CsaV3_7G010190 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G010190
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	plastid division protein PDV2
Location	chr7 : 5770911 .. 5773802 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAACAAAGCACCGCTATAATCTTAGCTAGAGCCACGGAGTTGAGGCTAAAGATTAGAAGCTCTGTTAACACAACCACCACCACCACTTCCGCGGTTACTTCCCGGGATGATCGCTTTTCTGTGGATGAAAATAATGGCGTTGTTGGTTCGCGCCGGAGTGAGGCTGATGCGAGCGGAGAGGCGGAGGAAGATGAGGAAGCGGTGAGGCTTTTGAATATCTGCGATGCACTTGAATCTCTCGAGAATCAGCTCTCTTCATTGCAGGTTTGATTATTGTTGCTTTTCTTGTTTTCTTGTTTTCTGAATGAAGATTATGCTTCGATTTGGTTTGGTTTCCTTTCGCATTTTTGTTATTGCGTCGATAATGTTGAGAATTTCTGTGGCTTGTTTGATTGATATAGACCTGCTTGATTCTGTTGGTTAATAATTATGTTTGGACTCTCAATCCTATAGAAGAATCCATGATATGCAGTTAGTCTATTATTTTTGTAGCATGTGAAGAGAAAAAGTATACTTTGAGGTACGATTTCGATGTCCATGATAGTCACATATTTAGAACTTAAAATCTTACAAGTTTTCTGACAACCAAATGTAGTTTGGTTTAATACTTGATTGCTCAAAGATAACCTCGGCCAAGTAGTCAGAATATAAAATTTGTTTTGAAACAGTTTAAGGGTATGCAATTACAATTCTACTCACAATATAAAATTTGATTTAATATTTGGTATGATTTTTCCCAAAAAACTAGGAATCATCATACCATCTTTTTAGATATGGAACTATTTTTCTTTTATTTGAAATGTTCCTAAACATATGCTATAGTCTGAAAGCTTGTGTTTCTATCGTCGGTGCCTCGTCACGCTCACTGCCATTCTGTGGTAGTAGAGCAAAAATATGAACGGGGACTGGGGAGCATGATCTCCCTCAATTCAAACATCTTATTTTATATATTTACAAAAATTAGTATTGGACAGTTGTATGGTGTTAGACCACCGGTTATACACACTTCTACTCGGAGGAGCAAAAATGAGAATTCACTGTCTGGTTAATGTTTGACTTCAGTTTATGTGTTCTTTTATTATTTTGTGTGAGGTGGTGTGGGGTCATATATATATGTACGTGTAGGGTATTATTTTGGGCATCTTAAAAGTGAATGTTTGTGTAAACTTGGAGAGTACTGCCCTCTCGGAAGGTGGAGTTGTAATATTTCTGATTATCAATATCAAACCAGTGCTTTCTATATTTGTGTATTTGGTGATTCTTAAATATGGCTGATGGTTTTAGTGCTTCAGGATATGTGTAGGGTTGACGAAACTTAAAACCTTCAATGCCCCACTTCACTGGCATGTTTATTGATATTGCTTTTTCTAGTTTCAATGAGTATGTATCAGTTGTTTACCAAACTGTTATTCGTTCTGGTGTGCTATGCACTTATCCCCGTGGCTCTGTTAGCTTGTTTGACTGTTGGTGGATTTCTCCTGCTCATTGATTCTTGTTATGGTGTGAATCATCCAAAGATGGTGGATTTCATCTTTTTTCTCTTTGAGTTGTGTTAATTTAGTTCGCAAGTGTATCCAATTCTCAGGATCCTGGTCCTTTACTGACAATTAAATCTGGTATAAATTTTTAACTTATAGGTGAGTTTGTCCATGCATAGATATTGAAAAGATTCTATATATTAATATTCTAAAAAGGACAAGGAGAGTGAGGATAGGTTTCCCTCCATCAAAGAACCTATGGGAACCAATAGGAAAGATCCCCAATTGGTTGCACGGAAGGGATAAAATTATAAAAAAGAAGAGGAAAATAGTAATTTATAAAATTAACTTGAGATCTCCATTTGTGAGCTAAAATAATGTACTTATGAATGTTAAAATCTGTTTATGCTGATTTTAAAAGTTCTTTAATTAATGATAGGAATCACTTCTTGTCTTATACATCCATCAATCGTGATTCTTGGCTAAAAGATGTTAAATTTCAATTAAAACACCTACAAAAGAAGCTGCTAAATTATTTCTTAATTTTGACTTTTCATGCCGTATCTTCCTTCATTTTGTAGTTTTTGAAGCCATTTTCAACATGAATCTGAAATTCGACAACAATGATGTTTGTATGTCCAATATAATGGACCTTGAGAGAGAGGCTAGTTACCGTGTTGGTGCAACAACGTTTCATTTGTAGCATAATTTAGATGGAATATTGTTCCATAGAACATCCTTCTAATACTTCTTTCTATCTTCTAATTTGCAGGATTTACAACAACGGCAAAGGTATGAGAAAGAAGTAGCCCTTTCCGAAATCGAACATAGCCGCAAGATTTTACTAGATAAACTGAAGAAATACAAAGGAGGGGACTTGGAAGTGATACATGAGACTTCAGCTTTTGTTGGTGAGACAGTGCAGCACAACCAAGATCTCATGCTTCCTCCATATCCAACCCATCTTGGTAATGGCTACTTATATCCCATCCCTTCTGGACACAAGTCTGTGAGTAATGGGCTAATTGACGCCACGGCAAATAAAGCTACAAATGAACTTAATGAATCAGAAAGGAAACAACCGAAATCAGATTCCTGGAAGTCGAAGAATGGAATGGGATCTTTCATTAGGGTAGCTGCAAAATCAGTTGTTACTATTGTTGGCATAGTATCCATACTCCACTTGACTGGCTTTAGACCCAAGTTTGCAAAGAAAGTTGCTGCTTTGAAGGTTTTTGACATTTTTCGAAGGTCTGCAAGTGAAAATAACGGATTGCACAATGAATGTCCTCCTGGTAAATTCCTTGTGATGGAAGATGGGGAAGCTCGATGCGTAGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGTCGTGGCTAAACCAGATGTAAACTATGGAAGCGGGTAA

mRNA sequence

ATGGAACAACAAAGCACCGCTATAATCTTAGCTAGAGCCACGGAGTTGAGGCTAAAGATTAGAAGCTCTGTTAACACAACCACCACCACCACTTCCGCGGTTACTTCCCGGGATGATCGCTTTTCTGTGGATGAAAATAATGGCGTTGTTGGTTCGCGCCGGAGTGAGGCTGATGCGAGCGGAGAGGCGGAGGAAGATGAGGAAGCGGTGAGGCTTTTGAATATCTGCGATGCACTTGAATCTCTCGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTATGAGAAAGAAGTAGCCCTTTCCGAAATCGAACATAGCCGCAAGATTTTACTAGATAAACTGAAGAAATACAAAGGAGGGGACTTGGAAGTGATACATGAGACTTCAGCTTTTGTTGGTGAGACAGTGCAGCACAACCAAGATCTCATGCTTCCTCCATATCCAACCCATCTTGGTAATGGCTACTTATATCCCATCCCTTCTGGACACAAGTCTGTGAGTAATGGGCTAATTGACGCCACGGCAAATAAAGCTACAAATGAACTTAATGAATCAGAAAGGAAACAACCGAAATCAGATTCCTGGAAGTCGAAGAATGGAATGGGATCTTTCATTAGGGTAGCTGCAAAATCAGTTGTTACTATTGTTGGCATAGTATCCATACTCCACTTGACTGGCTTTAGACCCAAGTTTGCAAAGAAAGTTGCTGCTTTGAAGGTTTTTGACATTTTTCGAAGGTCTGCAAGTGAAAATAACGGATTGCACAATGAATGTCCTCCTGGTAAATTCCTTGTGATGGAAGATGGGGAAGCTCGATGCGTAGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGTCGTGGCTAAACCAGATGTAAACTATGGAAGCGGGTAA

Coding sequence (CDS)

ATGGAACAACAAAGCACCGCTATAATCTTAGCTAGAGCCACGGAGTTGAGGCTAAAGATTAGAAGCTCTGTTAACACAACCACCACCACCACTTCCGCGGTTACTTCCCGGGATGATCGCTTTTCTGTGGATGAAAATAATGGCGTTGTTGGTTCGCGCCGGAGTGAGGCTGATGCGAGCGGAGAGGCGGAGGAAGATGAGGAAGCGGTGAGGCTTTTGAATATCTGCGATGCACTTGAATCTCTCGAGAATCAGCTCTCTTCATTGCAGGATTTACAACAACGGCAAAGGTATGAGAAAGAAGTAGCCCTTTCCGAAATCGAACATAGCCGCAAGATTTTACTAGATAAACTGAAGAAATACAAAGGAGGGGACTTGGAAGTGATACATGAGACTTCAGCTTTTGTTGGTGAGACAGTGCAGCACAACCAAGATCTCATGCTTCCTCCATATCCAACCCATCTTGGTAATGGCTACTTATATCCCATCCCTTCTGGACACAAGTCTGTGAGTAATGGGCTAATTGACGCCACGGCAAATAAAGCTACAAATGAACTTAATGAATCAGAAAGGAAACAACCGAAATCAGATTCCTGGAAGTCGAAGAATGGAATGGGATCTTTCATTAGGGTAGCTGCAAAATCAGTTGTTACTATTGTTGGCATAGTATCCATACTCCACTTGACTGGCTTTAGACCCAAGTTTGCAAAGAAAGTTGCTGCTTTGAAGGTTTTTGACATTTTTCGAAGGTCTGCAAGTGAAAATAACGGATTGCACAATGAATGTCCTCCTGGTAAATTCCTTGTGATGGAAGATGGGGAAGCTCGATGCGTAGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCAGTCGTGGCTAAACCAGATGTAAACTATGGAAGCGGGTAA

Protein sequence

MEQQSTAIILARATELRLKIRSSVNTTTTTTSAVTSRDDRFSVDENNGVVGSRRSEADASGEAEEDEEAVRLLNICDALESLENQLSSLQDLQQRQRYEKEVALSEIEHSRKILLDKLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGSG

Homology

[Close]

BLAST of CsaV3_7G010190 vs. NCBI nr
Match: XP_004137006.1 (PREDICTED: plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypothetical protein Csa_7G075620 [Cucumis sativus])

HSP 1 Score: 485.3 bits (1248), Expect = 1.5e-133
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS 60
           MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS
Sbjct: 1   MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS 60

Query: 61  GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK 120
           GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK
Sbjct: 61  GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK 120

Query: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180
           YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN
Sbjct: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180

Query: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240
           KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA
Sbjct: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240

Query: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300
           ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS
Sbjct: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300

Query: 301 G 302
           G
Sbjct: 301 G 301

[Close]

BLAST of CsaV3_7G010190 vs. NCBI nr
Match: XP_016901679.1 (PREDICTED: plastid division protein PDV2 [Cucumis melo])

HSP 1 Score: 369.0 bits (946), Expect = 1.5e-98
Identity = 249/305 (81.64%), Postives = 256/305 (83.93%), Query Frame = 0


Query: 1   MEQQSTAIILARATELR----LKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSE 60
           MEQQ+TAIILARATELR           XXXXXXXXXXXSRDDRFSVDEN+GVVGSRRSE
Sbjct: 1   MEQQNTAIILARATELRXXXXXXXXXXXXXXXXXXXXXXSRDDRFSVDENSGVVGSRRSE 60

Query: 61  ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLD 120
           ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSR+ILLD
Sbjct: 61  ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSREILLD 120

Query: 121 KLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLID 180
           KLKKYKGGDLEVIHE SAF GETVQH QDLMLPPYPTH GNGYLYP PSGHKSVSNGLID
Sbjct: 121 KLKKYKGGDLEVIHEASAFAGETVQHKQDLMLPPYPTHFGNGYLYPFPSGHKSVSNGLID 180

Query: 181 ATANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFA 240
           AT NKATNEL+ESERKQ                               ILHLTGFRPKFA
Sbjct: 181 ATENKATNELDESERKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILHLTGFRPKFA 240

Query: 241 KKVAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDV 300
           KKVAALKVFDIFRRSASENNG ++ECPPGKFLVME+GEARCVVKERIEVPFSSVVAKPDV
Sbjct: 241 KKVAALKVFDIFRRSASENNGSYDECPPGKFLVMEEGEARCVVKERIEVPFSSVVAKPDV 300

Query: 301 NYGSG 302
           NYGSG
Sbjct: 301 NYGSG 305

[Close]

BLAST of CsaV3_7G010190 vs. NCBI nr
Match: XP_023511492.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 1.6e-92
Identity = 211/303 (69.64%), Postives = 228/303 (75.25%), Query Frame = 0


Query: 1   MEQQSTAIILARATELRLKIRSSV--XXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEAD 60
           ME+QSTAIILARATELRLKIRSSV             +RDDR +VDENNG VGSRRSEAD
Sbjct: 1   MEEQSTAIILARATELRLKIRSSVNTTTTSSAVTSWENRDDRLAVDENNG-VGSRRSEAD 60

Query: 61  ASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKL 120
           A                      XXXXXXXXXXXX    YEKEVALSEIEHSR++LLDKL
Sbjct: 61  AIEVTEEDEEAVRLLNICGALESXXXXXXXXXXXXQRQRYEKEVALSEIEHSREMLLDKL 120

Query: 121 KKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDAT 180
           KKY+G DLEVIHE SAFVGETVQHNQ LMLPPYP+H GNGYL+P PS  K VS     A 
Sbjct: 121 KKYEGEDLEVIHEASAFVGETVQHNQYLMLPPYPSHPGNGYLHPFPSALKFVS-----AA 180

Query: 181 ANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKK 240
            NKAT ELNESERK  K DS  S+  +GSFI +AAKSVVTIVGIVSILHL GFRPKFA K
Sbjct: 181 TNKATKELNESERKHSKLDSTNSRYRLGSFISIAAKSVVTIVGIVSILHLAGFRPKFASK 240

Query: 241 VAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNY 300
           +AALK  D F+RSA+ NN   + CPPGKFLVME+G+ARCVVKERIEVPFSSVVAKPDVNY
Sbjct: 241 IAALKALDRFQRSAAVNNESRHGCPPGKFLVMENGKARCVVKERIEVPFSSVVAKPDVNY 297

Query: 301 GSG 302
           GSG
Sbjct: 301 GSG 297

[Close]

BLAST of CsaV3_7G010190 vs. NCBI nr
Match: XP_022952983.1 (plastid division protein PDV2-like [Cucurbita moschata])

HSP 1 Score: 336.7 bits (862), Expect = 8.4e-89
Identity = 225/303 (74.26%), Postives = 239/303 (78.88%), Query Frame = 0


Query: 1   MEQQSTAIILARATELRLKIRSSV--XXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEAD 60
           ME QSTAIILARATELRLKIRSSV             +RDDRF+VDENNG VGSRRSEAD
Sbjct: 1   MEVQSTAIILARATELRLKIRSSVNTTTTSSAVISLENRDDRFAVDENNG-VGSRRSEAD 60

Query: 61  ASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKL 120
           A      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YEKEVALSEIEHSR++LLDKL
Sbjct: 61  AIEVTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYEKEVALSEIEHSREMLLDKL 120

Query: 121 KKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDAT 180
           KKY+G DLEVIHE SAFVGETVQHNQDLMLPPYP+H GNGYL+P PS  K VS     A 
Sbjct: 121 KKYEGEDLEVIHEASAFVGETVQHNQDLMLPPYPSHPGNGYLHPFPSALKFVS-----AA 180

Query: 181 ANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKK 240
            NKAT ELNESERK  K DS       GSFI +AAKSVV      S+LHL GFRPKFA K
Sbjct: 181 TNKATKELNESERKHSKLDSRXXXXXXGSFISIAAKSVVXXXXXXSLLHLAGFRPKFAAK 240

Query: 241 VAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNY 300
           +AALK  D FRRSA+ NN   + CPPGKFLVME+G+ARCVVKERIEVPFSSVVAKPDVNY
Sbjct: 241 IAALKALDRFRRSAAVNNESRHGCPPGKFLVMENGKARCVVKERIEVPFSSVVAKPDVNY 297

Query: 301 GSG 302
           GSG
Sbjct: 301 GSG 297

[Close]

BLAST of CsaV3_7G010190 vs. NCBI nr
Match: XP_023530122.1 (plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 plastid division protein PDV2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 6.3e-60
Identity = 155/302 (51.32%), Postives = 174/302 (57.62%), Query Frame = 0


Query: 1   MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS 60
           ME+Q TA+ILARATELRLKIR SV            RDDRF+VDENNGV         +S
Sbjct: 1   MEEQGTAVILARATELRLKIRGSVNTTATSPETDI-RDDRFAVDENNGV--------GSS 60

Query: 61  GEA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLK 120
           GEA XXXXXXX                           YEKEVALSEIEHSRKI+LDKLK
Sbjct: 61  GEAXXXXXXXXRLLKICDALASLENQLSSLQDLQQRQRYEKEVALSEIEHSRKIVLDKLK 120

Query: 121 KYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATA 180
           KY+G DLEVIHE SAFV ETVQHN+D  LPPYP+H    Y++P PSGH+SV+NGL DAT 
Sbjct: 121 KYEGQDLEVIHEASAFVRETVQHNKDFTLPPYPSHPDKSYIHPFPSGHESVTNGLTDATT 180

Query: 181 NKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKV 240
           N  T EL ESE                                          PK A+KV
Sbjct: 181 NIGTKELTESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKLARKV 240

Query: 241 AALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYG 300
           ++LKVF+IFR SA  NNG HN CPP +         +C+VKERIEVPFSS V KPDVNYG
Sbjct: 241 SSLKVFNIFRPSAVGNNGSHNVCPPVE-------AHQCIVKERIEVPFSSAVVKPDVNYG 286

Query: 301 SG 302
            G
Sbjct: 301 RG 286

[Close]

BLAST of CsaV3_7G010190 vs. TAIR10
Match: AT2G16070.2 (plastid division2)

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-51
Identity = 121/311 (38.91%), Postives = 172/311 (55.31%), Query Frame = 0


Query: 2   EQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDE--NNGVVGSRRSEADA 61
           +++   +ILARATELRLKI   +             ++  S  E   + ++G++  + D+
Sbjct: 3   DEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFDS 62

Query: 62  -SGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKL 121
            S E                                   YEK++ALSEI++SRK+LL+KL
Sbjct: 63  ISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEKL 122

Query: 122 KKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTH----LG----NGYLYPIPSGHKSV 181
           K+YKG D EV+ ET+ F GE V +  DL+LPPYP H    LG    NGYL  +PS  KS 
Sbjct: 123 KEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKSD 182

Query: 182 SNGLIDATANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTG 241
           +NG        + +  NE+E K P   S  S +G+  F+   AK V+ I+G++S+L  +G
Sbjct: 183 ANGF------GSGHVRNEAEAKSPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSASG 242

Query: 242 FRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSV 301
           + P+  K+ A+L +F +    A+      N+CPPGK LV+EDGEARC+VKER+E+PF SV
Sbjct: 243 YGPEMRKRGASLNLFGLLPHRATRGKRTPNQCPPGKVLVIEDGEARCLVKERVEIPFDSV 302

[Close]

BLAST of CsaV3_7G010190 vs. Swiss-Prot
Match: sp|Q9XII1|PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50
Identity = 121/311 (38.91%), Postives = 172/311 (55.31%), Query Frame = 0


Query: 2   EQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDE--NNGVVGSRRSEADA 61
           +++   +ILARATELRLKI   +             ++  S  E   + ++G++  + D+
Sbjct: 3   DEEGIGLILARATELRLKISDCIDNSSTTVSDNGDGNEDLSPGEGRKSEIIGNQDKDFDS 62

Query: 62  -SGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKL 121
            S E                                   YEK++ALSEI++SRK+LL+KL
Sbjct: 63  ISSEDVDEAEAERLLRIRDALEALESQLASLQNLRQRQQYEKQLALSEIDYSRKMLLEKL 122

Query: 122 KKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTH----LG----NGYLYPIPSGHKSV 181
           K+YKG D EV+ ET+ F GE V +  DL+LPPYP H    LG    NGYL  +PS  KS 
Sbjct: 123 KEYKGKDFEVLRETTTFAGERVDYENDLLLPPYPVHPPLSLGLDNNNGYLSHLPSKKKSD 182

Query: 182 SNGLIDATANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTG 241
           +NG        + +  NE+E K P   S  S +G+  F+   AK V+ I+G++S+L  +G
Sbjct: 183 ANGF------GSGHVRNEAEAKSPNGGSGGSSHGVIRFLGSVAKIVLPIIGVISLLSASG 242

Query: 242 FRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSV 301
           + P+  K+ A+L +F +    A+      N+CPPGK LV+EDGEARC+VKER+E+PF SV
Sbjct: 243 YGPEMRKRGASLNLFGLLPHRATRGKRTPNQCPPGKVLVIEDGEARCLVKERVEIPFDSV 302

[Close]

BLAST of CsaV3_7G010190 vs. TrEMBL
Match: tr|A0A0A0K6S0|A0A0A0K6S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 9.7e-134
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS 60
           MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS
Sbjct: 1   MEQQSTAIILARATELRLKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSEADAS 60

Query: 61  GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK 120
           GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK
Sbjct: 61  GEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLDKLKK 120

Query: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180
           YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN
Sbjct: 121 YKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLIDATAN 180

Query: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240
           KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA
Sbjct: 181 KATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVA 240

Query: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300
           ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS
Sbjct: 241 ALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGS 300

Query: 301 G 302
           G
Sbjct: 301 G 301

[Close]

BLAST of CsaV3_7G010190 vs. TrEMBL
Match: tr|A0A1S4E0D9|A0A1S4E0D9_CUCME (plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.0e-98
Identity = 249/305 (81.64%), Postives = 256/305 (83.93%), Query Frame = 0


Query: 1   MEQQSTAIILARATELR----LKIRSSVXXXXXXXXXXXSRDDRFSVDENNGVVGSRRSE 60
           MEQQ+TAIILARATELR           XXXXXXXXXXXSRDDRFSVDEN+GVVGSRRSE
Sbjct: 1   MEQQNTAIILARATELRXXXXXXXXXXXXXXXXXXXXXXSRDDRFSVDENSGVVGSRRSE 60

Query: 61  ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSRKILLD 120
           ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSR+ILLD
Sbjct: 61  ADASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEKEVALSEIEHSREILLD 120

Query: 121 KLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTHLGNGYLYPIPSGHKSVSNGLID 180
           KLKKYKGGDLEVIHE SAF GETVQH QDLMLPPYPTH GNGYLYP PSGHKSVSNGLID
Sbjct: 121 KLKKYKGGDLEVIHEASAFAGETVQHKQDLMLPPYPTHFGNGYLYPFPSGHKSVSNGLID 180

Query: 181 ATANKATNELNESERKQPKSDSWKSKNGMGSFIRVAAKSVVTIVGIVSILHLTGFRPKFA 240
           AT NKATNEL+ESERKQ                               ILHLTGFRPKFA
Sbjct: 181 ATENKATNELDESERKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILHLTGFRPKFA 240

Query: 241 KKVAALKVFDIFRRSASENNGLHNECPPGKFLVMEDGEARCVVKERIEVPFSSVVAKPDV 300
           KKVAALKVFDIFRRSASENNG ++ECPPGKFLVME+GEARCVVKERIEVPFSSVVAKPDV
Sbjct: 241 KKVAALKVFDIFRRSASENNGSYDECPPGKFLVMEEGEARCVVKERIEVPFSSVVAKPDV 300

Query: 301 NYGSG 302
           NYGSG
Sbjct: 301 NYGSG 305

[Close]

BLAST of CsaV3_7G010190 vs. TrEMBL
Match: tr|A0A2I4HE20|A0A2I4HE20_9ROSI (plastid division protein PDV2-like OS=Juglans regia OX=51240 GN=LOC109016455 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.3e-57
Identity = 123/215 (57.21%), Postives = 155/215 (72.09%), Query Frame = 0


Query: 98  YEKEVALSEIEHSRKILLDKLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPT---- 157
           YE+EVAL+EIE+SRK+LLDKLK+YKG DLEVIHE SAF  ETV+HN DL LPPYP+    
Sbjct: 8   YEREVALAEIENSRKMLLDKLKEYKGKDLEVIHEASAFACETVEHNNDLQLPPYPSRPPK 67

Query: 158 ---HLGNGYLYPIPSGHKSVSNGLIDA----TANKATNELNESERKQPKSDSWKSKNGMG 217
              HL NGYL   PS  K V NG I +     A K+ +EL +S+ KQ  + S  S+ G+G
Sbjct: 68  NSLHLENGYLTQYPSTCKPVRNGTITSDPTNEAKKSISELEKSQ-KQTGTGSQGSRKGLG 127

Query: 218 SFIRVAAKSVVTIVGIVSILHLTGFRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGK 277
            FI  A+K+V+T+VG+VS+L ++GF P FAKK    KV  + R+ A++      +CPPGK
Sbjct: 128 FFISAASKTVITLVGVVSVLSMSGFGPNFAKKEDIFKVLGLSRQPAADERRSGAQCPPGK 187

Query: 278 FLVMEDGEARCVVKERIEVPFSSVVAKPDVNYGSG 302
            LV+E+GEARC+VKER+EVPFSSVVAKPDVNYG G
Sbjct: 188 VLVVENGEARCLVKERVEVPFSSVVAKPDVNYGCG 221

[Close]

BLAST of CsaV3_7G010190 vs. TrEMBL
Match: tr|B9H0L6|B9H0L6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G149900v3 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 121/210 (57.62%), Postives = 149/210 (70.95%), Query Frame = 0


Query: 98  YEKEVALSEIEHSRKILLDKLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPTH--- 157
           YEKEVALSEIEHSRKILLDKLK+Y+G DLEVI E SAF GETV+HN DL+LPPYP+    
Sbjct: 112 YEKEVALSEIEHSRKILLDKLKEYRGEDLEVIKEASAFAGETVEHNNDLLLPPYPSRHPQ 171

Query: 158 ---LGNGYLYPIPSGHKSVSNGLIDATANKATNELNESERKQPKSDSWKSKNGMGSFIRV 217
              L + YLY  PS     SNG+I   A +A   L+E E  Q ++ S  S+ G+G FI  
Sbjct: 172 SLVLNSRYLYHFPSTRN--SNGII---AGEAKRHLDEPEGNQAQTASKNSRKGLGHFISA 231

Query: 218 AAKSVVTIVGIVSILHLTGFRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGKFLVME 277
           AAK+V+T+VG++S+L L GF P   KK A LKV  +F++ A E      +CPPG+ LV+E
Sbjct: 232 AAKTVITLVGVISVLSLAGFGPSIGKKGAPLKVLGLFQQPALEERKEAVQCPPGRILVLE 291

Query: 278 DGEARCVVKERIEVPFSSVVAKPDVNYGSG 302
           DGEARCVVK R+ VPF+S+V KPDVNYGSG
Sbjct: 292 DGEARCVVKGRVAVPFNSLVGKPDVNYGSG 316

[Close]

BLAST of CsaV3_7G010190 vs. TrEMBL
Match: tr|A0A2I4GTD0|A0A2I4GTD0_9ROSI (plastid division protein PDV2-like OS=Juglans regia OX=51240 GN=LOC109010706 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.4e-55
Identity = 121/212 (57.08%), Postives = 152/212 (71.70%), Query Frame = 0


Query: 101 EVALSEIEHSRKILLDKLKKYKGGDLEVIHETSAFVGETVQHNQDLMLPPYPT------- 160
           EVAL+EIE+SRK+LLDKLK+YKG DLEVIHE SAF  ETV+HN DL LPPYP+       
Sbjct: 94  EVALAEIENSRKMLLDKLKEYKGKDLEVIHEASAFACETVEHNNDLQLPPYPSRPPKNSL 153

Query: 161 HLGNGYLYPIPSGHKSVSNGLIDA----TANKATNELNESERKQPKSDSWKSKNGMGSFI 220
           HL NGYL   PS  K V NG I +     A K+ +EL +S+ KQ  + S  S+ G+G FI
Sbjct: 154 HLENGYLTQYPSTCKPVRNGTITSDPTNEAKKSISELEKSQ-KQTGTGSQGSRKGLGFFI 213

Query: 221 RVAAKSVVTIVGIVSILHLTGFRPKFAKKVAALKVFDIFRRSASENNGLHNECPPGKFLV 280
             A+K+V+T+VG+VS+L ++GF P FAKK    KV  + R+ A++      +CPPGK LV
Sbjct: 214 SAASKTVITLVGVVSVLSMSGFGPNFAKKEDIFKVLGLSRQPAADERRSGAQCPPGKVLV 273

Query: 281 MEDGEARCVVKERIEVPFSSVVAKPDVNYGSG 302
           +E+GEARC+VKER+EVPFSSVVAKPDVNYG G
Sbjct: 274 VENGEARCLVKERVEVPFSSVVAKPDVNYGCG 304

The following BLAST results are available for this feature:

BLAST of CsaV3_7G010190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137006.1	1.5e-133	100.00	PREDICTED: plastid division protein PDV2 [Cucumis sativus] >KGN43982.1 hypotheti...	[more]
XP_016901679.1	1.5e-98	81.64	PREDICTED: plastid division protein PDV2 [Cucumis melo]	[more]
XP_023511492.1	1.6e-92	69.64	plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952983.1	8.4e-89	74.26	plastid division protein PDV2-like [Cucurbita moschata]	[more]
XP_023530122.1	6.3e-60	51.32	plastid division protein PDV2-like [Cucurbita pepo subsp. pepo] >XP_023530123.1 ...	[more]

BLAST of CsaV3_7G010190 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G16070.2	1.0e-51	38.91	plastid division2	[more]

BLAST of CsaV3_7G010190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XII1\|PDV2_ARATH	1.8e-50	38.91	Plastid division protein PDV2 OS=Arabidopsis thaliana OX=3702 GN=PDV2 PE=1 SV=1	[more]

BLAST of CsaV3_7G010190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K6S0\|A0A0A0K6S0_CUCSA	9.7e-134	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075620 PE=4 SV=1	[more]
tr\|A0A1S4E0D9\|A0A1S4E0D9_CUCME	1.0e-98	81.64	plastid division protein PDV2 OS=Cucumis melo OX=3656 GN=LOC103495190 PE=4 SV=1	[more]
tr\|A0A2I4HE20\|A0A2I4HE20_9ROSI	3.3e-57	57.21	plastid division protein PDV2-like OS=Juglans regia OX=51240 GN=LOC109016455 PE=...	[more]
tr\|B9H0L6\|B9H0L6_POPTR	1.3e-56	57.62	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G149900v3 PE=...	[more]
tr\|A0A2I4GTD0\|A0A2I4GTD0_9ROSI	1.4e-55	57.08	plastid division protein PDV2-like OS=Juglans regia OX=51240 GN=LOC109010706 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010020	chloroplast fission

Vocabulary: **INTERPRO**
Term	Definition
IPR038939	PDV1/PDV2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G010190.1	CsaV3_7G010190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..66
None	No IPR available	PANTHER	PTHR33600:SF3	PLASTID DIVISION PROTEIN PDV2	coord: 1..301
IPR038939	Plastid division protein PDV1/PDV2	PANTHER	PTHR33600	FAMILY NOT NAMED	coord: 1..301

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G010190	CSPI07G08090	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G010190	Cucsa.220290	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G010190	CmaCh11G017820	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G010190	CmoCh11G013270	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G010190	Cp4.1LG15g05210	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G010190	Cp4.1LG04g08340	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G010190	CsGy7G007640	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G010190	Carg22034	Silver-seed gourd	carcucB0237
CsaV3_7G010190	Cla015966	Watermelon (97103) v1	cucwmB635
CsaV3_7G010190	MELO3C018410	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G010190	ClCG02G005370	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G010190	Lsi11G010540	Bottle gourd (USVL1VR-Ls)	cuclsiB530
CsaV3_7G010190	MELO3C018410.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G010190	Cla97C02G032390	Watermelon (97103) v2	cucwmbB550
CsaV3_7G010190	Bhi05G001043	Wax gourd	cucwgoB688

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G010190	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G010190	Cucurbita moschata (Rifu)	cmocucB0623