CsaV3_7G011590 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G011590
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 6429399 .. 6430059 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGGGTATGTTTTGGTGAGTATTTATGGTTTTCTTGGAATTTTTTTATAGCAATAAGCTTGTAACTTAAATTAGTTGATAACCATCATATTTAGGTGATAAATTTGAGTTGTTCGAAAGATTATATTATTGTCCAGCCAACAAGATGTGGAATTTAGGCGTCTTGAGCACATTTTGGGCGAGAATCCAAGCATTTTGAGTTAGTTTTGAGTACCTTTTGAGTTTTTGTACTAATTTTGATGAACTCATGATATTGGATGGTGGATTTTGATTTTAAGAAGTGATTAGGGTGCTGTTCATTGAAGTTGAGGTTATTTTTCCATTCGATAACTCACACCGCCGCAAGGTTATGTTTGGGAGGTTTGTTCTTCTTTCTCAAAACTCATTTCTTTTTGCAATATATAAATATATTTGTTCTCTGTTCATTTTCTCTATGCAGATGACATTAGAACGCATAGTAAAGGACTCTGTCGTTCATGCTATCAAGGTGATTTTACAAACTATCCAAACTTTGGAAAACATTCGAGAGTTTTGCTATGCTATGGATTTGATTATAGGTTAGGATTTAATTATACCAAGTATGAAATATCCCAATTGGGAGATGAACCGTATGATGTAGATGAAGAAGAATTGATTTCTAATTGTATGACTTTATAA

mRNA sequence

ATGTTGTGGGTATGTTTTGATGACATTAGAACGCATAGTAAAGGACTCTGTCGTTCATGCTATCAAGGTGATTTTACAAACTATCCAAACTTTGGAAAACATTCGAGAGTTTTGCTATGCTATGGATTTGATTATAGGTTAGGATTTAATTATACCAAGTATGAAATATCCCAATTGGGAGATGAACCGTATGATGTAGATGAAGAAGAATTGATTTCTAATTGTATGACTTTATAA

Coding sequence (CDS)

ATGTTGTGGGTATGTTTTGATGACATTAGAACGCATAGTAAAGGACTCTGTCGTTCATGCTATCAAGGTGATTTTACAAACTATCCAAACTTTGGAAAACATTCGAGAGTTTTGCTATGCTATGGATTTGATTATAGGTTAGGATTTAATTATACCAAGTATGAAATATCCCAATTGGGAGATGAACCGTATGATGTAGATGAAGAAGAATTGATTTCTAATTGTATGACTTTATAA

Protein sequence

MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLGDEPYDVDEEELISNCMTL
Homology
[Close]
BLAST of CsaV3_7G011590 vs. NCBI nr
Match: KGN44048.1 (hypothetical protein Csa_7G135930 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG 60
          MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG
Sbjct: 1  MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG 60

Query: 61 DEPYDVDEEELISNCMTL 79
          DEPYDVDEEELISNCMTL
Sbjct: 61 DEPYDVDEEELISNCMTL 78

[Close]
BLAST of CsaV3_7G011590 vs. TrEMBL
Match: tr|A0A0A0K3I1|A0A0A0K3I1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G135930 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG 60
          MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG
Sbjct: 1  MLWVCFDDIRTHSKGLCRSCYQGDFTNYPNFGKHSRVLLCYGFDYRLGFNYTKYEISQLG 60

Query: 61 DEPYDVDEEELISNCMTL 79
          DEPYDVDEEELISNCMTL
Sbjct: 61 DEPYDVDEEELISNCMTL 78

The following BLAST results are available for this feature:
BLAST of CsaV3_7G011590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44048.11.7e-41100.00hypothetical protein Csa_7G135930 [Cucumis sativus][more]
BLAST of CsaV3_7G011590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G011590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K3I1|A0A0A0K3I1_CUCSA1.1e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G135930 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011590.1CsaV3_7G011590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G011590CsGy7G007970Cucumber (Gy14) v2cgybcucB348
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G011590Wild cucumber (PI 183967)cpicucB415
CsaV3_7G011590Melon (DHL92) v3.5.1cucmeB544