CsaV3_7G011620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G011620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 6453611 .. 6454542 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGGCCAAGAGTCGAGAGCTCCCCATGCAATTTCTAATATCGAAGGAACCGACCCATTTGGCTGAAAGCAGGTTGGCTCTTCTACTTTCTACGGGCGATTGTTATGTGGCTTCGGCCAAGTGTCAAGAGTTCCACATGCAGTTTCTAATACCGAAGGAACCCAAAGTGGCTTGGCTCTCCTAATTTCCACGGGCGATTGTAATGTGATTTTGGTCAAGAGTCGAGAGTTCCCCACGCAGTTCTGAATCGAAAGAACCCAAAGCATCCTATCCCAAACGGCTTGGCTCTCTTACTTTGTATAGGTGATTGTAATGTGGTTTCGGCCCAGAGTCGAGAGTTTCCCATGCAGTTTCTGATACCGAAGGAACCTGAAGAATTCTAGCCCGAAGCGACTTGGCTCTTCTACTTTTTACGGGCGATTATGGCTTCGGGCGAGAGTTGAGAGTTCCCTATGAAAATTTTGATAACAATGGAACCAGATGCATTCTAGCCCGAAGTGGCTTGGCTCTCCTAATTTCTAGGGGTGAATTTATTGTGGCTTCGGTCGAGAGTCGAGAGTTCAACACGCAGGATCTGACACTAAAGGAACCCAACACATTCTTGCTCGAAGTGGCTTGGTTCTCCTACTTTCTACGGGCCATGGTAATGTGGCTTGGGCTAAGGCTCAGAGTTCCTCATGCTATTTCCAATATTGAAGGAGCCCGACCCATTCTGGCCTGAAGCGGCTTGGCTCTCTTACTTTCTACCTGCGATTCTTATGTTGCTTCGGCCAAGAGTCGAGAGTTCTCCACACAGTTTCTCATATCGAAAGAATCCAATGCATTCTTGCCCAAAGCGACTTGGCTCTCCTACTTTCTAAGGGTGATTATGGCTTCAGACGAGAGTTGAGAGTTCCCCATGATGGTTCTCATATCAATGCAAACTGA

mRNA sequence

ATGGCTTGGGCCAAGAGTCGAGAGCTCCCCATGCAATTTCTAATATCGAAGGAACCGACCCATTTGGCTGAAAGCAGGTTGGCTCTTCTACTTTCTACGGGCGATTGTTATGTGGCTTCGGCCAAAGTCGAGAGTTCCCCACGCAGTTCTGAATCGAAAGAACCCAAAGCATCCTATCCCAAACGGCTTGGCTCTCTTACTTTGTATAGAATTCTAGCCCGAAGCGACTTGGCTCTTCTACTTTTTACGGGCGATTATGGCTTCGGGCGAGAGTTGAGAGTTCCCTATGAAAATTTTGATAACAATGGAACCAGATGCATTCTAGCCCGAAGTGGCTTGGCTCTCCTAATTTCTAGGGGTGAATTTATTGTGGCTTCGGTCGAGAGTCGAGAGTTCAACACGCAGGATCTGACACTAAAGGAACCCAACACATTCTTGCTCGAAGTGGCTTGGAGCCCGACCCATTCTGGCCTGAAGCGGCTTGGCTCTCTTACTTTCTACCTGCGATTCTTATGTTGCTTCGGCCAAGAGTCGAGAGTTCTCCACACAGTTTCTCATATCGAAAGAATCCAATGCATTCTTGCCCAAAGCGACTTGGCTCTCCTACTTTCTAAGGGTGATTATGGCTTCAGACGAGAGTTGAGAGTTCCCCATGATGGTTCTCATATCAATGCAAACTGA

Coding sequence (CDS)

ATGGCTTGGGCCAAGAGTCGAGAGCTCCCCATGCAATTTCTAATATCGAAGGAACCGACCCATTTGGCTGAAAGCAGGTTGGCTCTTCTACTTTCTACGGGCGATTGTTATGTGGCTTCGGCCAAAGTCGAGAGTTCCCCACGCAGTTCTGAATCGAAAGAACCCAAAGCATCCTATCCCAAACGGCTTGGCTCTCTTACTTTGTATAGAATTCTAGCCCGAAGCGACTTGGCTCTTCTACTTTTTACGGGCGATTATGGCTTCGGGCGAGAGTTGAGAGTTCCCTATGAAAATTTTGATAACAATGGAACCAGATGCATTCTAGCCCGAAGTGGCTTGGCTCTCCTAATTTCTAGGGGTGAATTTATTGTGGCTTCGGTCGAGAGTCGAGAGTTCAACACGCAGGATCTGACACTAAAGGAACCCAACACATTCTTGCTCGAAGTGGCTTGGAGCCCGACCCATTCTGGCCTGAAGCGGCTTGGCTCTCTTACTTTCTACCTGCGATTCTTATGTTGCTTCGGCCAAGAGTCGAGAGTTCTCCACACAGTTTCTCATATCGAAAGAATCCAATGCATTCTTGCCCAAAGCGACTTGGCTCTCCTACTTTCTAAGGGTGATTATGGCTTCAGACGAGAGTTGAGAGTTCCCCATGATGGTTCTCATATCAATGCAAACTGA

Protein sequence

MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYPKRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRGEFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRVLHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN
Homology
[Close]
BLAST of CsaV3_7G011620 vs. NCBI nr
Match: KGN44050.1 (hypothetical protein Csa_7G140940 [Cucumis sativus])

HSP 1 Score: 452.6 bits (1163), Expect = 7.9e-124
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP 60
           MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP
Sbjct: 1   MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP 60

Query: 61  KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG 120
           KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG
Sbjct: 61  KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG 120

Query: 121 EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV 180
           EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV
Sbjct: 121 EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV 180

Query: 181 LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN 227
           LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN
Sbjct: 181 LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN 226

[Close]
BLAST of CsaV3_7G011620 vs. NCBI nr
Match: KGN44403.1 (hypothetical protein Csa_7G279850 [Cucumis sativus])

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-15
Identity = 75/185 (40.54%), Postives = 88/185 (47.57%), Query Frame = 0 

Query: 36  CYVASAKVESSP-RSSESKEPKASYPKRLGSLTLYRILARSDLALLLFTGDYGFGRELRV 95
           C VAS K    P +    KEP A +PK            R+    L   GDYGF RE  V
Sbjct: 285 CNVASTKSREFPTKVLIPKEPDALWPK----AAWLSYFLRAIFMWLRPRGDYGFRRESEV 344

Query: 96  PYENFDNNGTRCILARSGLALLISRGEFIVASVESREFNTQDLTLKEPNTFLLEVAW--- 155
           P      + TRCILA SG ALL+S  +F VAS +SREF  Q L    P  F    AW   
Sbjct: 345 PDAGSSIDATRCILAHSGFALLLSTSDFYVASAKSREFPMQFLI---PKKFKPVAAWISY 404

Query: 156 ---SPTHSG------LKRLGSLTFYLRFLCCFGQESRVLHTVSHIERIQCILAQSDLALL 208
              +   SG       +RL S  F  +  C F +ESRVLHT  +IE  + ILA    ALL
Sbjct: 405 FLRAIMASGESQKFPTQRLRSPLFLGQLYCSFRRESRVLHTSFNIEGTRHILAWIGFALL 462

[Close]
BLAST of CsaV3_7G011620 vs. NCBI nr
Match: KGN44395.1 (hypothetical protein Csa_7G279770 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-09
Identity = 72/213 (33.80%), Postives = 91/213 (42.72%), Query Frame = 0 

Query: 41  AKVESSPRSSESKEPKASYPKRLGSLTLYRILARSDLALLLFTGDY---GFGRELRVPYE 100
           ++VESSPRSS  +  ++             ILARS LALL FTGD+       ++R P  
Sbjct: 5   SRVESSPRSSNIQRTQS-------------ILARSSLALLPFTGDFNQASSAMQVRGP-- 64

Query: 101 NFDNNGTRCILARSGLALLISRGEF-------IVASVESREFNTQDLTLKEPNTFLLEVA 160
                 T  I+A+S L LL+S   +       IVA  ESREFNTQDLTLKEP+ F  +VA
Sbjct: 65  ----KRTLHIMAQSDLVLLLSTTGYAFGESVCIVALAESREFNTQDLTLKEPDAFFTKVA 124

Query: 161 WSPTHSGLKRLGSLTFYLRFLCCF-----------------------------------G 209
           W            L+++LR                                         
Sbjct: 125 W------------LSYFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSESRD 184

[Close]
BLAST of CsaV3_7G011620 vs. NCBI nr
Match: KGN44397.1 (hypothetical protein Csa_7G279790 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-08
Identity = 48/151 (31.79%), Postives = 71/151 (47.02%), Query Frame = 0 

Query: 88  FGRELRVPYENFDNNGTRCILARSGLALLISRGEFIVASVESREFNTQDLTLKEPNTFLL 147
           + +E+RVP+   D    + IL ++     + +    ++ +ES+EF  Q LTLKEPN F L
Sbjct: 14  YSQEMRVPHAVSDTKEIQRILPKATSLSCVLQTTMALSEIESQEFPAQALTLKEPNAFFL 73

Query: 148 -------------EVAWSPTHSGLKRLGSLTFYLRFLCCFGQES------------RVLH 207
                          AW+ +    +           LC   + S            RV H
Sbjct: 74  RSGLALLLSSGDGHEAWAKS----REFPMQILIFGTLCILARSSLARLRSTGNGHLRVPH 133

Query: 208 TVSHIERIQCILAQSDLALLLSKGDYGFRRE 214
            +S+ E I+ ILA++DL LLLS GDYGF+RE
Sbjct: 134 AISNNEGIRHILARNDLILLLSIGDYGFKRE 160

[Close]
BLAST of CsaV3_7G011620 vs. NCBI nr
Match: KGN44401.1 (hypothetical protein Csa_7G279830 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 1.4e-08
Identity = 59/138 (42.75%), Postives = 71/138 (51.45%), Query Frame = 0 

Query: 24  ESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYPKRLG-SLTLYRILARSD------ 83
           +S LALLLST D YVASAK    P   +   PK   P     S  L  I+A  +      
Sbjct: 78  QSGLALLLSTSDFYVASAKSREFP--MQFLIPKKFKPVAAWISYFLRAIMASGESQKFPT 137

Query: 84  --LALLLFTGDY--GFGRELRVPYENFDNNGTRCILARSGLALLISRGEFIVASVESREF 143
             L   LF G     F RE RV + +F+  GTR ILA  G ALL+S  +F VAS +S E 
Sbjct: 138 QRLRSPLFLGQLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDFYVASAKSPEL 197

Query: 144 NTQDLTLKEPNTFLLEVA 151
           +T  L  KEP+ FL E A
Sbjct: 198 HTHFLIPKEPDAFLPEAA 213

[Close]
BLAST of CsaV3_7G011620 vs. TrEMBL
Match: tr|A0A0A0K328|A0A0A0K328_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G140940 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 5.2e-124
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 

Query: 1   MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP 60
           MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP
Sbjct: 1   MAWAKSRELPMQFLISKEPTHLAESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYP 60

Query: 61  KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG 120
           KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG
Sbjct: 61  KRLGSLTLYRILARSDLALLLFTGDYGFGRELRVPYENFDNNGTRCILARSGLALLISRG 120

Query: 121 EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV 180
           EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV
Sbjct: 121 EFIVASVESREFNTQDLTLKEPNTFLLEVAWSPTHSGLKRLGSLTFYLRFLCCFGQESRV 180

Query: 181 LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN 227
           LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN
Sbjct: 181 LHTVSHIERIQCILAQSDLALLLSKGDYGFRRELRVPHDGSHINAN 226

[Close]
BLAST of CsaV3_7G011620 vs. TrEMBL
Match: tr|A0A0A0K4J2|A0A0A0K4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.1e-15
Identity = 75/185 (40.54%), Postives = 88/185 (47.57%), Query Frame = 0 

Query: 36  CYVASAKVESSP-RSSESKEPKASYPKRLGSLTLYRILARSDLALLLFTGDYGFGRELRV 95
           C VAS K    P +    KEP A +PK            R+    L   GDYGF RE  V
Sbjct: 285 CNVASTKSREFPTKVLIPKEPDALWPK----AAWLSYFLRAIFMWLRPRGDYGFRRESEV 344

Query: 96  PYENFDNNGTRCILARSGLALLISRGEFIVASVESREFNTQDLTLKEPNTFLLEVAW--- 155
           P      + TRCILA SG ALL+S  +F VAS +SREF  Q L    P  F    AW   
Sbjct: 345 PDAGSSIDATRCILAHSGFALLLSTSDFYVASAKSREFPMQFLI---PKKFKPVAAWISY 404

Query: 156 ---SPTHSG------LKRLGSLTFYLRFLCCFGQESRVLHTVSHIERIQCILAQSDLALL 208
              +   SG       +RL S  F  +  C F +ESRVLHT  +IE  + ILA    ALL
Sbjct: 405 FLRAIMASGESQKFPTQRLRSPLFLGQLYCSFRRESRVLHTSFNIEGTRHILAWIGFALL 462

[Close]
BLAST of CsaV3_7G011620 vs. TrEMBL
Match: tr|A0A0A0K3X3|A0A0A0K3X3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279770 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.6e-10
Identity = 72/213 (33.80%), Postives = 91/213 (42.72%), Query Frame = 0 

Query: 41  AKVESSPRSSESKEPKASYPKRLGSLTLYRILARSDLALLLFTGDY---GFGRELRVPYE 100
           ++VESSPRSS  +  ++             ILARS LALL FTGD+       ++R P  
Sbjct: 5   SRVESSPRSSNIQRTQS-------------ILARSSLALLPFTGDFNQASSAMQVRGP-- 64

Query: 101 NFDNNGTRCILARSGLALLISRGEF-------IVASVESREFNTQDLTLKEPNTFLLEVA 160
                 T  I+A+S L LL+S   +       IVA  ESREFNTQDLTLKEP+ F  +VA
Sbjct: 65  ----KRTLHIMAQSDLVLLLSTTGYAFGESVCIVALAESREFNTQDLTLKEPDAFFTKVA 124

Query: 161 WSPTHSGLKRLGSLTFYLRFLCCF-----------------------------------G 209
           W            L+++LR                                         
Sbjct: 125 W------------LSYFLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSESRD 184

[Close]
BLAST of CsaV3_7G011620 vs. TrEMBL
Match: tr|A0A0A0K7T2|A0A0A0K7T2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279790 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.3e-09
Identity = 48/151 (31.79%), Postives = 71/151 (47.02%), Query Frame = 0 

Query: 88  FGRELRVPYENFDNNGTRCILARSGLALLISRGEFIVASVESREFNTQDLTLKEPNTFLL 147
           + +E+RVP+   D    + IL ++     + +    ++ +ES+EF  Q LTLKEPN F L
Sbjct: 14  YSQEMRVPHAVSDTKEIQRILPKATSLSCVLQTTMALSEIESQEFPAQALTLKEPNAFFL 73

Query: 148 -------------EVAWSPTHSGLKRLGSLTFYLRFLCCFGQES------------RVLH 207
                          AW+ +    +           LC   + S            RV H
Sbjct: 74  RSGLALLLSSGDGHEAWAKS----REFPMQILIFGTLCILARSSLARLRSTGNGHLRVPH 133

Query: 208 TVSHIERIQCILAQSDLALLLSKGDYGFRRE 214
            +S+ E I+ ILA++DL LLLS GDYGF+RE
Sbjct: 134 AISNNEGIRHILARNDLILLLSIGDYGFKRE 160

[Close]
BLAST of CsaV3_7G011620 vs. TrEMBL
Match: tr|A0A0A0K9A9|A0A0A0K9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279830 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.5e-09
Identity = 59/138 (42.75%), Postives = 71/138 (51.45%), Query Frame = 0 

Query: 24  ESRLALLLSTGDCYVASAKVESSPRSSESKEPKASYPKRLG-SLTLYRILARSD------ 83
           +S LALLLST D YVASAK    P   +   PK   P     S  L  I+A  +      
Sbjct: 78  QSGLALLLSTSDFYVASAKSREFP--MQFLIPKKFKPVAAWISYFLRAIMASGESQKFPT 137

Query: 84  --LALLLFTGDY--GFGRELRVPYENFDNNGTRCILARSGLALLISRGEFIVASVESREF 143
             L   LF G     F RE RV + +F+  GTR ILA  G ALL+S  +F VAS +S E 
Sbjct: 138 QRLRSPLFLGQLYCSFRRESRVLHTSFNIEGTRHILAWIGFALLLSTSDFYVASAKSPEL 197

Query: 144 NTQDLTLKEPNTFLLEVA 151
           +T  L  KEP+ FL E A
Sbjct: 198 HTHFLIPKEPDAFLPEAA 213

The following BLAST results are available for this feature:
BLAST of CsaV3_7G011620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44050.17.9e-124100.00hypothetical protein Csa_7G140940 [Cucumis sativus][more]
KGN44403.14.6e-1540.54hypothetical protein Csa_7G279850 [Cucumis sativus][more]
KGN44395.11.0e-0933.80hypothetical protein Csa_7G279770 [Cucumis sativus][more]
KGN44397.11.1e-0831.79hypothetical protein Csa_7G279790 [Cucumis sativus][more]
KGN44401.11.4e-0842.75hypothetical protein Csa_7G279830 [Cucumis sativus][more]
BLAST of CsaV3_7G011620 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K328|A0A0A0K328_CUCSA5.2e-124100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G140940 PE=4 SV=1[more]
tr|A0A0A0K4J2|A0A0A0K4J2_CUCSA3.1e-1540.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279850 PE=4 SV=1[more]
tr|A0A0A0K3X3|A0A0A0K3X3_CUCSA6.6e-1033.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279770 PE=4 SV=1[more]
tr|A0A0A0K7T2|A0A0A0K7T2_CUCSA7.3e-0931.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279790 PE=4 SV=1[more]
tr|A0A0A0K9A9|A0A0A0K9A9_CUCSA9.5e-0942.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G279830 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011620.1CsaV3_7G011620.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G011620Melon (DHL92) v3.5.1cucmeB544