CsaV3_7G022300 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G022300
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 11206815 .. 11208006 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCTTTGGGAATCAGAAAAGGTACATGGTCAGTTATCACATCTCATTCAATAAAGAAAGAGGCATCATGATTACTTTTGAATGCACGATGAACTTATAAATATACCTAAATTTTCCTCTTCTCAACCCATTTGCATCCATTATTCTCATGTGTCCTTGGGTTTTTCTTCTAAGTTCTATCTTTTCCTCCAGCAAACTCTCAATCATCCTTGAAGTTCCAAAACAAAAACATCCATGACCGAGCAACAATGGAACACCCTCGCCTTCACCAAAACCCTCATTCTTAATTGAAAGAAGCATTTGGCTTCATCCTCAAACTCACTACCTACAATGAAAGAAGAGAAATGGATGAAGAAGAGAAATGGATGAAGAAGACAACGGAAAGGTCGTCGGATGATAGAGAGTTGGTGCACCTCTTGCGTGCATTCGAAGAAAGGGTCTCTAACAGCAAGATATAGCTTGAGGTGACCCGGGAGAAATTAATGAGACTGACGAAGGAAAAAGAAAGAAAACGTGAGAGGAAGAAAGCGAGCAAGTTGAGACACTGTCCTCTAAACAGATGGCAATAAGGGGAGAAGACGTCTAGCATGCTGAAGCACTCAAAGCTGAGTTACAGGCGATGAGCCTTGAGGAAAGTAAACGAGCATCGCCAAAGAAGACCATAAAGAAGGATGTCATCAAGCCTATAAAGGTCAAAAGCAAGGTTGGTACTTCTAGATCTGAGGGAGGACAACCAGGCGGCGAGGGGAGCGAGGTCCCACACGAGCTAGCATCTCCAGAGAAGTAAAGGTCAAGAAGGGTTGAAAGATTTGATCGTAGGGGTAGGGTTGTGAGATATGCAACAACTAATATGCAAGATGGAAAGAATTGAATTGACAAGTAATATGTGTATAAAAGTTACATGAGTAAATCGATTACAAGAAATGAGAAGAGGTTGGCCTATCGATACTATTCTTCCAACTACTTTGTAACCCAACCTTACAACAGTAGAGACATGTCGAGGTGAACCCATAGGAACTAGTGGCTAGAATTATTAGAATCTAAATCTCAAGAAAAGAATTTATTAGTAACTTTAAGAACAAAAAAAAACAATTATAGGAATACAATCTTGAGTTTTGTAACATTTAAGAAACTAAATGGGGTCTGATTATGAAAGAAATAGTCCTTCAAAAATTCAATTCAACAAAGTGAG

mRNA sequence

ATGAGCCTTGAGGAAAGTAAACGAGCATCGCCAAAGAAGACCATAAAGAAGGATGTCATCAAGCCTATAAAGGTCAAAAGCAAGGTTGGTACTTCTAGATCTGAGGGAGGACAACCAGGCGGCGAGGGGAGCGAGGTCCCACACGAGCTAGCATCTCCAGAGAAGTAA

Coding sequence (CDS)

ATGAGCCTTGAGGAAAGTAAACGAGCATCGCCAAAGAAGACCATAAAGAAGGATGTCATCAAGCCTATAAAGGTCAAAAGCAAGGTTGGTACTTCTAGATCTGAGGGAGGACAACCAGGCGGCGAGGGGAGCGAGGTCCCACACGAGCTAGCATCTCCAGAGAAGTAA

Protein sequence

MSLEESKRASPKKTIKKDVIKPIKVKSKVGTSRSEGGQPGGEGSEVPHELASPEK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G022300.1CsaV3_7G022300.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G022300CSPI07G10340Wild cucumber (PI 183967)cpicucB414
CsaV3_7G022300MELO3C012677Melon (DHL92) v3.5.1cucmeB551
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G022300Cucumber (Gy14) v2cgybcucB347
CsaV3_7G022300Cucumber (Gy14) v1cgycucB361
CsaV3_7G022300Melon (DHL92) v3.6.1cucmedB539
CsaV3_7G022300Cucumber (Chinese Long) v3cuccucB220