CsaV3_7G016250 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTAAAAGAGAAGGTTGAACTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGGTTGGCACAAATTTGGGAAGTAAGTTTTATAATTAATCTTTCACGAAACGCATGTAAACAGAGTACAAGGTTTTAGCCTCTTTTGATCGCAGAATTATAATGTAAATTCTTATATTGATTTGAGTTAATTTATTTATGAAGAACAAAAGAATTAGTCTTATGTATGACAAAAGGTTCATGATTTTGAAAAGAAAAAAAAAAGACGACTTGAAATCAATAGGATCAACAAAATTTGTTCCTGGAATAATAACTGTAACGAGAGTGGAAAAAAGAACTCGAATTTCGGAATTATCACCAAAATTCGTCTCCTCCTTTTTCTCAGTTCATTATAAAATTTCAATCTTCTTCATTTTAAATTCAAACACATTAAGTGGAAATATGAAACTAACTTTTTACAAAGTGGATAAAAAAGATATATGGGAAACACCAAGAGCTATCCACAAAGAAAAAGATAGGGAAACATTAGAATCTAGATTAATGTATTTATAGTTTAGTTTGAACATCCAAGTTCGTGTTAATTTTCATGAGATTCTGTAAAACTATAATTACACTTTTCATTTGGGTACTCTTTCCAAAATTTATGGAAGACTGAAAAGGGATTTTTTTTAAAAAAAAACTAACCATGTAGACTAATTGTTAGATTAATCAATAGTCATGAACTAAATTTAAACATTTAAGTGAACATGAACTGAACACATTAAAAGATACGAGAACTAAATTAAAATTTCAACCCTAATTAAAAAAAACAACAATTATCATAGAATTGAATTTTGAGTTCTCGGATATGAAATAAAATCTCCAATGTAGAAAGAAATATGCATTTTTTTAAAAAAATACATGGAACATAACCAATGTTGTGGATGATCAAGGACTGGAGGTAATGGGAGATCCAATGGTAAGGAAGTTGGTAATGTGCAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATCTGCCAAAGAAGGTGCTGCTTCTTCCTCAATGAAAATAATTCTTTGATTTCTTATCAAGATTTCGTCTTCATTTGTCTAATTTTTTCAAAGCTAGATTTCTATTGATTTTATAACGCAAGTTTCAGGTATTAAAGGAAGATAGAAGTTGATTTTTTTTTTTTTTCTAACAGGAAAAAGAATACAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAATGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGGTATATAATTCTATAAAATCATTTGTAAATTTTCCTATATTTTATTGGCAACAAAAATATTTTCTTAAATTATCCATTTGTGCATATGGTCATGATCTTATCAGCTGTTGGGGCAGAGTGAGAAATGGAGGATGAAAAAGCTCGAGGAATTGAATAAGAATATAGAATCAATGAACTGA ATGGAAGTAAAAGAGAAGGTTGAACTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGGTTGGCACAAATTTGGGAAGAAAAAGAATACAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAATGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGCTGTTGGGGCAGAGTGAGAAATGGAGGATGAAAAAGCTCGAGGAATTGAATAAGAATATAGAATCAATGAACTGA ATGGAAGTAAAAGAGAAGGTTGAACTTCAGTTAACCCGTGCAGAGGAAGAAGCCAAACGGTTGGCACAAATTTGGGAAGAAAAAGAATACAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAATGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGCTGTTGGGGCAGAGTGAGAAATGGAGGATGAAAAAGCTCGAGGAATTGAATAAGAATATAGAATCAATGAACTGA MEVKEKVELQLTRAEEEAKRLAQIWEEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESMN
BLAST of CsaV3_7G016250 vs. NCBI nr
Match: XP_004150485.1 (PREDICTED: uncharacterized protein LOC101217540 [Cucumis sativus] >KGN52204.1 hypothetical protein Csa_5G615265 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25 Identity = 77/114 (67.54%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. NCBI nr
Match: XP_008446775.1 (PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24 Identity = 75/114 (65.79%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. NCBI nr
Match: XP_022150510.1 (uncharacterized protein LOC111018644 [Momordica charantia]) HSP 1 Score: 105.5 bits (262), Expect = 8.2e-20 Identity = 66/112 (58.93%), Postives = 72/112 (64.29%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. NCBI nr
Match: XP_007162863.1 (hypothetical protein PHAVU_001G187400g [Phaseolus vulgaris] >ESW34857.1 hypothetical protein PHAVU_001G187400g [Phaseolus vulgaris]) HSP 1 Score: 92.0 bits (227), Expect = 9.3e-16 Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. NCBI nr
Match: XP_018853406.1 (PREDICTED: uncharacterized protein LOC109015383 [Juglans regia]) HSP 1 Score: 89.0 bits (219), Expect = 7.9e-15 Identity = 59/112 (52.68%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TAIR10
Match: AT5G03660.1 (Family of unknown function (DUF662) ) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-10 Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TAIR10
Match: AT3G52900.1 (Family of unknown function (DUF662) ) HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09 Identity = 35/76 (46.05%), Postives = 54/76 (71.05%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TAIR10
Match: AT2G36410.1 (Family of unknown function (DUF662) ) HSP 1 Score: 57.0 bits (136), Expect = 6.0e-09 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TAIR10
Match: AT3G52920.1 (Family of unknown function (DUF662) ) HSP 1 Score: 55.1 bits (131), Expect = 2.3e-08 Identity = 29/53 (54.72%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TAIR10
Match: AT2G27740.1 (Family of unknown function (DUF662) ) HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07 Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TrEMBL
Match: tr|A0A0A0KTG1|A0A0A0KTG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615265 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25 Identity = 77/114 (67.54%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TrEMBL
Match: tr|A0A1S3BFW5|A0A1S3BFW5_CUCME (uncharacterized protein LOC103489402 OS=Cucumis melo OX=3656 GN=LOC103489402 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24 Identity = 75/114 (65.79%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TrEMBL
Match: tr|V7CXF1|V7CXF1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G187400g PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.2e-16 Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TrEMBL
Match: tr|A0A2I4HB71|A0A2I4HB71_9ROSI (uncharacterized protein LOC109015383 OS=Juglans regia OX=51240 GN=LOC109015383 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.2e-15 Identity = 59/112 (52.68%), Postives = 67/112 (59.82%), Query Frame = 0
BLAST of CsaV3_7G016250 vs. TrEMBL
Match: tr|A0A103XH80|A0A103XH80_CYNCS (Golgin, RAB6-interacting OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_007287 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.9e-15 Identity = 49/76 (64.47%), Postives = 61/76 (80.26%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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