CsaV3_7G021330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G021330
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 9858238 .. 9859016 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACAGTTGGTAAGTTACTTACATTTGCAGCTCCTTCAGTACTCTGATGGATCAATCTTTTTTTGAATGATAGCAACTCATATTACATCTCCAATTAGGATATGCCAAGTCTTCCATGAATGATGCCTACAACTAGGTTGTAATCTTCATCAAACCTTAAGAGAACTTGAGGTATAAGGGTTAGCGTAGTGATAAGGCTCCCATCTTGACCTAGATAGTTGGAATGTAACTTCATGAGTCTCAAATATTCAATCATACTATCGTTACCTTTCCTGGTCTGTTGAAAGGTTTAAAGTAAATAATCTTCTTCAGTCCTTGAGTGTACTCTTTAAAAGACTTTAAACACCTTCCCATAAGTCTTTCGAGTGATTGTAACCCATCAACTGAGTAGCTACTTCAAAAGTCGTGGACTTGTAGAGTAGGAAAAACAAGTTCTTGTTCTTGACTTCAGGATGATACTCAACCTTTGGCTGCAACAAGCGAAGAAGATGTGTTCGAGTATATTGGTTGCACAGTTTGCAAGCCAATGCACACTGCATTCAAAGAGATTTCAAAGTTAAATGAAAACCCCATCATGCCCATCAAGATAACACATGAAAAGCTTAATGAATCACGCAATGAGGTCGCAGATGTATGGAGTCTCCTTAGCAGCATCAACATCAATGTTGTTTCAGTGTGCCATGAACATGAAACATTAGAACACAAGATGGACACTCTCCTCATAAAGCAAGACACGATGGCTTTCACTCTCCTCATAAAGCGAGGCGGGATGTGA

mRNA sequence

ATGTTGACAGTTGGTAAGTTACTTACATTTGCAGCTCCTTCAGATGATACTCAACCTTTGGCTGCAACAAGCGAAGAAGATGTGTTCGAGTATATTGGTTGCACAGTTTGCAAGCCAATGCACACTGCATTCAAAGAGATTTCAAAGTTAAATGAAAACCCCATCATGCCCATCAAGATAACACATGAAAAGCTTAATGAATCACGCAATGAGGTCGCAGATGTATGGAGTCTCCTTAGCAGCATCAACATCAATGTTGTTTCAGTGTGCCATGAACATGAAACATTAGAACACAAGATGGACACTCTCCTCATAAAGCAAGACACGATGGCTTTCACTCTCCTCATAAAGCGAGGCGGGATGTGA

Coding sequence (CDS)

ATGTTGACAGTTGGTAAGTTACTTACATTTGCAGCTCCTTCAGATGATACTCAACCTTTGGCTGCAACAAGCGAAGAAGATGTGTTCGAGTATATTGGTTGCACAGTTTGCAAGCCAATGCACACTGCATTCAAAGAGATTTCAAAGTTAAATGAAAACCCCATCATGCCCATCAAGATAACACATGAAAAGCTTAATGAATCACGCAATGAGGTCGCAGATGTATGGAGTCTCCTTAGCAGCATCAACATCAATGTTGTTTCAGTGTGCCATGAACATGAAACATTAGAACACAAGATGGACACTCTCCTCATAAAGCAAGACACGATGGCTTTCACTCTCCTCATAAAGCGAGGCGGGATGTGA

Protein sequence

MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKITHEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGGM
Homology
[Close]
BLAST of CsaV3_7G021330 vs. NCBI nr
Match: KGN44102.1 (hypothetical protein Csa_7G187690 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI 60
           MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI
Sbjct: 1   MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI 60

Query: 61  THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG 120
           THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG
Sbjct: 61  THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG 120

Query: 121 M 122
           M
Sbjct: 121 M 121

[Close]
BLAST of CsaV3_7G021330 vs. TrEMBL
Match: tr|A0A0A0K727|A0A0A0K727_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G187690 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 6.8e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI 60
           MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI
Sbjct: 1   MLTVGKLLTFAAPSDDTQPLAATSEEDVFEYIGCTVCKPMHTAFKEISKLNENPIMPIKI 60

Query: 61  THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG 120
           THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG
Sbjct: 61  THEKLNESRNEVADVWSLLSSININVVSVCHEHETLEHKMDTLLIKQDTMAFTLLIKRGG 120

Query: 121 M 122
           M
Sbjct: 121 M 121

The following BLAST results are available for this feature:
BLAST of CsaV3_7G021330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44102.11.0e-61100.00hypothetical protein Csa_7G187690 [Cucumis sativus][more]
BLAST of CsaV3_7G021330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G021330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K727|A0A0A0K727_CUCSA6.8e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G187690 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G021330.1CsaV3_7G021330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G021330CSPI07G09210Wild cucumber (PI 183967)cpicucB414
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G021330Silver-seed gourdcarcucB0091
CsaV3_7G021330Cucumber (Gy14) v2cgybcucB347
CsaV3_7G021330Cucumber (Gy14) v1cgycucB515
CsaV3_7G021330Cucurbita maxima (Rimu)cmacucB0054
CsaV3_7G021330Cucurbita maxima (Rimu)cmacucB0588
CsaV3_7G021330Cucurbita moschata (Rifu)cmocucB0040
CsaV3_7G021330Cucurbita moschata (Rifu)cmocucB0577
CsaV3_7G021330Cucurbita pepo (Zucchini)cpecucB0735
CsaV3_7G021330Cucurbita pepo (Zucchini)cpecucB0992
CsaV3_7G021330Bottle gourd (USVL1VR-Ls)cuclsiB540
CsaV3_7G021330Melon (DHL92) v3.5.1cucmeB552
CsaV3_7G021330Melon (DHL92) v3.6.1cucmedB540
CsaV3_7G021330Watermelon (Charleston Gray)cucwcgB550
CsaV3_7G021330Watermelon (97103) v1cucwmB595
CsaV3_7G021330Watermelon (97103) v2cucwmbB596
CsaV3_7G021330Wax gourdcucwgoB736