CsaV3_7G013910 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G013910
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAspartic acid proteinase inhibitor
Locationchr7 : 7191763 .. 7192414 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAGAACATACCACAAACCATATTACTATCTTTCTTCAAGTGGCCGGTTTACTTTTTTTTTTTAAAGAGAAATCAAGGTCATGGCTGCCGCTGGAATTGGACAACCTTCGATCGTGATTGGTACCTGGAATGCGATACCGAATGACGATCCAAAAGTAATAGAGATGGCAGAGTATGCAGTGAAAGAACAGGGAGAAGAATTGATCCTGAACAGTGTACAAGCTGGACAGATCGTTGAGGTGTTTTTGAGTGGCGACACTTATTACAACCTTCTCATCCTTGCTCATCATCCTCACACATTTCAGGGGTTTTATAGCACCATTGTGATGGAAAATACATCCAAAAATGTGAAGCAGGTCGTATCTTTTGTTCCTCTTCGTTAATGATGCAATGATGATGGATGCATCAATGATCTACAATCTCAACAAATTATCTACTCTCTCTCACTTGTTTATGTGTATGCATGTTATACATGCAATTGGAATGAAAAGTAGTACAAATTTAGATAAAATAAAAGTATAAAAAGCAGGTATGCTTTTGGTGTGTTTTCATCTAAATTCTCTCTCGTTTTAATTTATCTAGACCCAAAATTGAGACAGATTCAAAATCTAGAATTACGCCCACATGATGACTTCAACATTTTCTTGCAC

mRNA sequence

ATGGCTGCCGCTGGAATTGGACAACCTTCGATCGTGATTGGTACCTGGAATGCGATACCGAATGACGATCCAAAAGTAATAGAGATGGCAGAGTATGCAGTGAAAGAACAGGGAGAAGAATTGATCCTGAACAGTGTACAAGCTGGACAGATCGTTGAGGTGTTTTTGAGTGGCGACACTTATTACAACCTTCTCATCCTTGCTCATCATCCTCACACATTTCAGGGGTTTTATAGCACCATTGTGATGGAAAATACATCCAAAAATGTGAAGCAGGTCGTATCTTTTGTTCCTCTTCGTTAA

Coding sequence (CDS)

ATGGCTGCCGCTGGAATTGGACAACCTTCGATCGTGATTGGTACCTGGAATGCGATACCGAATGACGATCCAAAAGTAATAGAGATGGCAGAGTATGCAGTGAAAGAACAGGGAGAAGAATTGATCCTGAACAGTGTACAAGCTGGACAGATCGTTGAGGTGTTTTTGAGTGGCGACACTTATTACAACCTTCTCATCCTTGCTCATCATCCTCACACATTTCAGGGGTTTTATAGCACCATTGTGATGGAAAATACATCCAAAAATGTGAAGCAGGTCGTATCTTTTGTTCCTCTTCGTTAA

Protein sequence

MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEELILNSVQAGQIVEVFLSGDTYYNLLILAHHPHTFQGFYSTIVMENTSKNVKQVVSFVPLR
Homology
[Close]
BLAST of CsaV3_7G013910 vs. NCBI nr
Match: XP_011658473.1 (PREDICTED: uncharacterized protein LOC105436020 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEELILNSVQAGQIVEVFLSGDT 60
           MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEELILNSVQAGQIVEVFLSGDT
Sbjct: 1   MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEELILNSVQAGQIVEVFLSGDT 60

Query: 61  YYNLLILAHHPHTFQGFYSTIVMENTSKNVKQVVSFVPLR 101
           YYNLLILAHHPHTFQGFYSTIVMENTSKNVKQVVSFVPLR
Sbjct: 61  YYNLLILAHHPHTFQGFYSTIVMENTSKNVKQVVSFVPLR 100

[Close]
BLAST of CsaV3_7G013910 vs. NCBI nr
Match: XP_004151410.1 (PREDICTED: uncharacterized protein LOC101213950 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 78/100 (78.00%), Postives = 83/100 (83.00%), Query Frame = 0 

Query: 1   MAAAGIGQPSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGD 60
           M  AG G PSIVIG+ N I  DDPKVIEMAEYAVKEQGE+ LILNSV  GQIV VFL G+
Sbjct: 1   MDTAGFG-PSIVIGSCNPILKDDPKVIEMAEYAVKEQGEDHLILNSVADGQIVTVFLGGN 60

Query: 61  TYYNLLILAHHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           TYYNLLILAHHP TFQGFYS IV+ENTSKNVK+VVSF  L
Sbjct: 61  TYYNLLILAHHPRTFQGFYSAIVLENTSKNVKEVVSFFRL 99

[Close]
BLAST of CsaV3_7G013910 vs. NCBI nr
Match: ABB96307.1 (aspartic acid proteinase inhibitor, partial [Cucurbita maxima])

HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 9   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 68

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  +++SFVPL
Sbjct: 69  AKHSPHEFSKFYNVVVLEKASDNSLKLISFVPL 101

[Close]
BLAST of CsaV3_7G013910 vs. NCBI nr
Match: AAT67162.1 (aspartic protease inhibitor [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 9   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 68

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  ++V+FVPL
Sbjct: 69  AKHSPHEFSKFYNVVVLEKASDNSLKLVAFVPL 101

[Close]
BLAST of CsaV3_7G013910 vs. NCBI nr
Match: 2KXG_A (Chain A, The solution structure of the squash aspartic acid proteinase inhibitor (SQAPI))

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 2   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 61

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  ++V+FVPL
Sbjct: 62  AKHSPHEFSKFYNVVVLEKASDNSLKLVAFVPL 94

[Close]
BLAST of CsaV3_7G013910 vs. TrEMBL
Match: tr|Q2V8I8|Q2V8I8_CUCMA (Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 9   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 68

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  +++SFVPL
Sbjct: 69  AKHSPHEFSKFYNVVVLEKASDNSLKLISFVPL 101

[Close]
BLAST of CsaV3_7G013910 vs. TrEMBL
Match: tr|Q6DLC9|Q6DLC9_CUCMA (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 9   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 68

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  ++V+FVPL
Sbjct: 69  AKHSPHEFSKFYNVVVLEKASDNSLKLVAFVPL 101

[Close]
BLAST of CsaV3_7G013910 vs. TrEMBL
Match: tr|O81131|O81131_CUCMA (Aspartic proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API-1 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.5e-11
Identity = 42/93 (45.16%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     D YYNL++ 
Sbjct: 1   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPHWDNYYNLILS 60

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  ++V+FVPL
Sbjct: 61  AKHSPHEFSKFYNVVVLEKASDNSLKLVAFVPL 93

[Close]
BLAST of CsaV3_7G013910 vs. TrEMBL
Match: tr|O81132|O81132_CUCMA (Aspartic proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API-2 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     + YYNL++ 
Sbjct: 1   PGPAIGEVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPDWNNYYNLILS 60

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  +++SFVPL
Sbjct: 61  AKHSPHEFSKFYNVVVLEKASDNSLKLISFVPL 93

[Close]
BLAST of CsaV3_7G013910 vs. TrEMBL
Match: tr|Q6DLC8|Q6DLC8_CUCMA (Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.7e-11
Identity = 41/93 (44.09%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 9   PSIVIGTWNAIPNDDPKVIEMAEYAVKEQGEE-LILNSVQAGQIVEVFLSGDTYYNLLIL 68
           P   IG    I  +DP+V E+AE+A+K+  E+ LIL  V AGQI++     + YYNL++ 
Sbjct: 9   PGPAIGGVIGISVNDPRVKEIAEFALKQHAEQNLILAGVDAGQIIKGIPDWNNYYNLILS 68

Query: 69  A-HHPHTFQGFYSTIVMENTSKNVKQVVSFVPL 100
           A H PH F  FY+ +V+E  S N  +++SFVPL
Sbjct: 69  AKHSPHEFSKFYNVVVLEKASDNSLKLISFVPL 101

The following BLAST results are available for this feature:
BLAST of CsaV3_7G013910 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011658473.11.1e-48100.00PREDICTED: uncharacterized protein LOC105436020 [Cucumis sativus][more]
XP_004151410.12.7e-3178.00PREDICTED: uncharacterized protein LOC101213950 [Cucumis sativus][more]
ABB96307.13.1e-1145.16aspartic acid proteinase inhibitor, partial [Cucurbita maxima][more]
AAT67162.15.3e-1145.16aspartic protease inhibitor [Cucurbita maxima][more]
2KXG_A5.3e-1145.16Chain A, The solution structure of the squash aspartic acid proteinase inhibitor... [more]
BLAST of CsaV3_7G013910 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G013910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G013910 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q2V8I8|Q2V8I8_CUCMA2.0e-1145.16Aspartic acid proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API... [more]
tr|Q6DLC9|Q6DLC9_CUCMA3.5e-1145.16Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=1 SV=1[more]
tr|O81131|O81131_CUCMA3.5e-1145.16Aspartic proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API-1 PE... [more]
tr|O81132|O81132_CUCMA5.9e-1144.09Aspartic proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=API-2 PE... [more]
tr|Q6DLC8|Q6DLC8_CUCMA7.7e-1144.09Aspartic protease inhibitor OS=Cucurbita maxima OX=3661 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004869cysteine-type endopeptidase inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR000010Cystatin_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G013910.1CsaV3_7G013910.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000010Cystatin domainPFAMPF16845SQAPIcoord: 22..97
e-value: 2.2E-8
score: 34.2
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 8..100
e-value: 3.6E-30
score: 105.8
NoneNo IPR availableSUPERFAMILYSSF54403Cystatin/monellincoord: 14..99

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G013910Cucumber (Chinese Long) v3cuccucB219
CsaV3_7G013910Wild cucumber (PI 183967)cpicucB374
CsaV3_7G013910Melon (DHL92) v3.6.1cucmedB574