CsaV3_7G016150 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G016150
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 7934002 .. 7934643 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGGAGCAGGCATGAAGAACTGAGGTGGGCAAAGAAGAAGGATCTATATTTTCTGGGATTTGATATGCTTCTCCCCACCATCAGTTTCATTGGAGCTTCTTACATCTCTTATGGTTGATGAAGAAGCTCGATGGTTTGAAGTTTGTGTTAGTAGACTGAGCTGTTCAGGTTGCTCTTGATACTGATAATGACGAAAAGTTAAATTGAAGAATCTGCAACCTGCTCCTGCAAGATCTTGGACGAAGGTATGGGATATTTTAATGATTTTACATGAACTTGATAAAAACGTGATAAAATGAGATGTTAATAAGTAAGTTATTTTTGAACAAAGTAAATATAGTTTTAAGCATTAACATCGTGCTATCATAATGATAAAATGAGAACATTGTTTTGTGTCATCTAACTCCTATGGTACCCTTAATTGTTTGCAACTATTTTCTTCTTTTTTTTTTTGCACTTGGAAACACTTATTTAAACGCCAAGAAAAAACTCAATCCAAATACGCCCTTAATATCTTTTTTGGATTATCCTTCAGTTTGGCTTCTTGTCTTCCATGAAGTTTTGTTCCAGTTCTCAGTTTATTTTGTTTCATTTTCAGCGTATGGAAGGATATGGTTTTTCGTCACTGCAAAACTAG

mRNA sequence

ATGGCAGGGAGCAGGCATGAAGAACTGAGGTGGGCAAAGAAGAAGGATCTATATTTTCTGGGATTTGATATGCTTCTCCCCACCATCAGTTTCATTGGAGCTTCTTACATCTCTTATGTTAAATTGAAGAATCTGCAACCTGCTCCTGCAAGATCTTGGACGAAGCGTATGGAAGGATATGGTTTTTCGTCACTGCAAAACTAG

Coding sequence (CDS)

ATGGCAGGGAGCAGGCATGAAGAACTGAGGTGGGCAAAGAAGAAGGATCTATATTTTCTGGGATTTGATATGCTTCTCCCCACCATCAGTTTCATTGGAGCTTCTTACATCTCTTATGTTAAATTGAAGAATCTGCAACCTGCTCCTGCAAGATCTTGGACGAAGCGTATGGAAGGATATGGTTTTTCGTCACTGCAAAACTAG

Protein sequence

MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGYGFSSLQN
Homology
[Close]
BLAST of CsaV3_7G016150 vs. NCBI nr
Match: KGN52194.1 (hypothetical protein Csa_5G615182 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY 60
          MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY
Sbjct: 1  MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY 60

Query: 61 GFSSLQN 68
          GFSSLQN
Sbjct: 61 GFSSLQN 67

[Close]
BLAST of CsaV3_7G016150 vs. TrEMBL
Match: tr|A0A0A0KTF4|A0A0A0KTF4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615182 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-31
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY 60
          MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY
Sbjct: 1  MAGSRHEELRWAKKKDLYFLGFDMLLPTISFIGASYISYVKLKNLQPAPARSWTKRMEGY 60

Query: 61 GFSSLQN 68
          GFSSLQN
Sbjct: 61 GFSSLQN 67

The following BLAST results are available for this feature:
BLAST of CsaV3_7G016150 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52194.14.0e-31100.00hypothetical protein Csa_5G615182 [Cucumis sativus][more]
BLAST of CsaV3_7G016150 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G016150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G016150 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KTF4|A0A0A0KTF4_CUCSA2.7e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G615182 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G016150.1CsaV3_7G016150.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G016150Cucumber (Chinese Long) v3cuccucB209
CsaV3_7G016150Silver-seed gourdcarcucB0924
CsaV3_7G016150Silver-seed gourdcarcucB0946
CsaV3_7G016150Cucumber (Gy14) v2cgybcucB246
CsaV3_7G016150Cucumber (Gy14) v2cgybcucB347
CsaV3_7G016150Cucumber (Gy14) v1cgycucB480
CsaV3_7G016150Cucurbita maxima (Rimu)cmacucB0052
CsaV3_7G016150Cucurbita maxima (Rimu)cmacucB0585
CsaV3_7G016150Cucurbita moschata (Rifu)cmocucB0038
CsaV3_7G016150Cucurbita moschata (Rifu)cmocucB0575
CsaV3_7G016150Cucurbita pepo (Zucchini)cpecucB0733
CsaV3_7G016150Cucurbita pepo (Zucchini)cpecucB0991
CsaV3_7G016150Wild cucumber (PI 183967)cpicucB309
CsaV3_7G016150Bottle gourd (USVL1VR-Ls)cuclsiB539
CsaV3_7G016150Bottle gourd (USVL1VR-Ls)cuclsiB559
CsaV3_7G016150Melon (DHL92) v3.5.1cucmeB528
CsaV3_7G016150Melon (DHL92) v3.5.1cucmeB556
CsaV3_7G016150Melon (DHL92) v3.6.1cucmedB515
CsaV3_7G016150Melon (DHL92) v3.6.1cucmedB528
CsaV3_7G016150Watermelon (Charleston Gray)cucwcgB549
CsaV3_7G016150Watermelon (Charleston Gray)cucwcgB586
CsaV3_7G016150Watermelon (97103) v1cucwmB594
CsaV3_7G016150Watermelon (97103) v1cucwmB620
CsaV3_7G016150Watermelon (97103) v2cucwmbB564
CsaV3_7G016150Watermelon (97103) v2cucwmbB595
CsaV3_7G016150Wax gourdcucwgoB734