182

[Close]

BLAST of CsaV3_7G022830 vs. Swiss-Prot
Match: sp|Q9LZX1|LOR15_ARATH (Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.6e-12
Identity = 52/190 (27.37%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 6   DPAICSPALPIPIDLFLSKQHPD------YLTNSSGDIIYRINRHAL----KSSSVDKIL 65
           DP  C+   P PID+ + ++          +T+ +G++++++         K   +D   
Sbjct: 29  DPKYCA---PYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSG 88

Query: 66  LPHADAADPLISIFRVNKESWEGFK-GDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLD 125
            P     + ++S+     + W+ F+ G   + +LL+ V+R+     +T+  VFL G N D
Sbjct: 89  TPVVTLREKMVSM----HDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-GHNKD 148

Query: 126 DSNASFEMKGWPFQRSCTVYNG--NTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPAL 183
           +    F +KG   +RSC VY G  + IVAQ    H ++ +++ +  F +T++P +VD A 
Sbjct: 149 EKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYP-NVDYAF 208

[Close]

BLAST of CsaV3_7G022830 vs. TrEMBL
Match: tr|A0A0A0K429|A0A0A0K429_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 6.0e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60
           MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD
Sbjct: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60

Query: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120
           AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF
Sbjct: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120

Query: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180
           EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF
Sbjct: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180

Query: 181 FDGRM 186
           FDGRM
Sbjct: 181 FDGRM 185

[Close]

BLAST of CsaV3_7G022830 vs. TrEMBL
Match: tr|A0A1S3CIB3|A0A1S3CIB3_CUCME (protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.1e-94
Identity = 172/185 (92.97%), Postives = 175/185 (94.59%), Query Frame = 0


Query: 1   MANPSDPAICSPALPIPIDLFLSKQHPDYLTNSSGDIIYRINRHALKSSSVDKILLPHAD 60
           MAN SDP ICS ALPIPIDLFLSK+HP YLTNSSGDIIY+INRHA KSSSVDKILLPHAD
Sbjct: 1   MANSSDPTICSAALPIPIDLFLSKEHPHYLTNSSGDIIYKINRHAFKSSSVDKILLPHAD 60

Query: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASF 120
           AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNK RRTEF VFLVGGNLDD N SF
Sbjct: 61  AADPLISIFRVNKESWEGFKGDVGEENLLFKVQRTLNKFRRTEFSVFLVGGNLDDPNTSF 120

Query: 121 EMKGWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180
           EMKGWPFQRSCTVY+GNTIVAQTSLMHKL QIWVRRGRFRLTIFPSSVDPALIVALIVIF
Sbjct: 121 EMKGWPFQRSCTVYSGNTIVAQTSLMHKLHQIWVRRGRFRLTIFPSSVDPALIVALIVIF 180

Query: 181 FDGRM 186
           FDGRM
Sbjct: 181 FDGRM 185

[Close]

BLAST of CsaV3_7G022830 vs. TrEMBL
Match: tr|V4V0G6|V4V0G6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002580mg PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 102/179 (56.98%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 15  PIPIDLFLSKQHPDY------LTNSSGDIIYRINR--HALKSSSVD--KILLPHADAADP 74
           PIP+DLF+SK++P          +SSGD+IYR+NR  H  KS+S    K ++    A +P
Sbjct: 13  PIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72

Query: 75  LISIFRVNKESWEGFKGDVGEE-NLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMK 134
           LIS++R +K  W+GFKGD GEE  L+FKV RT+  L RTEF+VFLV  N +DS + F MK
Sbjct: 73  LISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFLVDENSEDSASHFTMK 132

Query: 135 GWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFD 183
           G PFQ+SCT+Y GN+I+AQTSLM+KL+QI+VRR +FRLTIFP+S++PA+IVAL+VIF D
Sbjct: 133 GSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191

[Close]

BLAST of CsaV3_7G022830 vs. TrEMBL
Match: tr|A0A2H5Q2N5|A0A2H5Q2N5_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_190370 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 102/179 (56.98%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 15  PIPIDLFLSKQHPDY------LTNSSGDIIYRINR--HALKSSSVD--KILLPHADAADP 74
           PIP+DLF+SK++P          +SSGD+IYR+NR  H  KS+S    K ++    A +P
Sbjct: 13  PIPVDLFVSKKYPGLTHGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72

Query: 75  LISIFRVNKESWEGFKGDVGEE-NLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMK 134
           LIS++R +K  W+GFKGD GEE  L+FKV RT+  L RTEF+VFLV  N +DS + F MK
Sbjct: 73  LISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFLVDENSEDSASHFTMK 132

Query: 135 GWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFD 183
           G PFQ+SCT+Y GN+I+AQTSLM+KL+QI+VRR +FRLTIFP+S++PA+IVAL+VIF D
Sbjct: 133 GSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191

[Close]

BLAST of CsaV3_7G022830 vs. TrEMBL
Match: tr|A0A067E5Y7|A0A067E5Y7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029587mg PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.2e-47
Identity = 100/179 (55.87%), Postives = 135/179 (75.42%), Query Frame = 0


Query: 15  PIPIDLFLSKQHPDY------LTNSSGDIIYRINR--HALKSSSVD--KILLPHADAADP 74
           PIP+DLF+SK++P          +SSGD+IYR+NR  H  KS+S    K ++    A +P
Sbjct: 13  PIPVDLFVSKKYPGLTRGDIGFADSSGDVIYRVNRTQHQSKSNSSQRRKRVVVVDSAGNP 72

Query: 75  LISIFRVNKESWEGFKGDVGEE-NLLFKVQRTLNKLRRTEFKVFLVGGNLDDSNASFEMK 134
           LIS++R +K  W+GFKGD GEE  L+FKV RT+  L RTEF+VF+V  N +DS + F +K
Sbjct: 73  LISVYRQDKGLWQGFKGDDGEEKELIFKVNRTMKTLTRTEFEVFIVDENSEDSASHFTIK 132

Query: 135 GWPFQRSCTVYNGNTIVAQTSLMHKLRQIWVRRGRFRLTIFPSSVDPALIVALIVIFFD 183
           G PFQ+SCT+Y GN+I+AQTSLM+KL+QI+VRR +FRLTIFP+S++PA+IVAL+VIF D
Sbjct: 133 GSPFQKSCTIYRGNSIIAQTSLMYKLQQIYVRRNKFRLTIFPTSIEPAVIVALVVIFLD 191

The following BLAST results are available for this feature:

BLAST of CsaV3_7G022830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139831.1	9.1e-102	100.00	PREDICTED: protein LURP-one-related 7 [Cucumis sativus] >KGN44278.1 hypothetical...	[more]
XP_008463053.1	3.1e-94	92.97	PREDICTED: protein LURP-one-related 7 [Cucumis melo]	[more]
XP_022154859.1	1.8e-78	80.21	protein LURP-one-related 7 [Momordica charantia]	[more]
XP_022948358.1	9.2e-78	78.49	protein LURP-one-related 7 [Cucurbita moschata]	[more]
XP_023523464.1	3.5e-77	77.25	protein LURP-one-related 7 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G022830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30270.1	6.0e-31	45.40	Protein of unknown function (DUF567)	[more]
AT5G01750.2	2.5e-13	27.37	Protein of unknown function (DUF567)	[more]

BLAST of CsaV3_7G022830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWL2\|LOR7_ARATH	1.1e-29	45.40	Protein LURP-one-related 7 OS=Arabidopsis thaliana OX=3702 GN=At2g30270 PE=2 SV=...	[more]
sp\|Q9LZX1\|LOR15_ARATH	4.6e-12	27.37	Protein LURP-one-related 15 OS=Arabidopsis thaliana OX=3702 GN=At5g01750 PE=1 SV...	[more]

BLAST of CsaV3_7G022830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K429\|A0A0A0K429_CUCSA	6.0e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238420 PE=4 SV=1	[more]
tr\|A0A1S3CIB3\|A0A1S3CIB3_CUCME	2.1e-94	92.97	protein LURP-one-related 7 OS=Cucumis melo OX=3656 GN=LOC103501291 PE=4 SV=1	[more]
tr\|V4V0G6\|V4V0G6_9ROSI	1.5e-47	56.98	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002580mg PE=4 ...	[more]
tr\|A0A2H5Q2N5\|A0A2H5Q2N5_CITUN	1.5e-47	56.98	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_190370 PE=4 SV=1	[more]
tr\|A0A067E5Y7\|A0A067E5Y7_CITSI	7.2e-47	55.87	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029587mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025659	Tubby-like_C
IPR007612	LOR
IPR038595	LOR_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G022830.1	CsaV3_7G022830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038595	LURP-one-related superfamily	GENE3D	G3DSA:3.20.90.20		coord: 8..184 e-value: 3.3E-29 score: 103.7
IPR007612	LURP-one-related	PFAM	PF04525	LOR	coord: 30..179 e-value: 8.9E-18 score: 64.5
IPR007612	LURP-one-related	PANTHER	PTHR31087	FAMILY NOT NAMED	coord: 1..183
None	No IPR available	PANTHER	PTHR31087:SF16	PROTEIN LURP-ONE-RELATED 7	coord: 1..183
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	SSF54518	Tubby C-terminal domain-like	coord: 30..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G022830	CSPI07G10840	Wild cucumber (PI 183967)	cpicucB414
CsaV3_7G022830	Cucsa.239730	Cucumber (Gy14) v1	cgycucB361
CsaV3_7G022830	CsGy7G010200	Cucumber (Gy14) v2	cgybcucB347

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G022830	Cucumber (Chinese Long) v3	cuccucB215
CsaV3_7G022830	Silver-seed gourd	carcucB0380
CsaV3_7G022830	Silver-seed gourd	carcucB0426
CsaV3_7G022830	Silver-seed gourd	carcucB0572
CsaV3_7G022830	Cucumber (Gy14) v2	cgybcucB307
CsaV3_7G022830	Cucumber (Gy14) v1	cgycucB161
CsaV3_7G022830	Cucurbita maxima (Rimu)	cmacucB0174
CsaV3_7G022830	Cucurbita maxima (Rimu)	cmacucB0640
CsaV3_7G022830	Cucurbita maxima (Rimu)	cmacucB0685
CsaV3_7G022830	Cucurbita moschata (Rifu)	cmocucB0156
CsaV3_7G022830	Cucurbita moschata (Rifu)	cmocucB0624
CsaV3_7G022830	Cucurbita moschata (Rifu)	cmocucB0670
CsaV3_7G022830	Cucurbita pepo (Zucchini)	cpecucB0324
CsaV3_7G022830	Cucurbita pepo (Zucchini)	cpecucB0372
CsaV3_7G022830	Cucurbita pepo (Zucchini)	cpecucB0864
CsaV3_7G022830	Wild cucumber (PI 183967)	cpicucB376
CsaV3_7G022830	Bottle gourd (USVL1VR-Ls)	cuclsiB527
CsaV3_7G022830	Bottle gourd (USVL1VR-Ls)	cuclsiB533
CsaV3_7G022830	Melon (DHL92) v3.5.1	cucmeB535
CsaV3_7G022830	Melon (DHL92) v3.5.1	cucmeB551
CsaV3_7G022830	Melon (DHL92) v3.6.1	cucmedB516
CsaV3_7G022830	Melon (DHL92) v3.6.1	cucmedB539
CsaV3_7G022830	Watermelon (Charleston Gray)	cucwcgB536
CsaV3_7G022830	Watermelon (Charleston Gray)	cucwcgB566
CsaV3_7G022830	Watermelon (97103) v1	cucwmB578
CsaV3_7G022830	Watermelon (97103) v1	cucwmB630
CsaV3_7G022830	Watermelon (97103) v2	cucwmbB544
CsaV3_7G022830	Watermelon (97103) v2	cucwmbB582
CsaV3_7G022830	Wax gourd	cucwgoB696
CsaV3_7G022830	Wax gourd	cucwgoB708