CsaV3_7G011520 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G011520
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 6361275 .. 6361608 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTCGTGAGTCCATTAAGTGATCTTAGCCCAGATAGGCCTAAGATCCCTCGAGAACTGCTCTTTTCTCGACTGAACAAGCACCAAGATTCCTAATATTTCCCTTTTTTGCTTCCAGTCCCAACCTAGCAAGACCCTCGGGATTGCCCGAGCTCCTAACTTCTTAAGCTTTTGTCCTTCATCTCAATCGAACAAGCATCATGATGGCCCCAAGATTTCACTTCTGTTTTCAATCTTGCTCGACATTCCACACGACTGTCTGAGATCCTTACATAAAAGGCATTGTGTCTTTCACCTTGACCGAGCAAGCATCAAGATGCTCTTGCCTTAG

mRNA sequence

ATGTCTGTCTCCCAACCTAGCAAGACCCTCGGGATTGCCCGAGCTCCTAACTTCTTAAGCTTTTGTCCTTCATCTCAATCGAACAAGCATCATGATGGCCCCAAGATTTCACTTCTGTTTTCAATCTTGCTCGACATTCCACACGACTGTCTGAGATCCTTACATAAAAGGCATTGTGTCTTTCACCTTGACCGAGCAAGCATCAAGATGCTCTTGCCTTAG

Coding sequence (CDS)

ATGTCTGTCTCCCAACCTAGCAAGACCCTCGGGATTGCCCGAGCTCCTAACTTCTTAAGCTTTTGTCCTTCATCTCAATCGAACAAGCATCATGATGGCCCCAAGATTTCACTTCTGTTTTCAATCTTGCTCGACATTCCACACGACTGTCTGAGATCCTTACATAAAAGGCATTGTGTCTTTCACCTTGACCGAGCAAGCATCAAGATGCTCTTGCCTTAG

Protein sequence

MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCVFHLDRASIKMLLP
BLAST of CsaV3_7G011520 vs. NCBI nr
Match: KGN44042.1 (hypothetical protein Csa_7G132900 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV 60
          MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV
Sbjct: 1  MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV 60

Query: 61 FHLDRASIKMLLP 74
          FHLDRASIKMLLP
Sbjct: 61 FHLDRASIKMLLP 73

BLAST of CsaV3_7G011520 vs. TrEMBL
Match: tr|A0A0A0K6Y9|A0A0A0K6Y9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G132900 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 1  MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV 60
          MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV
Sbjct: 1  MSVSQPSKTLGIARAPNFLSFCPSSQSNKHHDGPKISLLFSILLDIPHDCLRSLHKRHCV 60

Query: 61 FHLDRASIKMLLP 74
          FHLDRASIKMLLP
Sbjct: 61 FHLDRASIKMLLP 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN44042.18.5e-35100.00hypothetical protein Csa_7G132900 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K6Y9|A0A0A0K6Y9_CUCSA5.6e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G132900 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011520.1CsaV3_7G011520.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None