CsaV3_7G011390 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G011390
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 6168102 .. 6173121 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTGTCTCCAGCCATTCCACCACAGCATCGGCGTCGCGCCGATTAGTCGCAGCCTCGGCATCGCAGGTGTCCATTTCCGCTCCGATCCGTCTCCATCCGCGAAGCACCAGTCTTCCTCTGTCGTTCCAAGCCGCACGCGACTACGCCGCTCCGATCTGTCTCCAATCTACGCCGCTCCGATCTGTCTCCATCCGCGAAGCACCAGTCTTCCTCTGTCGTTCCAAGCCGCACGCGACTTCTCTTCCAGCCGTGAGTGCAAGACGACGTCTACCGTCCGACGCCGCCCACCAGATCTGACGAATCCTTCAGCCGTTTGTCTTCAGATCTGACGAATCTTTCAGCCGTTTGTCTTCAAGTTTTTTTTGTCTCCGTTCCCAGCCGTGCACCCCTGAATCCAGTCGCCGCAACCCAGCCGTGCACCCCTGAATCCAGTCGCCGCAACCCAGCCGTGAACCCCTGAATCCAGTCGCCGCGACCCAGCTGTGAAGACGCTCACCTGCCACGAATCCCAGTCTTGCAAAGCAAATCTCAGCCGCCAAATACAGTGAAACCCAGATCTGACGAATCCAGTCACGAATCAGTCAAAACTCGGTCGAAAATCCGCATTGTTAACCCCAAATCAAAATGGAGAGAGACCATATCTTTAGACCCATTTCTACCATACTTGATGGTACAAATTATATCACATGGGCAAATCAAATGAAAAGTTTTCTTATTGGAAGAAAACTATGGCGCATTGTAACTGGCGACATCACCAAACCAACTGCAAAGGAAGGGGATAACACATTCATTGAACGTCTCGAAGATTGGGACAGTAAAAATCATCAAATTATCACCTGGCTTGGTAACACCTCTATTCCCGCTATACATGCACAGTTTGATGCCTTTGATGATGCTAAAATATTATGGGATTTTTTGTCTACACGCTTCAAGTCTATTGGTTTAGCCCATTATTACCAACTGCACAGTACACTTGTAAATCTAAATCAAGATTCTGGTCAGTCTGTTAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAACTTGACCAAGCGAACATCAGCAAAGATCATCTTCGCCTTATTAAAGTCCTTATGGGATTACGTCCAGAATATGAATCTGTTAGAGCTGCTTTACTACACCGGAATCCCTTACCCTCATTAGATGCAGCTATTCAAGAAATTCTGTTTGAAGAAAAGCGTCTTGGCATCAACTCTACTAAACAATCTGATGTTGTCCTTGCTAGCACATACACTCCCAACAGAGCCGCAAATATGTTTTGTAAGAATTGTAAGCTCTCTGGTCACAAATTTAGTAACTGTCCTAAAATAGAGTGCAGGTACTGCCATAAACATGGCCACATTCTGGATAACTGCCCTACCAGACCACCCCGACCTCCTAGCACTTCCACAAAAGAGAAAATTTTTACCAAACATGGTTCCTCATCTGTTGTTGCTGCGACCTCGGATGATTCATCCCTCATTCAGATAAGTGATCTTCAGAGCTTATTGAATCAACTAATTTCATCATCCTCCGCTCTTGCTGTTTCATCAGGTAATCGATGGCTTCTTGATTCTGCCTGTTGTAATCATATGACCTCTGACTCTTCTCTTATGTCTACTTCTAGCCCTACAAAATCTTTACCTCCTATTTATGCTGCTGATGGTAATTGTATGAACATCTCTCATACTGGTACCATTGATACTCCCAGTTTACATCTTCCCCATACTTACTGTGTTCCTAACCTGACCTTTAATCTAGTGTCTGTTGGTCAATTATGTGATCTTGGCTTAAATGTTTCATTTTCTCCCAATGGTTGTCAGGTTCAGGATCCGCAGACGGGACAGACGATTGGAACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCACATCACTTCGGGTTTCATCTCCTTCTTCCATCTCTGCTTCGGTCACTGATTCTGACACATATCAGTGGCATCTTCGTCTTGGTCATGCTTCCTCTGAAAAACTTCGTCATTTAATTTCTGTTAACAATTTGACTAATCTTACTAAATTTGTTCCTTTTAATTGTTTGAATTGCAAACTTGCTAAACAACCTGCCTTATCTTTTTCTCAATCCATCTCTAATTGTGATAAACCTTTTGATTTAGTGCATTCTGATATTTGGGGTCCTGCCCCAATTACTACTGTTCATGGTTATCGCTACTATGTTTTATTCATTGATGACTACTCTCGATTTACATGGATTTACTTTCTAAAACATCGTTCTGAATTATCTCGCACATATATTGAGTTTGCTAACATGATTCGCACTCAATTTTCCTCTCCCATCAAAATTCTTCGCACTGATAATGCTTTGGAATATAAAGATTCCATCCTTCTTTCTTTTCTTTCCCAACAGGGCACTATTGTTCAGCGCTCTTGCCCTCATACCTCTCAACAAAATGGACGTGCTGAGCGCAAACATCGTCACATTCTTGACTCAGTACGTGCCCTCCTTCTTTCTGCCTCTTGTCCAGAAAAATTCTGGGGTGAAGCTGCCCTTACATCAGTATATACAATCAATCGTCTCCCTTCCTCTGTCCTTCAAAACACCTCTCCGTTCGAAAAACTATATGGTATTTCTCCCGACTATTCTAAACTCAAAGTTTTTGGTAGTGCCTGCTTCGTTCTGTTACATCCTCATGAACACAATAAACTTGAACCACGTGCCCGTCTCTGTTGCTTCCTTGGCTATGGCACCGAACACAAAGGATTTCGTTGTTGGGACCCTCTTTCCAACCGACTCCGGATATCTCGGCATGTCACTTTTTGGGAACACACTATGTTCTCTCGTTTGTCCTCCTTCCACACCTCTTTCTCTAGTCCTCAATCTTTCTTTACAAATACATCTGTTGACCTTTTTCCTCTCTCTGAACCCACCTTGGATACTGAGCTTGCACAATCTTCACCTGCTACTGCAAATCCGGATCCACCGTCTGTCTCCGATGATGTTCCTGAATCGCCACCTGCTACTCCTCTTCGTCGCTCTACCCGGGTAAGAGAACCTCCCAGTCATCTCACTGATTACCATTGTTTTTCTACCATTGTTTCCCTTGTTGAACCCACCTCTTATCAAGAGGCCAGTACTAACCCAGTATGGCAGAAAGCAATGGATGAAGAATTACAGGCTCTTGAAAAGACGCACACTTGGGACTATGTTGATTTACCTCCCGGTAAAAGACCCATTGGTTGCAAATGGATTTACAAAATCAAAACTCACTCTGATGGAACTATTGAACGTTATAAAGCTCGGCTTGTTGCAAAAGGATACTCACAAGAATATGGGATTGACTATGAAGAAACATTTGCCCCTGTTGCCCGGATGACATCTGTTCGCAGCTTGTTAGCTGTTGCTGCTGCCAAACAGTGGCCTCTTCTTCAGATGGATGTCAAAAATGCATTTCTTAACGGCAACCTATCTGAAGAAGTGTATATGAAGCCACCTCAGGGAACTTCTCCTCCTCCCAACAAGGTGTGTCTCCTTCGTCGCGCTCTCTATACGGTCTAAAACAGGCTCCACGAGCTTGGTTTGCCACGTTTAGCTCCACCATTACTCAACTTGGATTTACCTCCAGCTCTCACGACAATGCCCTTTTTACACGACAGACAACTCATGGTATTGTTCTTCTTCTTCTTTATGTTGATGATATGATTATTACTGGTAATGATCAACAGGCCATATCCGACCTACAACAATATCTTGGTCAACATTTTGAGATGAAAGACCTTGGATCTCTCAATTACTTTCTCGGTCTTGAAGTCTCTCACCGTTCAGATGGTTATCTGTTATCTCAAGCGAAATATGCATCTGATCTAATAGCGCGATCAGGAATTACAGACTCCACCACATCTTCAACACCGTTAGATCCTCATGTCCACCTAACTCCGTTTGATGGTGTTCCTCTTGACGATGCAAGCTTGTATCGGCAACTTGTTGGCAGTCTTATATACCTAACAGTAACTCGCCCAGATATTATATGCATATGCTGTTCATATTGTCAGTCAATTTATGGCTGCTCCTCGAACAATTCATTTCACTGCTGTTCTACGCATACTTCGCTATGTCAAAGGCACCTTGGGACATGGTCTTCAATTCTCATCTCAGTCTTCCCTTGTGTTGTCGGGATATTCTGATGCTGATTGGGCGGGGGATCCTACTGATCGACGATCCACTACAGGATACATTTTTTACTTAGGTGATTCTCTCATCTCATGGCGTAGTAAGAAACAAAGTGTTATATCTCGTTCCAGTACGGAATCTGAATATCGTGCTCTGGCTGATGCTACAGCTGAACTTATATGGCTTCGGTGGCTCCTTGCCGATATGGGTGTCCCTCAACAGGGTCCTACCCTCCTCCATTGTGACAATCGTAGTGCCATTCAGATTGCTCACAATGATGTGTTTCATGAACGTACAAAACACATTGAAAATGACTGTCACTTTGTTCGTCACCACCTCCTAAGCAACACCCTCCTCTTACGTTCTGTTTCTACTATTGAACAACCTGCGGATATCTTCACCAAAGCCTTGCCATCTAATCGATTCTGTCACTTACTTACCAAACTCAAGTTGATCGCTACTCTACCACCTTGAGTTTGAGGGAGGGTATTAATGTAAATTCTGTAAATGCAATTTATGCATAATTTTCCTAATACTCTTGTATAAATACACTACTTTGATCAATAAACAAAGTGAGGGAATATTCTTCAGCATATCCTTCCATATATATATATATATATATATTCATACTTATTTATCAAAAATAAAAATATAAGGGAATATTTTCTCGTGGGCAATGCGGGTTTTCGTAGAGAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

mRNA sequence

CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

Coding sequence (CDS)

CTGTCTCCAGCCATTCCACCACAGCATCGACGTGGCACGCCTCGCAGACAGCTCCGATCTAATCCTTGTCCGGTTGCTCTTGGAGAAATTTGTGAGAATGGAAATGTGGTATGGGATAAGAGGGTGGGGACGGGAAAGGAGAGTGGCATCTTCGTTCCACTACCCCGCTCTGCTCGGTGA

Protein sequence

LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR
BLAST of CsaV3_7G011390 vs. NCBI nr
Match: KGN44032.1 (hypothetical protein Csa_7G115350 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-27
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 60
          +SPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR
Sbjct: 1  MSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 59

BLAST of CsaV3_7G011390 vs. TrEMBL
Match: tr|A0A0A0K6Y2|A0A0A0K6Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G115350 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-27
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0

Query: 1  LSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 60
          +SPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR
Sbjct: 1  MSPAIPPQHRRGTPRRQLRSNPCPVALGEICENGNVVWDKRVGTGKESGIFVPLPRSAR 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN44032.13.1e-2798.31hypothetical protein Csa_7G115350 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K6Y2|A0A0A0K6Y2_CUCSA2.1e-2798.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G115350 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G011390.1CsaV3_7G011390.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None