CsaV3_7G021430 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAGTATTACTCCTCTTACCATGAAATACTCTTAGTCGGCGAGGGAGATTTCTCTTTCTCTCTCTCTTTGGCCATGTCTTTTGGCTCTGCTTCCAATATCCTCGCCACTTCTCTCGACTCCTATCCTACGTATGCCTACCTCCTTCATTTTTAACTTTTTTCTTTTTTTTTTTATTCGGTTCATCGTCTGTGTTTTCTGTTTTCTGACGGATGCGAACCGTAATGAAACGACTGAAACCCTCTCCTTTCGTTTACTGTTTATGTTTTTGCTTTCTTCATCTTCTTCATCTTCTTCTTCTTCTTTCTCTTAGCTGTGATCAGTGGTTATATCTGAGTAAATGTTGCTTTTTTTCATCTGATTTCTAATTCGATTCGTGCATTTTTTAATGTGTAGTTTAATTTGATCATTTGATTGCTGTTCTTACCTTCGTTTTGTGTCTTTTCTTTCTACATTTGGTTTAATAATTAGATGATGTGATCAGCGTTTCATTTTCTTTGATTCGATTCATGCAATCGCTTTTTTCGTTTCAGACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGTATATCCTCTTCATCCTCTTCATTGAATCCACGTTTTGAATTTCTAAGATCGAGAAAGTGGTAATTGTAAGCTGGATATGGAACTGAGTTTTGCAGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA ATGGCGTTGGATAAAACACTACAGGAATCCCATATAAACTTCACCACGCCTACTACCTCTTACCTATGCGTTTCTATTTCCCACCAAAAACCGACGTCCTTTCATTTCTTCTCCAAAACACTTTCTCAAGCTCTTCTATGTTTATCAACCCCCGGAAACCCTTCCCATGTCCGTCTCCTCACTCCGGCGAGAAGCGGATCAAACGACGTGGTGACGAGGTACAAGAATGCGAGGTTAAATTTGACGATTCTGAATGGTTTGGGTGCGTCTGTTTTGCATGGAGTCGATGCGACTAAAATGAAGTATCATACCGACTTACATATGCGGAAATTTGATCGGATCATCTTCAATTTCCCCCACGCTGGTTTCTTTGGAAGAGGGGACAGTCATTTAATGATTCGGATGCACAATAGACTTGTACGTCATTTCGTCAAGAATGCAAGCCGAATGCTTCGAGTTAATGGCGAAATCCATGTGGATCACAAAACAAAACCCCCATTTTCGGATTGGAATATTGTTCAACTCGCCTATCAAAACTCACTGACATTGATTGGTTGTGCTGATTTCAATATACAGGATTACCCTGGATATCACAACAAGAGAGGGCAGGGCAATAGATGTGATTGCCCTTTCTTTTTGGGTGAGTGCTCTACTTTCAATTTTAGTATCAACCATTCAGCTAAAAGGACACCAAGATTATTGCACATCAATAATACCTTAGATATCCAAAGAAACCTACCATATCCAGAGATCCCAATCTCAAGTCACTCCCATCTTCCATATCCTACTTCATTTGAATCAAGTTATTGA MALDKTLQESHINFTTPTTSYLCVSISHQKPTSFHFFSKTLSQALLCLSTPGNPSHVRLLTPARSGSNDVVTRYKNARLNLTILNGLGASVLHGVDATKMKYHTDLHMRKFDRIIFNFPHAGFFGRGDSHLMIRMHNRLVRHFVKNASRMLRVNGEIHVDHKTKPPFSDWNIVQLAYQNSLTLIGCADFNIQDYPGYHNKRGQGNRCDCPFFLGECSTFNFSINHSAKRTPRLLHINNTLDIQRNLPYPEIPISSHSHLPYPTSFESSY
BLAST of CsaV3_7G021430 vs. NCBI nr
Match: KGN44113.1 (hypothetical protein Csa_7G193730 [Cucumis sativus]) HSP 1 Score: 565.1 bits (1455), Expect = 1.3e-157 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. NCBI nr
Match: XP_011659738.1 (PREDICTED: uncharacterized protein At4g26485 [Cucumis sativus]) HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117 Identity = 209/233 (89.70%), Postives = 217/233 (93.13%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. NCBI nr
Match: XP_016900469.1 (PREDICTED: uncharacterized protein At4g26485-like [Cucumis melo]) HSP 1 Score: 390.6 bits (1002), Expect = 4.4e-105 Identity = 191/233 (81.97%), Postives = 204/233 (87.55%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. NCBI nr
Match: XP_022139690.1 (heavy metal-associated isoprenylated plant protein 41-like [Momordica charantia]) HSP 1 Score: 303.1 bits (775), Expect = 9.2e-79 Identity = 147/219 (67.12%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. NCBI nr
Match: XP_019196227.1 (PREDICTED: uncharacterized protein At4g26485-like isoform X2 [Ipomoea nil]) HSP 1 Score: 218.0 bits (554), Expect = 3.9e-53 Identity = 109/218 (50.00%), Postives = 139/218 (63.76%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TAIR10
Match: AT1G55790.1 (Domain of unknown function (DUF2431)) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-49 Identity = 99/200 (49.50%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TAIR10
Match: AT4G26485.1 (Domain of unknown function (DUF2431)) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-32 Identity = 69/158 (43.67%), Postives = 94/158 (59.49%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TAIR10
Match: AT1G55800.1 (Domain of unknown function (DUF2431)) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 71/165 (43.03%), Postives = 88/165 (53.33%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TAIR10
Match: AT5G56060.1 (Domain of unknown function (DUF2431)) HSP 1 Score: 115.5 bits (288), Expect = 4.9e-26 Identity = 60/143 (41.96%), Postives = 87/143 (60.84%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TAIR10
Match: AT5G56075.1 (Domain of unknown function (DUF2431)) HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20 Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. Swiss-Prot
Match: sp|F4I1X0|HIP41_ARATH (Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX=3702 GN=HIPP41 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.5e-48 Identity = 99/200 (49.50%), Postives = 120/200 (60.00%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. Swiss-Prot
Match: sp|P0C8L4|Y4648_ARATH (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.5e-32 Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. Swiss-Prot
Match: sp|O94480|BMT5_SCHPO (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bmt5 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.3e-11 Identity = 42/146 (28.77%), Postives = 70/146 (47.95%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. Swiss-Prot
Match: sp|Q3UY23|FDXA1_MOUSE (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 43/155 (27.74%), Postives = 64/155 (41.29%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. Swiss-Prot
Match: sp|Q9BRP7|FDXA1_HUMAN (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FDXACB1 PE=1 SV=3) HSP 1 Score: 53.5 bits (127), Expect = 4.2e-06 Identity = 36/129 (27.91%), Postives = 55/129 (42.64%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TrEMBL
Match: tr|A0A0A0K3N4|A0A0A0K3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G193730 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 8.6e-158 Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TrEMBL
Match: tr|A0A1S4DWW2|A0A1S4DWW2_CUCME (uncharacterized protein At4g26485-like OS=Cucumis melo OX=3656 GN=LOC103490385 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 2.9e-105 Identity = 191/233 (81.97%), Postives = 204/233 (87.55%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TrEMBL
Match: tr|F6I4W3|F6I4W3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0015g01660 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.3e-52 Identity = 102/161 (63.35%), Postives = 119/161 (73.91%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TrEMBL
Match: tr|A0A0K9QBE4|A0A0K9QBE4_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_205200 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.7e-52 Identity = 109/194 (56.19%), Postives = 133/194 (68.56%), Query Frame = 0
BLAST of CsaV3_7G021430 vs. TrEMBL
Match: tr|I1N071|I1N071_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100802899 PE=4 SV=2) HSP 1 Score: 213.4 bits (542), Expect = 6.4e-52 Identity = 110/203 (54.19%), Postives = 135/203 (66.50%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|