CsaV3_7G021870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G021870
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionEnvelope-like protein
Locationchr7 : 10592971 .. 10593279 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCATTCATGTGTATAAGTGTCAGATTGTGATCTCCCCAACAGTGATCAATGCATTTCTTGGTCTTGTCACTCCTCCGAATCCATCTATGTCTTCTCCGTCAACTGATGAATTAGCTTGCGTTCTGGCTAGTGGCACATTTACAGTTTGGCCTATGAATGACATTCCTGTTGCGTCGTTCAGTGTCAAGTACGCATTCTACACAAGATTGGGATTGATAACTAGTTTCCCTCATTCCATGGCCCTAGTGTATTTGTCGCACTTGCTGCCTTCTTGTATAGGATTGGTACTCGTTCCTCTGTGGATGCTG

mRNA sequence

ACCATTCATGTGTATAAGTGTCAGATTGTGATCTCCCCAACAGTGATCAATGCATTTCTTGGTCTTGTCACTCCTCCGAATCCATCTATGTCTTCTCCGTCAACTGATGAATTAGCTTGCGTTCTGGCTAGTGGCACATTTACAGTTTGGCCTATGAATGACATTCCTGTTGCGTCGTTCAGTGTCAAGTACGCATTCTACACAAGATTGGGATTGATAACTAGTTTCCCTCATTCCATGGCCCTAGTGTATTTGTCGCACTTGCTGCCTTCTTGTATAGGATTGGTACTCGTTCCTCTGTGGATGCTG

Coding sequence (CDS)

ACCATTCATGTGTATAAGTGTCAGATTGTGATCTCCCCAACAGTGATCAATGCATTTCTTGGTCTTGTCACTCCTCCGAATCCATCTATGTCTTCTCCGTCAACTGATGAATTAGCTTGCGTTCTGGCTAGTGGCACATTTACAGTTTGGCCTATGAATGACATTCCTGTTGCGTCGTTCAGTGTCAAGTACGCATTCTACACAAGATTGGGATTGATAACTAGTTTCCCTCATTCCATGGCCCTAGTGTATTTGTCGCACTTGCTGCCTTCTTGTATAGGATTGGTACTCGTTCCTCTGTGGATGCTG

Protein sequence

TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASFSVKYAFYTRLGLITSFPHSMALVYLSHLLPSCIGLVLVPLWML
Homology
[Close]
BLAST of CsaV3_7G021870 vs. NCBI nr
Match: XP_008466805.1 (PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo])

HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   +  ISPTVIN F+G     + S SSPSTD LA VL+ GT + WP+NDIPV + 
Sbjct: 270 TVHIRGFKFTISPTVINGFMGNAVTLDFSPSSPSTDVLAYVLSGGTLSSWPVNDIPVVAL 329

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           S KYA   ++G+   FP S A
Sbjct: 330 SFKYAILHKIGIANWFPSSHA 350

[Close]
BLAST of CsaV3_7G021870 vs. NCBI nr
Match: XP_008441663.1 (PREDICTED: uncharacterized protein LOC103485747 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 4.1e-11
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   +  ISPTVIN FLG V   N S SSPSTD LA VL+  T + WP+N IP  + 
Sbjct: 44  TVHIRDFKFTISPTVINGFLGNVVSINFSPSSPSTDVLASVLSGETLSSWPVNGIPAVAL 103

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           SVKYA   ++G+   FP S A
Sbjct: 104 SVKYAILHKIGIANWFPSSHA 124

[Close]
BLAST of CsaV3_7G021870 vs. NCBI nr
Match: XP_008457126.1 (PREDICTED: uncharacterized protein LOC103496872 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 9.1e-11
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   + VIS TVIN FLG V     S SSPST+ LA VL+ GT + WP+N IP  + 
Sbjct: 45  TVHIRGFKFVISSTVINGFLGNVIDVYCSPSSPSTNVLASVLSGGTLSTWPVNGIPAVAL 104

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           S+KYA + ++G+   FP S A
Sbjct: 105 SIKYAIFHKIGIANWFPSSRA 125

[Close]
BLAST of CsaV3_7G021870 vs. NCBI nr
Match: XP_011659856.1 (PREDICTED: cell wall protein RBR3-like [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           TIHV    +VISP VIN FLGL    N  + + STD LA VL  G+  VWP+  IP A+ 
Sbjct: 282 TIHVRGRTLVISPYVINTFLGLTPSENADLPTHSTDTLASVLTGGSLIVWPLTGIPSAAL 341

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           SVKYA   ++G++  FP S A
Sbjct: 342 SVKYAILHKIGIVNWFPSSHA 362

[Close]
BLAST of CsaV3_7G021870 vs. NCBI nr
Match: XP_008462856.1 (PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-10
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   + VISP VIN FLG     + S S P+T+ LA VL+ GT + WP+N IPVA+ 
Sbjct: 45  TVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAAL 104

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           SVKYA   ++G+   FP S A
Sbjct: 105 SVKYAILHKIGIANWFPSSHA 125

[Close]
BLAST of CsaV3_7G021870 vs. TrEMBL
Match: tr|A0A1S3CS40|A0A1S3CS40_CUCME (uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-11
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   +  ISPTVIN F+G     + S SSPSTD LA VL+ GT + WP+NDIPV + 
Sbjct: 270 TVHIRGFKFTISPTVINGFMGNAVTLDFSPSSPSTDVLAYVLSGGTLSSWPVNDIPVVAL 329

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           S KYA   ++G+   FP S A
Sbjct: 330 SFKYAILHKIGIANWFPSSHA 350

[Close]
BLAST of CsaV3_7G021870 vs. TrEMBL
Match: tr|A0A1S3B3X9|A0A1S3B3X9_CUCME (uncharacterized protein LOC103485747 OS=Cucumis melo OX=3656 GN=LOC103485747 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-11
Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   +  ISPTVIN FLG V   N S SSPSTD LA VL+  T + WP+N IP  + 
Sbjct: 44  TVHIRDFKFTISPTVINGFLGNVVSINFSPSSPSTDVLASVLSGETLSSWPVNGIPAVAL 103

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           SVKYA   ++G+   FP S A
Sbjct: 104 SVKYAILHKIGIANWFPSSHA 124

[Close]
BLAST of CsaV3_7G021870 vs. TrEMBL
Match: tr|A0A1S3C633|A0A1S3C633_CUCME (uncharacterized protein LOC103496872 OS=Cucumis melo OX=3656 GN=LOC103496872 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.0e-11
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   + VIS TVIN FLG V     S SSPST+ LA VL+ GT + WP+N IP  + 
Sbjct: 45  TVHIRGFKFVISSTVINGFLGNVIDVYCSPSSPSTNVLASVLSGGTLSTWPVNGIPAVAL 104

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           S+KYA + ++G+   FP S A
Sbjct: 105 SIKYAIFHKIGIANWFPSSRA 125

[Close]
BLAST of CsaV3_7G021870 vs. TrEMBL
Match: tr|A0A1S4DYJ3|A0A1S4DYJ3_CUCME (uncharacterized protein LOC103492891 OS=Cucumis melo OX=3656 GN=LOC103492891 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   + VISP VIN FLG V   + S SSPSTD LA VL+ GT + W +N IP  S 
Sbjct: 283 TVHIRGFKFVISPAVINGFLGNVVDIDCSSSSPSTDVLASVLSGGTLSAWHVNGIPAVSL 342

Query: 61  SVKYAFYTRLGLITSFPHS 80
           ++KYA   ++G+   FP S
Sbjct: 343 NIKYAILHKIGIANWFPSS 361

[Close]
BLAST of CsaV3_7G021870 vs. TrEMBL
Match: tr|A0A1S3CHW3|A0A1S3CHW3_CUCME (uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 

Query: 1   TIHVYKCQIVISPTVINAFLGLVTPPNPSMSSPSTDELACVLASGTFTVWPMNDIPVASF 60
           T+H+   + VISP VIN FLG     + S S P+T+ LA VL+ GT + WP+N IPVA+ 
Sbjct: 45  TVHIRGFKFVISPAVINEFLGNTVDIDYSSSCPTTEVLANVLSGGTLSTWPVNGIPVAAL 104

Query: 61  SVKYAFYTRLGLITSFPHSMA 82
           SVKYA   ++G+   FP S A
Sbjct: 105 SVKYAILHKIGIANWFPSSHA 125

The following BLAST results are available for this feature:
BLAST of CsaV3_7G021870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008466805.13.1e-1149.38PREDICTED: uncharacterized protein LOC103504128 [Cucumis melo][more]
XP_008441663.14.1e-1150.62PREDICTED: uncharacterized protein LOC103485747 [Cucumis melo][more]
XP_008457126.19.1e-1148.15PREDICTED: uncharacterized protein LOC103496872 [Cucumis melo][more]
XP_011659856.11.2e-1049.38PREDICTED: cell wall protein RBR3-like [Cucumis sativus][more]
XP_008462856.12.0e-1048.15PREDICTED: uncharacterized protein LOC103501137 [Cucumis melo][more]
BLAST of CsaV3_7G021870 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021870 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CS40|A0A1S3CS40_CUCME2.1e-1149.38uncharacterized protein LOC103504128 OS=Cucumis melo OX=3656 GN=LOC103504128 PE=... [more]
tr|A0A1S3B3X9|A0A1S3B3X9_CUCME2.7e-1150.62uncharacterized protein LOC103485747 OS=Cucumis melo OX=3656 GN=LOC103485747 PE=... [more]
tr|A0A1S3C633|A0A1S3C633_CUCME6.0e-1148.15uncharacterized protein LOC103496872 OS=Cucumis melo OX=3656 GN=LOC103496872 PE=... [more]
tr|A0A1S4DYJ3|A0A1S4DYJ3_CUCME1.3e-1048.10uncharacterized protein LOC103492891 OS=Cucumis melo OX=3656 GN=LOC103492891 PE=... [more]
tr|A0A1S3CHW3|A0A1S3CHW3_CUCME1.3e-1048.15uncharacterized protein LOC103501137 OS=Cucumis melo OX=3656 GN=LOC103501137 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G021870.1CsaV3_7G021870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G021870Cucsa.007280Cucumber (Gy14) v1cgycucB132
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G021870Cucumber (Gy14) v2cgybcucB347
CsaV3_7G021870Cucurbita maxima (Rimu)cmacucB0049
CsaV3_7G021870Cucurbita maxima (Rimu)cmacucB0597
CsaV3_7G021870Cucurbita moschata (Rifu)cmocucB0035
CsaV3_7G021870Cucurbita moschata (Rifu)cmocucB0584
CsaV3_7G021870Cucurbita pepo (Zucchini)cpecucB0727
CsaV3_7G021870Cucurbita pepo (Zucchini)cpecucB0988
CsaV3_7G021870Wild cucumber (PI 183967)cpicucB414
CsaV3_7G021870Bottle gourd (USVL1VR-Ls)cuclsiB544
CsaV3_7G021870Melon (DHL92) v3.5.1cucmeB552
CsaV3_7G021870Melon (DHL92) v3.6.1cucmedB540
CsaV3_7G021870Watermelon (Charleston Gray)cucwcgB539
CsaV3_7G021870Watermelon (97103) v1cucwmB581
CsaV3_7G021870Watermelon (97103) v2cucwmbB585
CsaV3_7G021870Wax gourdcucwgoB717
CsaV3_7G021870Silver-seed gourdcarcucB0944