CsaV3_7G022550 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G022550
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 11429778 .. 11430356 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAACCAAACCCCCCTTAAGCTCTCATGGTTGGCAAAGAAGCAGCTTCCCAGAAAATGCTTTTAAATTAAGCAAGCTCTCATTGTTGGACGAGTCTGGAGACTCCACCAAAACAGTCTATACAACAAGGTGGCCATACTATTCTTAATTATGTCCATATATTTCTGTTAAAGACCCCACCAGAAATCCTTGAGAACTTGAAAAGGCCACAGAGTTATTTTAATTTTCTGTCTCTCTCAGTTGTGGTTGTTGGAAAGGCACAGAGCATAAGATACCAGATAGTTCGAGACAAATCGGCGCTGGAACTATGTGAGATCAATCCTTAAAACTACAAGAAGATTTTGCTCCAAGAGATTAGCTGACCTTGATCAAGAATGGAGATACCCCGAATCAGGTTTCGGCCATACTGTGAAGGTCTGAGCTTCCAAGCCAGCCAGTATAATGAGTTCGTCTTTCAAAGCAGCAATTTCAGAAGAGAAAGGGTGAAGAATTGAACAATGCTACTTCCATCAAGGGAACCACTGTGAACTCCAGGGCAGAAAAAATCGTGTTAACAATCACCGAAGTTGGATTATGA

mRNA sequence

ATGTTAACCAAACCCCCCTTAAGCTCTCATGGTTGGCAAAGAAGCAGCTTCCCAGAAAATGCTTTTAAATTAAGCAAGCTCTCATTGTTGGACGAGTCTGGAGACTCCACCAAAACAGTCTATACAACAAGTTGTGGTTGTTGGAAAGGCACAGAGCATAAGATACCAGATAGTTCGAGACAAATCGGCGCTGGAACTATAAGATTTTGCTCCAAGAGATTAGCTGACCTTGATCAAGAATGGAGATACCCCGAATCAGGTTTCGGCCATACTGTGAAGCAATTTCAGAAGAGAAAGGGTGAAGAATTGAACAATGCTACTTCCATCAAGGGAACCACTGTGAACTCCAGGGCAGAAAAAATCGTGTTAACAATCACCGAAGTTGGATTATGA

Coding sequence (CDS)

ATGTTAACCAAACCCCCCTTAAGCTCTCATGGTTGGCAAAGAAGCAGCTTCCCAGAAAATGCTTTTAAATTAAGCAAGCTCTCATTGTTGGACGAGTCTGGAGACTCCACCAAAACAGTCTATACAACAAGTTGTGGTTGTTGGAAAGGCACAGAGCATAAGATACCAGATAGTTCGAGACAAATCGGCGCTGGAACTATAAGATTTTGCTCCAAGAGATTAGCTGACCTTGATCAAGAATGGAGATACCCCGAATCAGGTTTCGGCCATACTGTGAAGCAATTTCAGAAGAGAAAGGGTGAAGAATTGAACAATGCTACTTCCATCAAGGGAACCACTGTGAACTCCAGGGCAGAAAAAATCGTGTTAACAATCACCGAAGTTGGATTATGA

Protein sequence

MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSRQIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEKIVLTITEVGL
Homology
[Close]
BLAST of CsaV3_7G022550 vs. NCBI nr
Match: KGN44250.1 (hypothetical protein Csa_7G234720 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 9.3e-69
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR 60
           MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR
Sbjct: 1   MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR 60

Query: 61  QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK 120
           QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK
Sbjct: 61  QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK 120

Query: 121 IVLTITEVGL 131
           IVLTITEVGL
Sbjct: 121 IVLTITEVGL 130

[Close]
BLAST of CsaV3_7G022550 vs. TrEMBL
Match: tr|A0A0A0K3G9|A0A0A0K3G9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234720 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.2e-69
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR 60
           MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR
Sbjct: 1   MLTKPPLSSHGWQRSSFPENAFKLSKLSLLDESGDSTKTVYTTSCGCWKGTEHKIPDSSR 60

Query: 61  QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK 120
           QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK
Sbjct: 61  QIGAGTIRFCSKRLADLDQEWRYPESGFGHTVKQFQKRKGEELNNATSIKGTTVNSRAEK 120

Query: 121 IVLTITEVGL 131
           IVLTITEVGL
Sbjct: 121 IVLTITEVGL 130

The following BLAST results are available for this feature:
BLAST of CsaV3_7G022550 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44250.19.3e-69100.00hypothetical protein Csa_7G234720 [Cucumis sativus][more]
BLAST of CsaV3_7G022550 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G022550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G022550 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K3G9|A0A0A0K3G9_CUCSA6.2e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234720 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G022550.1CsaV3_7G022550.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G022550Cucumber (Chinese Long) v3cuccucB220
CsaV3_7G022550Silver-seed gourdcarcucB0090
CsaV3_7G022550Silver-seed gourdcarcucB0359
CsaV3_7G022550Cucumber (Gy14) v2cgybcucB347
CsaV3_7G022550Cucumber (Gy14) v1cgycucB361
CsaV3_7G022550Cucurbita maxima (Rimu)cmacucB0459
CsaV3_7G022550Cucurbita maxima (Rimu)cmacucB1087
CsaV3_7G022550Cucurbita moschata (Rifu)cmocucB0452
CsaV3_7G022550Cucurbita moschata (Rifu)cmocucB1069
CsaV3_7G022550Cucurbita pepo (Zucchini)cpecucB0184
CsaV3_7G022550Cucurbita pepo (Zucchini)cpecucB0426
CsaV3_7G022550Wild cucumber (PI 183967)cpicucB414
CsaV3_7G022550Bottle gourd (USVL1VR-Ls)cuclsiB519
CsaV3_7G022550Melon (DHL92) v3.5.1cucmeB551
CsaV3_7G022550Melon (DHL92) v3.6.1cucmedB539
CsaV3_7G022550Watermelon (Charleston Gray)cucwcgB590
CsaV3_7G022550Watermelon (97103) v1cucwmB644
CsaV3_7G022550Watermelon (97103) v2cucwmbB568
CsaV3_7G022550Wax gourdcucwgoB675