CsaV3_7G021560 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G021560
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 10226947 .. 10227169 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGAAAGCTCTTCTTCTTCATGGGTTGAGGGCCTTTGGATTGATGGGACGGAAAGAGCAAAGTTCAGCAAGATCCATCATCAATAAAGAACACGAGGTCTACAATCTTTAACAGATGTCGCTCCCCTCTCGCCTTCACCTAGCCTATGTTGAATCGCTCCTTTTTAGACTCCTCTTTGCTCTTGGTTTGCGAGATAGCAAGATTGAATGCTAGGTAG

mRNA sequence

ATGGAAAAGAAAGCTCTTCTTCTTCATGGGTTGAGGGCCTTTGGATTGATGGGACGGAAAGAGCAAAGTTCAGCAAGATCCATCATCAATAAAGAACACGAGCCTATGTTGAATCGCTCCTTTTTAGACTCCTCTTTGCTCTTGGTTTGCGAGATAGCAAGATTGAATGCTAGGTAG

Coding sequence (CDS)

ATGGAAAAGAAAGCTCTTCTTCTTCATGGGTTGAGGGCCTTTGGATTGATGGGACGGAAAGAGCAAAGTTCAGCAAGATCCATCATCAATAAAGAACACGAGCCTATGTTGAATCGCTCCTTTTTAGACTCCTCTTTGCTCTTGGTTTGCGAGATAGCAAGATTGAATGCTAGGTAG

Protein sequence

MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR
Homology
[Close]
BLAST of CsaV3_7G021560 vs. NCBI nr
Match: KGN44127.1 (hypothetical protein Csa_7G199560 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 1  MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR 59
          MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR
Sbjct: 1  MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR 58

[Close]
BLAST of CsaV3_7G021560 vs. TrEMBL
Match: tr|A0A0A0K743|A0A0A0K743_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G199560 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 1  MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR 59
          MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR
Sbjct: 1  MEKKALLLHGLRAFGLMGRKEQSSARSIINKEHEPMLNRSFLDSSLLLVCEIARLNAR 58

The following BLAST results are available for this feature:
BLAST of CsaV3_7G021560 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44127.11.7e-22100.00hypothetical protein Csa_7G199560 [Cucumis sativus][more]
BLAST of CsaV3_7G021560 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021560 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K743|A0A0A0K743_CUCSA1.1e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G199560 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G021560.1CsaV3_7G021560.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G021560CSPI07G09430Wild cucumber (PI 183967)cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G021560Wax gourdcucwgoB736
CsaV3_7G021560Silver-seed gourdcarcucB0091
CsaV3_7G021560Silver-seed gourdcarcucB0464
CsaV3_7G021560Cucumber (Gy14) v2cgybcucB347
CsaV3_7G021560Cucurbita maxima (Rimu)cmacucB0054
CsaV3_7G021560Cucurbita maxima (Rimu)cmacucB0588
CsaV3_7G021560Cucurbita moschata (Rifu)cmocucB0040
CsaV3_7G021560Cucurbita moschata (Rifu)cmocucB0577
CsaV3_7G021560Cucurbita pepo (Zucchini)cpecucB0735
CsaV3_7G021560Cucurbita pepo (Zucchini)cpecucB0992
CsaV3_7G021560Bottle gourd (USVL1VR-Ls)cuclsiB540
CsaV3_7G021560Melon (DHL92) v3.5.1cucmeB552
CsaV3_7G021560Melon (DHL92) v3.6.1cucmedB540
CsaV3_7G021560Watermelon (Charleston Gray)cucwcgB550
CsaV3_7G021560Watermelon (97103) v1cucwmB595
CsaV3_7G021560Watermelon (97103) v2cucwmbB596