CsaV3_7G010130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G010130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 5718888 .. 5719881 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTTCCCCTACATTTATGGCAGTCGTTTATTACGGTTCATATCCAATTTTAACCATATTAAAGTCTAAGTTCGAAGATTTATTCAATTTCGTTGATTTTTTTCAAAAACTAAATTGCAAAAAAAAAAAAAGGGTAGGAAATTAAACGAAAGGAAAAAGTTTTTTTTTTCGCCTCAATGTTTCAAACTAATACACAAGTTAGTCTTAAAAAGGGTTACTATTAATGTCCAATTACTATTACACAAACCTGTGTGATTTTAGTAAATCGCGAATGGGAGCAATTTCAGGAAGGTCGTCTCTTTCCATGGCCATGGTAGAGAAAAAGAGAGATCCAGCATCATCAATTCCACACAAAAACAACATTTATAAAGAAAGAAAGAAAGAAAGAAAAGTGGAGATTTAGATTACAAAATGACTCTAAGTTAGTGTTGGCATCAACAGCAGGGTCGTCACCAAACAATAAACCGATCAATTAGCAAGAAAATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGAAGAATGGGGTTTGTTTTGTTTAGGGTTTATAAAGGAGAATTGATTTCGAGGGAAAAGTTAGAATTGAAGAAGTCTGTGTTCCGCACACGGGTTTGGTTACTGCGGTTAATTGAATATTGTGTGTGTGTGTGTGTATTTATATCCATTAATTCAATCCAATCATATACAAAACTTTGAACTACGCCTCTACGCCCATTGGAAGCCTTGATGTGCTGGATTCTTCTATCTGTATATATTTCTTTCATCAATCA

mRNA sequence

ATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGA

Coding sequence (CDS)

ATGGTGGATTCCGAAAGAATCACCTCCTTGGGGCTGCTGGGTTCATCAATTGCAATTGCTTTGTTCTGTTTGGTAGGGTCCTGGATGGATATCTGGCGGCGATCTGTGGTTGTGATTGTGGGCAAGAAGCGGCTAGAAGAATTAGATAGAAATACATCTCGGAATTTGGCGAGCTGGTTCATGCACATCTCTACGGTGGGCGAAATCTTCATAAAAAGTGAGATTGGGAAAGAGAAGAAGAAGAAGGAAATAAAGTTATGA

Protein sequence

MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWFMHISTVGEIFIKSEIGKEKKKKEIKL
Homology
[Close]
BLAST of CsaV3_7G010130 vs. NCBI nr
Match: KGN43975.1 (hypothetical protein Csa_7G075560 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 3.9e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60
          MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF
Sbjct: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60

Query: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 87
          MHISTVGEIFIKSEIGKEKKKKEIKL
Sbjct: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 86

[Close]
BLAST of CsaV3_7G010130 vs. TrEMBL
Match: tr|A0A0A0K2U2|A0A0A0K2U2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075560 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60
          MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF
Sbjct: 1  MVDSERITSLGLLGSSIAIALFCLVGSWMDIWRRSVVVIVGKKRLEELDRNTSRNLASWF 60

Query: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 87
          MHISTVGEIFIKSEIGKEKKKKEIKL
Sbjct: 61 MHISTVGEIFIKSEIGKEKKKKEIKL 86

The following BLAST results are available for this feature:
BLAST of CsaV3_7G010130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43975.13.9e-39100.00hypothetical protein Csa_7G075560 [Cucumis sativus][more]
BLAST of CsaV3_7G010130 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G010130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G010130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K2U2|A0A0A0K2U2_CUCSA2.6e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075560 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G010130.1CsaV3_7G010130.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G010130CSPI07G08030Wild cucumber (PI 183967)cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G010130Silver-seed gourdcarcucB0237
CsaV3_7G010130Cucumber (Gy14) v2cgybcucB348
CsaV3_7G010130Cucumber (Gy14) v1cgycucB342
CsaV3_7G010130Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G010130Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G010130Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G010130Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G010130Cucurbita pepo (Zucchini)cpecucB0323
CsaV3_7G010130Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G010130Bottle gourd (USVL1VR-Ls)cuclsiB530
CsaV3_7G010130Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G010130Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G010130Watermelon (Charleston Gray)cucwcgB572
CsaV3_7G010130Watermelon (97103) v1cucwmB635
CsaV3_7G010130Watermelon (97103) v2cucwmbB550
CsaV3_7G010130Wax gourdcucwgoB688