CsaV3_7G010020 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G010020
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	protein plastid transcriptionally active 16, chloroplastic
Location	chr7 : 5638458 .. 5641848 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGATTTTTTAGTATGTGGGGACTGTTTGTTTACGATTCCAATCAAATTCCCAGCCATGGATATCAGAATAACCTGAAGAGGACCAACGGAGACCACCACCACTGACTGATCACCGACTCCGTTTCTTCTCTCTACTCTCCTCCTTCCTTCAATGGCCGCGATCATTAACTCCAATTCCTTTATCTTAACCACTACCCCAAACACCCGCCGAAGCTTCAAGAGTCACCGGAGGCAGGTTGCCGTCTTTGCCAAAAACTCTGGATCATTCTCTTCCTTTCGCTTGGGGAAATCTAGCAATGAATCGCCGTCTTCTGATGACGCTCCGGTTGAAGATTCTGGTAATTCAAATCCGTTTCGTTTTTCTTTTGGAAAGGTACCGGATGTGAAGTCTTTGATTCCAGTGGTTAGTGAGCCTTCCTCCGGTTTGTCGTTCGGGAGTTCGAGGCGGAAGGATTCCAATACGGTGTTTGTTGCCGGTGCTACTGGTCAGGCTGGGATTCGGTTAGCGCAGACTCTGTTGCGAGAAGGTTTTAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCCCGTCTTGCTGCTAAGTATAAGGTCAGTTTTGTATGGATTTGGTTGTTCTTTTAATTTATACTTCTACTATTGAATCTAGTCGTTAAGTATTTGGTTAGAACGAATTTCGTATCTGAGAATGGAAGGTGTGGGGATTCCATTGTTTTTTGAAATGATAACTCTACACATGCATCTAATTGTTGCTAGATCAGAACGAATTCTGTATTTGAGAATGGTTGTTGTAAGGATTCATTGTATTTCTATTATTAATTGATGATTCTACTCTTGCGTCCGGTTCTGTACTTCGTTTTGACGAATAACATTGTGATTTGTGCATTTTATTTATCGAACACTGAAGGTCATCTCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCAGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGTGTCGGGGAGAACGGTCCGACCTCTGAAGTTACCACATCAGACGCATTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAGTCGTATACGACGGCAATGCATCAAGCTCCTCCACTTACAATGTACTCGACGGCCTTTCATCGTTCTTCAACAATCTTTTCTCCCGATCTCAGCCATTGTCCGTGGTGGAGCTCTTGCAGAAAATAGTTGAAACCGACATCGGCTATACGTTCATCAAAACGAATTTGGTCGAAGACTTTGCACCTGAGCGTGCGTATAATGTCGTCGTCCAAGCTGAAGGAAGCGCTAGTTCAAACGACTACAAAGTAATGTAATGTATGCGATAGTTATCAAATAATGTTAACAGTTATTTTCCATTTCTCTGATTTCTTCAAGAGAGGTTCATGTTCGTTATGACGGTATGCTGATCTTCGACTTGAACATTGTTTATCAGGTGGCGCAGTCACAAATAGCTTCGTTGGTGGCCGGAGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTGACCTGCAATTTTACTGCTCCGACGATTATGCCCAAAAAACTTTCACAGCTCTTAAGCTTTTAGCCACTCGACTATTTTTATGAAATTGTTTAGACTATTGATTGGGATTTCACATCTAAATTCTTAAGGTCGTGGAAGTGTATTCAAGTCCATCTGCACCCTCAAGTTCTGTGGATCAACTTTTCAGGTAAGATTTTCCCTCTTGGATTAATTGTTTATTAAATAGACCGCCTCCTATCTCCCAATATTAAGTATATCACACAGTTCAAATCTCTCACTAGTGGTCTTTGATTAGGTTTCATTGGTTTCAAAAGCTGCTTGTAATTATTTATGGCAATATCATACTTGGAAACTCTTTCTTTAGTGAGTTTTCTTGGTGGGTTCGGTTTTTTATGGCACTTGTGTTCTTTCTTTCTTTTTTTTTTCCCTCTGCAGTTGTTTTAATTTTTTTTTTTTTTTTAAATCTCACTGGTAACTTTTGAAGATGATAAAATTTGAAATTTGTTCAATTTTAACTCTTATACTCTGGTTTGTCTAATTTTACAATAAACCCTAAAGTTAGTTTTGAATGCTAGTTATTGTTCATTTGTTTGAAAAACTTTTTGTAATATATAGCACTTTTATCGTAAATTTTGCCGCTTTATTTCTTTGTATGAAAATTATTGTCATTATTGTTTAATCAATTTTGATAACAATTAATTACGAAACGTTAAATTTAAGATTTATTAAAATGATGGAAACTAAAATTATACAATTGAAATTAATAAACTTCAAAATTAATAGTATTTAACTTAAAACTTTTCTTTGTTTGAAATGTTTATTATTTATTGTCTTAAACTACAAAATTAATAATAATAAAAAATTAATTAAAAGAAGTCTCTATTTAAAAAATACCCATATCAAAAAGTTGCAATATTATCTCTTTCTTTCACAAAAATTTGATAACTTCTCTGTTTTAACACCAATGTACATGGGTGTGAAAGGAACCTAAAGATGTAAAATTGTAAAGTAAAATGAATTTACTTCATTTTCAAACCAAAGGTGGCAATTGTTTAATGGAGCATTATGATTGGAAGATTAACTAACTGCTTTGTTATAAATTTATATCAGTGTCATTCCCACGGATGGTAGAAGACAAGCATATGCAGAAGCAAAAGCAAAAGCAAAAGCAGAGGAAGAGGCCATAAGAATTGCTGAAAATGCTCGTGAAGAGGCCGAAGCCACAAAGAAACAAGAAGTAGAAGCTGCTAAATCCAAACGACTCTCAGAAAAGGCAGCCACCCAACCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTCCTCCCGCCGAAGAATCAGATCAAATCGCTTTCTTTAATTCCTTCTTGAACAAAGCCAAGGACTTCAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTGTCAGAAAAGGAACCTCAGGAAACCGAAGAAGAAAGCCCCGACACTGCAGGCAATTTAGTGAACAACTTTTTCAATAAAGCGAAGGGGTTTGGCTCGGCACAGCCATGGGAAAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAGATAGCCACAGTTAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGATAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGGTTTGAAGCAGAAAGAAAATTCAAAGCCTAAAGCAGCAGCAACAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGAATGA

mRNA sequence

ATGGCCGCGATCATTAACTCCAATTCCTTTATCTTAACCACTACCCCAAACACCCGCCGAAGCTTCAAGAGTCACCGGAGGCAGGTTGCCGTCTTTGCCAAAAACTCTGGATCATTCTCTTCCTTTCGCTTGGGGAAATCTAGCAATGAATCGCCGTCTTCTGATGACGCTCCGGTTGAAGATTCTGGTAATTCAAATCCGTTTCGTTTTTCTTTTGGAAAGGTACCGGATGTGAAGTCTTTGATTCCAGTGGTTAGTGAGCCTTCCTCCGGTTTGTCGTTCGGGAGTTCGAGGCGGAAGGATTCCAATACGGTGTTTGTTGCCGGTGCTACTGGTCAGGCTGGGATTCGGTTAGCGCAGACTCTGTTGCGAGAAGGTTTTAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCCCGTCTTGCTGCTAAGTATAAGGTCATCTCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCAGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGTGTCGGGGAGAACGGTCCGACCTCTGAAGTTACCACATCAGACGCATTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAGTCGTATACGACGGCAATGCATCAAGCTCCTCCACTTACAATGTACTCGACGGCCTTTCATCGTTCTTCAACAATCTTTTCTCCCGATCTCAGCCATTGTCCGTGGTGGAGCTCTTGCAGAAAATAGTTGAAACCGACATCGGCTATACGTTCATCAAAACGAATTTGGTCGAAGACTTTGCACCTGAGCGTGCGTATAATGTCGTCGTCCAAGCTGAAGGAAGCGCTAGTTCAAACGACTACAAAGTGGCGCAGTCACAAATAGCTTCGTTGGTGGCCGGAGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTCGTGGAAGTGTATTCAAGTCCATCTGCACCCTCAAGTTCTGTGGATCAACTTTTCAGTGTCATTCCCACGGATGGTAGAAGACAAGCATATGCAGAAGCAAAAGCAAAAGCAAAAGCAGAGGAAGAGGCCATAAGAATTGCTGAAAATGCTCGTGAAGAGGCCGAAGCCACAAAGAAACAAGAAGTAGAAGCTGCTAAATCCAAACGACTCTCAGAAAAGGCAGCCACCCAACCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTCCTCCCGCCGAAGAATCAGATCAAATCGCTTTCTTTAATTCCTTCTTGAACAAAGCCAAGGACTTCAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTGTCAGAAAAGGAACCTCAGGAAACCGAAGAAGAAAGCCCCGACACTGCAGGCAATTTAGTGAACAACTTTTTCAATAAAGCGAAGGGGTTTGGCTCGGCACAGCCATGGGAAAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAGATAGCCACAGTTAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGATAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGGTTTGAAGCAGAAAGAAAATTCAAAGCCTAAAGCAGCAGCAACAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGAATGA

Coding sequence (CDS)

ATGGCCGCGATCATTAACTCCAATTCCTTTATCTTAACCACTACCCCAAACACCCGCCGAAGCTTCAAGAGTCACCGGAGGCAGGTTGCCGTCTTTGCCAAAAACTCTGGATCATTCTCTTCCTTTCGCTTGGGGAAATCTAGCAATGAATCGCCGTCTTCTGATGACGCTCCGGTTGAAGATTCTGGTAATTCAAATCCGTTTCGTTTTTCTTTTGGAAAGGTACCGGATGTGAAGTCTTTGATTCCAGTGGTTAGTGAGCCTTCCTCCGGTTTGTCGTTCGGGAGTTCGAGGCGGAAGGATTCCAATACGGTGTTTGTTGCCGGTGCTACTGGTCAGGCTGGGATTCGGTTAGCGCAGACTCTGTTGCGAGAAGGTTTTAGTGTTCGTGCTGGTGTGCCGGAGCTTGGTGCTGCGCAAGAATTGGCCCGTCTTGCTGCTAAGTATAAGGTCATCTCGAATGAAGAATCAAAGCGGCTCAACGCCGTCGAATCCTCCTTTCAAGACGCAGAAGCGATTGCCAAGGCGATCGGAAACGCCAGTAAAGTAGTTGTCACTATTGGTGTCGGGGAGAACGGTCCGACCTCTGAAGTTACCACATCAGACGCATTGCAAGTAATTCAGGCAGCGCAGCTCGCCGGAGTAAGCCATGTGGCAGTCGTATACGACGGCAATGCATCAAGCTCCTCCACTTACAATGTACTCGACGGCCTTTCATCGTTCTTCAACAATCTTTTCTCCCGATCTCAGCCATTGTCCGTGGTGGAGCTCTTGCAGAAAATAGTTGAAACCGACATCGGCTATACGTTCATCAAAACGAATTTGGTCGAAGACTTTGCACCTGAGCGTGCGTATAATGTCGTCGTCCAAGCTGAAGGAAGCGCTAGTTCAAACGACTACAAAGTGGCGCAGTCACAAATAGCTTCGTTGGTGGCCGGAGTTTTCTCGAACACGGCGGTGGCCGAGAACAAGGTCGTGGAAGTGTATTCAAGTCCATCTGCACCCTCAAGTTCTGTGGATCAACTTTTCAGTGTCATTCCCACGGATGGTAGAAGACAAGCATATGCAGAAGCAAAAGCAAAAGCAAAAGCAGAGGAAGAGGCCATAAGAATTGCTGAAAATGCTCGTGAAGAGGCCGAAGCCACAAAGAAACAAGAAGTAGAAGCTGCTAAATCCAAACGACTCTCAGAAAAGGCAGCCACCCAACCATCATCATCATCATCATCTTCTTCTTCTTCTTCTTCTCCTCCCGCCGAAGAATCAGATCAAATCGCTTTCTTTAATTCCTTCTTGAACAAAGCCAAGGACTTCAGTTCAGAACAATCCCAAAAGCTCAAAAAGCTGTCAGAAAAGGAACCTCAGGAAACCGAAGAAGAAAGCCCCGACACTGCAGGCAATTTAGTGAACAACTTTTTCAATAAAGCGAAGGGGTTTGGCTCGGCACAGCCATGGGAAAAGCTATCTTTTCAACTACAAAAACCATCTGAGGAATCAAATGCTCAGATAGCCACAGTTAGAGGACAAGCCAAAGCTCGAGCATTGCCACCAAAGAAAGCATCGATAAGACAAACACAAAAGACCAATTCAAAGCCTTCATTTGGTTTGAAGCAGAAAGAAAATTCAAAGCCTAAAGCAGCAGCAACAGCAGCAGCAGCAGCCAAAGAGGAGACAAAAGCAGAGGTAAGGAAAGTTTTTGGTGGTCTCTTTAAGCAAGAAACCATATATGTTGATGATGAATGA

Protein sequence

MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVEDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSSFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYAEAKAKAKAEEEAIRIAENAREEAEATKKQEVEAAKSKRLSEKAATQPSSSSSSSSSSSSPPAEESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVNNFFNKAKGFGSAQPWEKLSFQLQKPSEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKQKENSKPKAAATAAAAAKEETKAEVRKVFGGLFKQETIYVDDE

Homology

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BLAST of CsaV3_7G010020 vs. NCBI nr
Match: XP_004143209.2 (PREDICTED: protein TIC 62, chloroplastic [Cucumis sativus] >KGN47123.1 hypothetical protein Csa_6G188160 [Cucumis sativus])

HSP 1 Score: 818.9 bits (2114), Expect = 1.1e-233
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE
Sbjct: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120
           DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ
Sbjct: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS
Sbjct: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240

Query: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300
           FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY
Sbjct: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300

Query: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360
           KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX
Sbjct: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360

Query: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480
           XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX
Sbjct: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX 540
           XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX
Sbjct: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX 540

Query: 541 XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE
Sbjct: 541 XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 579

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BLAST of CsaV3_7G010020 vs. NCBI nr
Match: XP_008464084.1 (PREDICTED: protein plastid transcriptionally active 16, chloroplastic [Cucumis melo])

HSP 1 Score: 758.4 bits (1957), Expect = 1.7e-215
Identity = 540/584 (92.47%), Postives = 546/584 (93.49%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSH-RRQVAVFAKNSGSFSSFRLGKSSNESP-SSDDAP 60
           MAAIINSNSFILTTTPN RRSFK+H RRQ AV AKNSGSFSSFRLGKSSNESP SSDD P
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  VEDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRL 120
           +EDSGNSNPFRF FGKVPDVKSLIPVVSEPSSGLSFG+SRRKDSNTVFVAGATGQAGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180
           AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGL 240
           NASKVVVTIG GENGPTSEVTTSDALQVIQAA+LAGVSHVAVVYDGN SSSSTYNVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300
           SSFFNNLFSRSQPLSVVELLQKI ETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAY--- 360
           DYKVA+SQIASLVAGVFSNTAVAENKVVEVYSSPSA SSSVDQLFSVIPTDGRRQAY   
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAEA 360

Query: 361 XXXXXXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                        XXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAKAEEEAMRIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXX 480
           XXXXX  QIAFFNSFLNKAKDFSSEQS KLKKLSEKEPQETEEESPDTA NL XXXXXXX
Sbjct: 421 XXXXXSDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEPQETEEESPDTAANLXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL 540
           XXXXXXXXXXXXXXXXXXXX ESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL 540

Query: 541 KXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           K  XXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 K--XXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of CsaV3_7G010020 vs. NCBI nr
Match: XP_022148339.1 (protein plastid transcriptionally active 16, chloroplastic [Momordica charantia])

HSP 1 Score: 664.1 bits (1712), Expect = 4.4e-187
Identity = 460/586 (78.50%), Postives = 488/586 (83.28%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MAAII SNSFILTT PNTRRSFKSHRRQ AV+A+ SG+F S RLGKSSN SPSSDDAP E
Sbjct: 1   MAAIITSNSFILTTAPNTRRSFKSHRRQFAVYARRSGTFGSLRLGKSSNGSPSSDDAPPE 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEP-SSGLSFGSSRRKDSNTVFVAGATGQAGIRLA 120
           +SGNSNPFRF+FGKVPD+KSLIPVVS P SSGLSFG++RRKD NTVFVAGATGQAGIRLA
Sbjct: 61  ESGNSNPFRFNFGKVPDMKSLIPVVSNPSSSGLSFGNARRKDPNTVFVAGATGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKY VISNEESKRLNAVES+FQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYMVISNEESKRLNAVESTFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLS 240
           A KVVVTIG  ENGPTSEVTTSDALQVIQAAQLAGVSHVA+VYDG+A +SSTYNVLDGLS
Sbjct: 181 AGKVVVTIGAAENGPTSEVTTSDALQVIQAAQLAGVSHVAIVYDGSALNSSTYNVLDGLS 240

Query: 241 SFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSND 300
           SFFNNLFSRSQ LSV ELLQKIVETD+GYTFIKTNLVEDFAPER YNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQQLSVSELLQKIVETDVGYTFIKTNLVEDFAPERTYNVVVGAEGSASSND 300

Query: 301 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXX 360
           YKVA+SQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSV+QLFS IP DGRR+AY    
Sbjct: 301 YKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVEQLFSAIPKDGRREAY---- 360

Query: 361 XXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                  XXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 -----AEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEES-----PDTAGNLVXXXXXX 480
           XXXQIAFFN+FLNKAKDFSSEQSQKLKKL+EKEPQ   +               XXXXXX
Sbjct: 421 XXXQIAFFNTFLNKAKDFSSEQSQKLKKLTEKEPQAPSKAKXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQ-KTNSKPSF 540
           XXXXXX               EESN Q+ATVRGQAKARALP KKA++RQ Q  +NSKP F
Sbjct: 481 XXXXXXQPWEKLAFQLQKPPSEESNVQVATVRGQAKARALPSKKAAVRQPQTNSNSKPPF 540

Query: 541 GLKXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
            +K                    +KAEVRKVFGGLF QET+YVDD+
Sbjct: 541 AVK-------AKENSKPKGKEEGSKAEVRKVFGGLFSQETLYVDDD 570

[Close]

BLAST of CsaV3_7G010020 vs. NCBI nr
Match: XP_023007046.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita maxima])

HSP 1 Score: 638.6 bits (1646), Expect = 2.0e-179
Identity = 440/588 (74.83%), Postives = 469/588 (79.76%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSH-RRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPV 60
           MAAIINSNSFILTT PN RRSF ++ RRQ +V+AK+SG+F+SFRLGKSSN SPSSD AP 
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLA 120
           EDSGNSNP+RF+FGK+PDVKSLIPVVSE SSGLSFG+SRRKD NTVFVAGA+GQAGIRLA
Sbjct: 61  EDSGNSNPYRFNFGKIPDVKSLIPVVSETSSGLSFGNSRRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIG GENGPTSEVTTSDALQVIQAAQLAGV HVA+VYDGNAS+SST NVLDG+S
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASNSSTNNVLDGIS 240

Query: 241 SFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETD+ YTFIK NL EDF PERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQALSVVELLQKIVETDLSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXX 360
           YKVA+S+IASLVAGVFSNTAVAENKVVEVYS+PSAPSSSV+QLFS IPTDGRRQAY    
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAY---- 360

Query: 361 XXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                     XXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 -------AEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXQIAFFNSFLNKAKDFSSEQ--------SQKLKKLSEKEPQETEEESPDTAGNLVXXX 480
              ++AFFN+ LNKAKDFSSEQ                              AG+LV   
Sbjct: 421 ESDEVAFFNTLLNKAKDFSSEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSLVNNF 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKP 540
                                   EESN QIATVRGQAKAR+LP KKA++RQ   TNSKP
Sbjct: 481 LSKAKGFGLQQPWEKLAFQLPKQSEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKP 540

Query: 541 SFGLKXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           SF  K           XXXXXXXX  KAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 SFAAK--------SKEXXXXXXXXEAKAEVRKVFGGLFKQETIYVDDD 568

[Close]

BLAST of CsaV3_7G010020 vs. NCBI nr
Match: XP_023532201.1 (protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 628.2 bits (1619), Expect = 2.7e-176
Identity = 448/588 (76.19%), Postives = 475/588 (80.78%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSH-RRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPV 60
           MAAIINSNSFILTT PN RRSF ++ RRQ +V+AK+SG+F+SFRLGKSSN SPSSD AP 
Sbjct: 1   MAAIINSNSFILTTAPNARRSFDNNSRRQFSVYAKSSGTFASFRLGKSSNGSPSSDGAPA 60

Query: 61  EDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLA 120
           EDSGNSNPFRF+FGK+PDVKSLIPVVS+ SSGLSFG++RRKD NTVFVAGA+GQAGIRLA
Sbjct: 61  EDSGNSNPFRFNFGKIPDVKSLIPVVSDTSSGLSFGNARRKDPNTVFVAGASGQAGIRLA 120

Query: 121 QTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGN 180
           QTLLREGFSVRAGVPEL AAQELARLAAKYKVISNEESKRLNAVESSFQDAE+IAKAIGN
Sbjct: 121 QTLLREGFSVRAGVPELDAAQELARLAAKYKVISNEESKRLNAVESSFQDAESIAKAIGN 180

Query: 181 ASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLS 240
           ASKVVVTIG GENGPTSEVTTSDALQVIQAAQLAGV HVA+VYDGNAS SST NVLDGLS
Sbjct: 181 ASKVVVTIGAGENGPTSEVTTSDALQVIQAAQLAGVGHVAIVYDGNASKSSTNNVLDGLS 240

Query: 241 SFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSND 300
           SFFNNLFSRSQ LSVVELLQKIVETD+ YTFIK NL EDF PERAYNVVV AEGSASSND
Sbjct: 241 SFFNNLFSRSQELSVVELLQKIVETDVSYTFIKANLAEDFEPERAYNVVVGAEGSASSND 300

Query: 301 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXX 360
           YKVA+S+IASLVAGVFSNTAVAENKVVEVYS+PSAPSSSV+QLFS IPTDGRRQAY    
Sbjct: 301 YKVAKSRIASLVAGVFSNTAVAENKVVEVYSTPSAPSSSVEQLFSAIPTDGRRQAY---- 360

Query: 361 XXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
              XXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 --AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXQIAFFNSFLNKAKDFSSE--------QSQKLKKLSEKEPQETEEESPDTAGNLVXXX 480
           XXX +AFFN+ LNKAKDFSSE                                G+LV   
Sbjct: 421 XXXXVAFFNTLLNKAKDFSSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLVNNF 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKP 540
                                   EESN QIATVRGQAKAR+LP KKA++RQ   TNSKP
Sbjct: 481 LSKAKGFGSQQPWEKLAFQLPKLSEESNVQIATVRGQAKARSLPSKKAAVRQAM-TNSKP 540

Query: 541 SFGLKXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           SF  K          XXXXXXXXXX   EVRKVFGGLFKQETIYVDD+
Sbjct: 541 SFAAK--------SKXXXXXXXXXXXXXEVRKVFGGLFKQETIYVDDD 573

[Close]

BLAST of CsaV3_7G010020 vs. TAIR10
Match: AT3G46780.1 (plastid transcriptionally active 16)

HSP 1 Score: 420.2 bits (1079), Expect = 2.0e-117
Identity = 311/582 (53.44%), Postives = 382/582 (65.64%), Query Frame = 0


Query: 6   NSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVEDSGNS 65
           +S SF LTT P     F   + ++ V+AK     ++F+LGK+  +    DD+  +  G  
Sbjct: 4   SSTSFPLTTAPPQGVRFNRRKPRLTVWAKQ----TAFQLGKTKGD----DDSEGKQKG-K 63

Query: 66  NPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQTLLRE 125
           NPF+F FGK+PD+KSLIPVV+ PS+GL FG++R+KD  T+FVAGATGQAGIR+AQTLL+ 
Sbjct: 64  NPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQR 123

Query: 126 GFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVV 185
           GFSVRAGVP+LGAAQ+LAR+AA YK++SN+E KRLNAV+S FQDAE+IAKAIGNA+KVVV
Sbjct: 124 GFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVVV 183

Query: 186 TIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSSFFNNL 245
           T+G  ENGP ++V+TSDAL V+QAA+LAGVSHVA+VYDG   S STYNVLDG++SFF NL
Sbjct: 184 TVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTI-SGSTYNVLDGITSFFGNL 243

Query: 246 FSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGS------ASSND 305
           F++SQPL++ +L++K+ +TD+ YT IKT+L EDF+PE+AYNVVV AEGS           
Sbjct: 244 FAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNXXXXXXXXEA 303

Query: 306 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXX 365
           YKV + +IASLVA +F+NTAVAENKVVEV + PSAPS  VD+LFSVIP DGRR+ Y    
Sbjct: 304 YKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADAI 363

Query: 366 XXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425
               XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              
Sbjct: 364 ARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQKADAVG----- 423

Query: 426 XXXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXX 485
                   +   NKAKD SS  S    KL  +     +  S                   
Sbjct: 424 -----VTVDGLFNKAKDISSGLS--WNKLGSQFATAIQNAS------------------- 483

Query: 486 XXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKT--NSKPSFGLKX 545
                           E    Q+ATVRGQAKAR LPPKKA ++Q   +   SKP      
Sbjct: 484 ----------------ETPKVQVATVRGQAKARNLPPKKAVVKQRPSSPFASKPK----- 510

Query: 546 XXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
                               + EVRKVFGGLFKQETIY+DD+
Sbjct: 544 -------------EERPKKPEKEVRKVFGGLFKQETIYIDDD 510

[Close]

BLAST of CsaV3_7G010020 vs. TAIR10
Match: AT3G18890.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-12
Identity = 74/304 (24.34%), Postives = 140/304 (46.05%), Query Frame = 0


Query: 62  SGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQT 121
           SG S  F  S      +++   V     + L+      K+ + VFVAGATG+ G R  + 
Sbjct: 46  SGKSRSFDLSLRASGPIRASSVVTEASPTNLN-----SKEEDLVFVAGATGKVGSRTVRE 105

Query: 122 LLREGFSVRAGVPELGAAQELARLAAKYKVISNEES----KRLNAVESSFQDAEAIAKAI 181
           LL+ GF VRAGV     A  L +   + K+ + +E     ++L  VE   +  ++I  A+
Sbjct: 106 LLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEKLEIVECDLEKKDSIQPAL 165

Query: 182 GNASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDG 241
           GNAS ++  IG  E    S++T    +  +    L            +A++S+  N    
Sbjct: 166 GNASVIICCIGASEK-EISDITGPYRIDYLATKNLV-----------DAATSAKVNNFIL 225

Query: 242 LSSFFNNLFSRSQPLSVVELL-----------QKIVETDIGYTFIKTNLVE--DFAPERA 301
           ++S   N F    P +++ L            + ++E+ + Y  ++   +E    A +  
Sbjct: 226 VTSLGTNKF--GFPAAILNLFWGVLCWKRKAEEALIESGLNYAIVRPGGMERPTDAYKET 285

Query: 302 YNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFS 349
           +N+ +  + +      +V+  Q+A L+A +  N  ++ +K+VEV +  +AP + +++L  
Sbjct: 286 HNLTLALDDTLFGG--QVSNLQVAELLACMAKNPQLSFSKIVEVVAETTAPLTPIEKLLE 328

[Close]

BLAST of CsaV3_7G010020 vs. TAIR10
Match: AT2G34460.1 (NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.3e-04
Identity = 68/253 (26.88%), Postives = 113/253 (44.66%), Query Frame = 0


Query: 105 VFVAGATGQAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVE 164
           VFVAGATGQ G R+ + LL  GF+V+AGV ++  A+            S ++   L  V 
Sbjct: 49  VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK-----------TSFKDDPSLQIVR 108

Query: 165 SSFQDA-EAIAKAIGNASKVVVTIGVGENG----PTSEVTTSDALQVIQAAQLAGVSHVA 224
           +   +  + +A+ IG+ S+ V+       G       +V     + ++ A +  GV    
Sbjct: 109 ADVTEGPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFV 168

Query: 225 VVYDGNASSSSTYNVLDGLSSFFNNLFSRSQPLSVVELLQK---IVETDIGYTFIKTNLV 284
           +V     + ++   +L+  +  F NLF     L++V  LQ    I ++ I YT ++   +
Sbjct: 169 LVSSILVNGAAMGQILNP-AYLFLNLFG----LTLVAKLQAEKYIKKSGINYTIVRPGGL 228

Query: 285 EDFAPERAYNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAEN---KVVEVYSSPS 344
           ++  P    NVV++ E      D     S    LVA V     + E    KVVE+ +   
Sbjct: 229 KNDPP--TGNVVMEPE------DTLYEGSISRDLVAEVAVEALLQEESSFKVVEIVARAE 277

Query: 345 APSSSVDQLFSVI 347
           AP  S   LF+ +
Sbjct: 289 APKRSYKDLFASV 277

[Close]

BLAST of CsaV3_7G010020 vs. Swiss-Prot
Match: sp|Q9STF2|PTA16_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC16 PE=1 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 3.6e-116
Identity = 311/582 (53.44%), Postives = 382/582 (65.64%), Query Frame = 0


Query: 6   NSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVEDSGNS 65
           +S SF LTT P     F   + ++ V+AK     ++F+LGK+  +    DD+  +  G  
Sbjct: 4   SSTSFPLTTAPPQGVRFNRRKPRLTVWAKQ----TAFQLGKTKGD----DDSEGKQKG-K 63

Query: 66  NPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQTLLRE 125
           NPF+F FGK+PD+KSLIPVV+ PS+GL FG++R+KD  T+FVAGATGQAGIR+AQTLL+ 
Sbjct: 64  NPFQFDFGKLPDMKSLIPVVTNPSTGLVFGNNRKKDPGTIFVAGATGQAGIRIAQTLLQR 123

Query: 126 GFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNASKVVV 185
           GFSVRAGVP+LGAAQ+LAR+AA YK++SN+E KRLNAV+S FQDAE+IAKAIGNA+KVVV
Sbjct: 124 GFSVRAGVPDLGAAQDLARVAATYKILSNDEVKRLNAVQSPFQDAESIAKAIGNATKVVV 183

Query: 186 TIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSSFFNNL 245
           T+G  ENGP ++V+TSDAL V+QAA+LAGVSHVA+VYDG   S STYNVLDG++SFF NL
Sbjct: 184 TVGATENGPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTI-SGSTYNVLDGITSFFGNL 243

Query: 246 FSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGS------ASSND 305
           F++SQPL++ +L++K+ +TD+ YT IKT+L EDF+PE+AYNVVV AEGS           
Sbjct: 244 FAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAYNVVVSAEGSNXXXXXXXXEA 303

Query: 306 YKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXX 365
           YKV + +IASLVA +F+NTAVAENKVVEV + PSAPS  VD+LFSVIP DGRR+ Y    
Sbjct: 304 YKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPEDGRRKVYADAI 363

Query: 366 XXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 425
               XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              
Sbjct: 364 ARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQKADAVG----- 423

Query: 426 XXXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXX 485
                   +   NKAKD SS  S    KL  +     +  S                   
Sbjct: 424 -----VTVDGLFNKAKDISSGLS--WNKLGSQFATAIQNAS------------------- 483

Query: 486 XXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKT--NSKPSFGLKX 545
                           E    Q+ATVRGQAKAR LPPKKA ++Q   +   SKP      
Sbjct: 484 ----------------ETPKVQVATVRGQAKARNLPPKKAVVKQRPSSPFASKPK----- 510

Query: 546 XXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
                               + EVRKVFGGLFKQETIY+DD+
Sbjct: 544 -------------EERPKKPEKEVRKVFGGLFKQETIYIDDD 510

[Close]

BLAST of CsaV3_7G010020 vs. Swiss-Prot
Match: sp|Q8SKU2|TIC62_PEA (Protein TIC 62, chloroplastic OS=Pisum sativum OX=3888 GN=TIC62 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 8.3e-12
Identity = 77/261 (29.50%), Postives = 126/261 (48.28%), Query Frame = 0


Query: 100 KDSNTVFVAGATGQAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVI----SNE 159
           KD N VFVAGATG+ G R  + L++ GF VRAGV     A  L +   + K+       E
Sbjct: 86  KDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRNAQKAGALVQSVKQLKLDGASGGGE 145

Query: 160 ESKRLNAVESSFQDAEAIAKAIGNASKVVVTIGVGE------NGPTSEVTTSDALQVIQA 219
             ++L  VE   + A+ I  A+GNAS V+  IG  E       GP   +       ++ A
Sbjct: 146 AVEKLEIVECDLEKADQIGSALGNASTVICAIGASEKEIFDITGP-CRIDYRATKNLVDA 205

Query: 220 AQLAGVSHVAVVYDGNASSSSTYNVLDGLSSFFNNLFSRSQPLSVVELLQKIVETDIGYT 279
           A +A V+H  +V     +S  T     GL +   NLF     +   +  + ++ + I YT
Sbjct: 206 ATVAKVNHFILV-----TSLGTNKF--GLPAAILNLF-WGVLIWKRKAEEALLASGIPYT 265

Query: 280 FIKTNLVE--DFAPERAYNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAENKVVE 339
            ++   +E    A +  +NV +  E +      +V+  Q+A L+A +  N  ++  K+VE
Sbjct: 266 IVRPGGMERPTDAYKETHNVTLSTEDTLFGG--QVSNLQVAELMAIMAKNPDLSYCKIVE 325

Query: 340 VYSSPSAPSSSVDQLFSVIPT 349
           V +  +AP +  ++L + IP+
Sbjct: 326 VIAETTAPLTPAEKLLTRIPS 335

[Close]

BLAST of CsaV3_7G010020 vs. Swiss-Prot
Match: sp|Q8H0U5|TIC62_ARATH (Protein TIC 62, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC62 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.1e-11
Identity = 74/304 (24.34%), Postives = 140/304 (46.05%), Query Frame = 0


Query: 62  SGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQT 121
           SG S  F  S      +++   V     + L+      K+ + VFVAGATG+ G R  + 
Sbjct: 46  SGKSRSFDLSLRASGPIRASSVVTEASPTNLN-----SKEEDLVFVAGATGKVGSRTVRE 105

Query: 122 LLREGFSVRAGVPELGAAQELARLAAKYKVISNEES----KRLNAVESSFQDAEAIAKAI 181
           LL+ GF VRAGV     A  L +   + K+ + +E     ++L  VE   +  ++I  A+
Sbjct: 106 LLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEKLEIVECDLEKKDSIQPAL 165

Query: 182 GNASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDG 241
           GNAS ++  IG  E    S++T    +  +    L            +A++S+  N    
Sbjct: 166 GNASVIICCIGASEK-EISDITGPYRIDYLATKNLV-----------DAATSAKVNNFIL 225

Query: 242 LSSFFNNLFSRSQPLSVVELL-----------QKIVETDIGYTFIKTNLVE--DFAPERA 301
           ++S   N F    P +++ L            + ++E+ + Y  ++   +E    A +  
Sbjct: 226 VTSLGTNKF--GFPAAILNLFWGVLCWKRKAEEALIESGLNYAIVRPGGMERPTDAYKET 285

Query: 302 YNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFS 349
           +N+ +  + +      +V+  Q+A L+A +  N  ++ +K+VEV +  +AP + +++L  
Sbjct: 286 HNLTLALDDTLFGG--QVSNLQVAELLACMAKNPQLSFSKIVEVVAETTAPLTPIEKLLE 328

[Close]

BLAST of CsaV3_7G010020 vs. Swiss-Prot
Match: sp|Q10A77|TIC62_ORYSJ (Protein TIC 62, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TIC62 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.0e-09
Identity = 83/269 (30.86%), Postives = 123/269 (45.72%), Query Frame = 0


Query: 96  SSRRKDSNTVFVAGATGQAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNE 155
           S   K+++ VF+AGATG+ G R  +  ++ GF VRAGV     A  L +   + KV  + 
Sbjct: 66  SKSTKENDLVFIAGATGKVGSRAVREFIKLGFRVRAGVRSAQRASSLVQSVEQLKVDDDA 125

Query: 156 ES--KRLNAVESSF--QDAEAIAKAIGNASKVVVTIGVGE------NGPTSEVTTSDALQ 215
            S  +RL  VE     Q    I  AIGNA+ VV +IG  E       GP   +       
Sbjct: 126 TSPAERLEIVECDLEKQAQSDIVSAIGNAAIVVCSIGASEKDILDVTGP-YRIDYMATNN 185

Query: 216 VIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSSFFNNLFSRSQPLSVVELLQKIVETD 275
           ++QAA  A V H  +V     +S  T  +  G  +F  NLF       V+   ++  E  
Sbjct: 186 LVQAATAAKVEHFILV-----TSLGTNRI--GFPAFLLNLF-----WGVLCWKRRAEEAL 245

Query: 276 IG----YTFIKTNLVE--DFAPERAYNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTA 335
           IG    YT ++   +E    A +  +N+VV  E +       V+  Q+A L+A + SN  
Sbjct: 246 IGSGLPYTIVRPGGMERPTDAFKETHNLVVAVEDTYVGG--LVSNLQVAELIACIASNRR 305

Query: 336 VAENKVVEVYSSPSAPSSSVDQLFSVIPT 349
            A  KVVE  +  +AP    +   + IP+
Sbjct: 306 TAYCKVVEAIAETTAPLLPTEDQLANIPS 319

[Close]

BLAST of CsaV3_7G010020 vs. TrEMBL
Match: tr|A0A0A0KC77|A0A0A0KC77_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188160 PE=4 SV=1)

HSP 1 Score: 818.9 bits (2114), Expect = 7.1e-234
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE
Sbjct: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120
           DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ
Sbjct: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS
Sbjct: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240

Query: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300
           FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY
Sbjct: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300

Query: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360
           KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX
Sbjct: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360

Query: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480
           XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX
Sbjct: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX 540
           XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX
Sbjct: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX 540

Query: 541 XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE
Sbjct: 541 XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 579

[Close]

BLAST of CsaV3_7G010020 vs. TrEMBL
Match: tr|A0A1S3CL46|A0A1S3CL46_CUCME (protein plastid transcriptionally active 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502056 PE=4 SV=1)

HSP 1 Score: 758.4 bits (1957), Expect = 1.1e-215
Identity = 540/584 (92.47%), Postives = 546/584 (93.49%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSH-RRQVAVFAKNSGSFSSFRLGKSSNESP-SSDDAP 60
           MAAIINSNSFILTTTPN RRSFK+H RRQ AV AKNSGSFSSFRLGKSSNESP SSDD P
Sbjct: 1   MAAIINSNSFILTTTPNARRSFKTHDRRQFAVHAKNSGSFSSFRLGKSSNESPSSSDDPP 60

Query: 61  VEDSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRL 120
           +EDSGNSNPFRF FGKVPDVKSLIPVVSEPSSGLSFG+SRRKDSNTVFVAGATGQAGIRL
Sbjct: 61  LEDSGNSNPFRFPFGKVPDVKSLIPVVSEPSSGLSFGNSRRKDSNTVFVAGATGQAGIRL 120

Query: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180
           AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG
Sbjct: 121 AQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIG 180

Query: 181 NASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGL 240
           NASKVVVTIG GENGPTSEVTTSDALQVIQAA+LAGVSHVAVVYDGN SSSSTYNVLDGL
Sbjct: 181 NASKVVVTIGAGENGPTSEVTTSDALQVIQAAELAGVSHVAVVYDGNTSSSSTYNVLDGL 240

Query: 241 SSFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300
           SSFFNNLFSRSQPLSVVELLQKI ETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN
Sbjct: 241 SSFFNNLFSRSQPLSVVELLQKIAETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSN 300

Query: 301 DYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAY--- 360
           DYKVA+SQIASLVAGVFSNTAVAENKVVEVYSSPSA SSSVDQLFSVIPTDGRRQAY   
Sbjct: 301 DYKVAKSQIASLVAGVFSNTAVAENKVVEVYSSPSASSSSVDQLFSVIPTDGRRQAYAEA 360

Query: 361 XXXXXXXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                        XXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAKAEEEAMRIAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXX 480
           XXXXX  QIAFFNSFLNKAKDFSSEQS KLKKLSEKEPQETEEESPDTA NL XXXXXXX
Sbjct: 421 XXXXXSDQIAFFNSFLNKAKDFSSEQSLKLKKLSEKEPQETEEESPDTAANLXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL 540
           XXXXXXXXXXXXXXXXXXXX ESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL 540

Query: 541 KXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
           K  XXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDD+
Sbjct: 541 K--XXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDD 582

[Close]

BLAST of CsaV3_7G010020 vs. TrEMBL
Match: tr|M5VYK9|M5VYK9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G070200 PE=4 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 6.6e-139
Identity = 355/582 (61.00%), Postives = 405/582 (69.59%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MAA + SNSF+LT+TPN+R +      +++V AK +G  S+FR GKS  +  SSD+   +
Sbjct: 1   MAATLTSNSFLLTSTPNSRATTTLKNPRLSVLAKRAGPLSAFRFGKSGGDGSSSDEGQAD 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120
           DS NS+ FRF FGK+PDVKSLIPVVS+PS GLSFG+ R KD  TVFVAGATGQAG+R+AQ
Sbjct: 61  DSTNSSSFRFDFGKIPDVKSLIPVVSQPSLGLSFGNPRTKDPRTVFVAGATGQAGVRIAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELGAAQELAR+A+KYK+ISNEESKRLNAVES FQDAEAIAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGAAQELARVASKYKIISNEESKRLNAVESVFQDAEAIAKAIGNA 180

Query: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIG  ENGPT+EVT  DALQVIQAAQLAGV HVA++YDGN S  STYNVLDGLSS
Sbjct: 181 SKVVVTIGPAENGPTAEVTPFDALQVIQAAQLAGVGHVAIIYDGNTSGVSTYNVLDGLSS 240

Query: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300
           FFNNLFS SQPL+V E LQK++ET + YTFIKT+L EDF+PE +YNVVV AEGS  +NDY
Sbjct: 241 FFNNLFSGSQPLTVAEFLQKVIETGVSYTFIKTSLTEDFSPESSYNVVVSAEGSGGANDY 300

Query: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360
           KVA++QIA+LVA VF NT+VAENKVVEVY+ PSAPS  VDQLFS IP DGRR+AY     
Sbjct: 301 KVAKAQIANLVADVFLNTSVAENKVVEVYTDPSAPSKPVDQLFSTIPEDGRRKAY----- 360

Query: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                       E AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 361 --AESIAKAKAEEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKAEAA 420

Query: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480
              I   +S  NKAKD  S  S    K S  +  +T ++S +T                 
Sbjct: 421 GGTI---DSLFNKAKDIGSGLS--WDKFS-SQLADTVQKSTET----------------- 480

Query: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQ--TQKTNS-KPSFGLKX 540
                            +  QIATVRGQAKAR LP +KA  +Q  T K  S KP    K 
Sbjct: 481 -----------------TKVQIATVRGQAKARTLPRQKAVAKQVPTPKLASLKPKEQPK- 522

Query: 541 XXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
                                 EVRKVFGGLF QET+YVDD+
Sbjct: 541 ------------PKAKQTDANKEVRKVFGGLFTQETVYVDDD 522

[Close]

BLAST of CsaV3_7G010020 vs. TrEMBL
Match: tr|A0A2N9ISW5|A0A2N9ISW5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55510 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.3e-138
Identity = 361/578 (62.46%), Postives = 417/578 (72.15%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MA  + SNSF+L TTP++R + K  R  + +FAK +G F S R GKS++ S S +  P +
Sbjct: 1   MAPTLTSNSFLLNTTPHSRLTLKKTR--LTIFAKQAGPFPSLRFGKSNDGSSSGEPQP-D 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120
           DS N+NP RF+FGK+PDVKSLIP VS PSSGLSF +SRRKD  TVFVAGATGQAGIR+AQ
Sbjct: 61  DSANTNPLRFNFGKIPDVKSLIPAVSNPSSGLSFANSRRKDPGTVFVAGATGQAGIRIAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGFSVRAGVPELG+AQELARLAA+YK+ISNEES+RLNAVES+F+D E+IAKAIGNA
Sbjct: 121 TLLREGFSVRAGVPELGSAQELARLAAQYKIISNEESRRLNAVESTFKDTESIAKAIGNA 180

Query: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIG  ENGPTSEV+ SDALQVIQAAQLAGV HVA++ DGN +++STYNVLDG+SS
Sbjct: 181 SKVVVTIGPTENGPTSEVSPSDALQVIQAAQLAGVGHVAIICDGNIAAASTYNVLDGISS 240

Query: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300
           FFNNLFSRSQPL+V E LQK++ETD+ YTFIKT+L EDF+PE++YNVVV AE S SS DY
Sbjct: 241 FFNNLFSRSQPLTVTEFLQKVIETDVSYTFIKTSLTEDFSPEKSYNVVVSAERSTSSYDY 300

Query: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360
           KVA+SQIASLVA VFSNTAVAENKVVEV++ PSAPS  VD+LFS IP DGRR+AY     
Sbjct: 301 KVAKSQIASLVANVFSNTAVAENKVVEVFTDPSAPSKRVDELFSAIPEDGRRKAYAESLA 360

Query: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
             XXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXX                   
Sbjct: 361 KVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEDAQEKADAAG------ 420

Query: 421 XXQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXXXXXXX 480
               A     LNKAKDF S  S   +K S +    T  + P+                  
Sbjct: 421 ----ASVEILLNKAKDFGSGLS--WEKFSSQ--LTTAVQKPE------------------ 480

Query: 481 XXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGLKXXXX 540
                          E+   QIATVRGQAKAR+LP  KA ++    + S PSF  K    
Sbjct: 481 ---------------EKPKVQIATVRGQAKARSLPSMKAVVK--PPSLSFPSFKPK---- 519

Query: 541 XXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDD 579
               XXXXXXXXXXXX K EVRKVFGGLF QET+Y+D+
Sbjct: 541 ---EXXXXXXXXXXXXXKKEVRKVFGGLFTQETVYIDE 519

[Close]

BLAST of CsaV3_7G010020 vs. TrEMBL
Match: tr|A0A2P5D6B7|A0A2P5D6B7_9ROSA (Hopanoid-associated sugar epimerase OS=Trema orientalis OX=63057 GN=TorRG33x02_261170 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 4.7e-137
Identity = 362/584 (61.99%), Postives = 420/584 (71.92%), Query Frame = 0


Query: 1   MAAIINSNSFILTTTPNTRRSFKSHRRQVAVFAKNSGSFSSFRLGKSSNESPSSDDAPVE 60
           MA+ + SNSF+L++ PN+R      R+++ +FAK SG FSSFRLGKS+ E+ SS++   E
Sbjct: 1   MASSLTSNSFLLSSAPNSRGLTLKTRQRLRIFAKGSGPFSSFRLGKSAGEASSSEE---E 60

Query: 61  DSGNSNPFRFSFGKVPDVKSLIPVVSEPSSGLSFGSSRRKDSNTVFVAGATGQAGIRLAQ 120
               S+PFR +FGKVPDVKSLIPVVS P+SGLSFGS RRKD+ TVFVAGATGQAGIR+AQ
Sbjct: 61  GEPTSSPFRLNFGKVPDVKSLIPVVSSPASGLSFGSPRRKDAGTVFVAGATGQAGIRIAQ 120

Query: 121 TLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESKRLNAVESSFQDAEAIAKAIGNA 180
           TLLREGF+VRAGV ELGAAQELARLAAKYK+ISNEESKRLNAVES+FQDAE+IAKAIGNA
Sbjct: 121 TLLREGFTVRAGVTELGAAQELARLAAKYKIISNEESKRLNAVESTFQDAESIAKAIGNA 180

Query: 181 SKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHVAVVYDGNASSSSTYNVLDGLSS 240
           SKVVVTIG  E+GP+ EV+T DAL+V+QAA+LAGV HVA+VYDGN +S+STYNVLDG+SS
Sbjct: 181 SKVVVTIGPTEDGPSQEVSTLDALRVVQAAELAGVGHVAIVYDGNTASASTYNVLDGISS 240

Query: 241 FFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVEDFAPERAYNVVVQAEGSASSNDY 300
           FFNNLFSRSQ LS+ E LQK++ETD+ YTFIKT+L  D++PE  YNVVV AEGS  +NDY
Sbjct: 241 FFNNLFSRSQQLSIPEFLQKVIETDVSYTFIKTSLTADYSPESTYNVVVSAEGSIGANDY 300

Query: 301 KVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSSVDQLFSVIPTDGRRQAYXXXXX 360
           KVA SQIASLVA VFSNTAVAENKVV+V++ PSAPS  +  LFS IP DGRR+AY     
Sbjct: 301 KVATSQIASLVANVFSNTAVAENKVVDVFTDPSAPSRPIADLFSSIPEDGRRKAY----- 360

Query: 361 XXXXXXXXXXXXENAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                       +      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 -----AETLAKAKAEEEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXQIAFFNSFLNKAKDFSS-----EQSQKLKKLSEKEPQETEEESPDTAGNLVXXXXXXX 480
           XX  A F +  NKAKD  S     + S +L   + ++PQET +                 
Sbjct: 421 XXXXASFENLFNKAKDIGSGISWEKLSTQLAATTVQKPQETPK----------------- 480

Query: 481 XXXXXXXXXXXXXXXXXXXXEESNAQIATVRGQAKARALPPKKASIRQTQKTNSKPSFGL 540
                                    QIATVRGQAKAR LP  KA ++Q +   SKP    
Sbjct: 481 ------------------------VQIATVRGQAKARTLPSLKAIVKQNRPA-SKP---- 519

Query: 541 KXXXXXXXXXXXXXXXXXXXXTKAEVRKVFGGLFKQETIYVDDE 580
                 XXXXXXXXX         EVRKVFGGLFKQETIYVDD+
Sbjct: 541 ------XXXXXXXXXGKQTEAKSPEVRKVFGGLFKQETIYVDDD 519

The following BLAST results are available for this feature:

BLAST of CsaV3_7G010020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143209.2	1.1e-233	100.00	PREDICTED: protein TIC 62, chloroplastic [Cucumis sativus] >KGN47123.1 hypotheti...	[more]
XP_008464084.1	1.7e-215	92.47	PREDICTED: protein plastid transcriptionally active 16, chloroplastic [Cucumis m...	[more]
XP_022148339.1	4.4e-187	78.50	protein plastid transcriptionally active 16, chloroplastic [Momordica charantia]	[more]
XP_023007046.1	2.0e-179	74.83	protein plastid transcriptionally active 16, chloroplastic [Cucurbita maxima]	[more]
XP_023532201.1	2.7e-176	76.19	protein plastid transcriptionally active 16, chloroplastic [Cucurbita pepo subsp...	[more]

BLAST of CsaV3_7G010020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46780.1	2.0e-117	53.44	plastid transcriptionally active 16	[more]
AT3G18890.1	2.3e-12	24.34	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G34460.1	2.3e-04	26.88	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of CsaV3_7G010020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9STF2\|PTA16_ARATH	3.6e-116	53.44	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 16, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q8SKU2\|TIC62_PEA	8.3e-12	29.50	Protein TIC 62, chloroplastic OS=Pisum sativum OX=3888 GN=TIC62 PE=1 SV=2	[more]
sp\|Q8H0U5\|TIC62_ARATH	4.1e-11	24.34	Protein TIC 62, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC62 PE=1 SV=1	[more]
sp\|Q10A77\|TIC62_ORYSJ	1.0e-09	30.86	Protein TIC 62, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TIC62 ...	[more]

BLAST of CsaV3_7G010020 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KC77\|A0A0A0KC77_CUCSA	7.1e-234	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188160 PE=4 SV=1	[more]
tr\|A0A1S3CL46\|A0A1S3CL46_CUCME	1.1e-215	92.47	protein plastid transcriptionally active 16, chloroplastic OS=Cucumis melo OX=36...	[more]
tr\|M5VYK9\|M5VYK9_PRUPE	6.6e-139	61.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G070200 PE=4 SV=1	[more]
tr\|A0A2N9ISW5\|A0A2N9ISW5_FAGSY	4.3e-138	62.46	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55510 PE=4 SV=1	[more]
tr\|A0A2P5D6B7\|A0A2P5D6B7_9ROSA	4.7e-137	61.99	Hopanoid-associated sugar epimerase OS=Trema orientalis OX=63057 GN=TorRG33x02_2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR016040	NAD(P)-bd_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010114	response to red light
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044711	single-organism biosynthetic process
biological_process	GO:0009416	response to light stimulus
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0010103	stomatal complex morphogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010218	response to far red light
biological_process	GO:0009637	response to blue light
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0019761	glucosinolate biosynthetic process
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0016117	carotenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009508	plastid chromosome
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0044434	chloroplast part
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G010020.1	CsaV3_7G010020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 355..392
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 89..338 e-value: 1.3E-19 score: 72.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 520..536
None	No IPR available	PANTHER	PTHR14194:SF95	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC	coord: 443..555 coord: 1..442
None	No IPR available	PANTHER	PTHR14194	NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED	coord: 443..555 coord: 1..442
IPR016040	NAD(P)-binding domain	PFAM	PF13460	NAD_binding_10	coord: 109..317 e-value: 2.8E-15 score: 56.6
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 102..332

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G010020	CSPI06G14210	Wild cucumber (PI 183967)	cpicucB377
CsaV3_7G010020	Cucsa.138920	Cucumber (Gy14) v1	cgycucB210
CsaV3_7G010020	CmaCh02G007770	Cucurbita maxima (Rimu)	cmacucB0770
CsaV3_7G010020	CmoCh02G007780	Cucurbita moschata (Rifu)	cmocucB0756
CsaV3_7G010020	Cp4.1LG05g09240	Cucurbita pepo (Zucchini)	cpecucB0949
CsaV3_7G010020	CsGy6G014050	Cucumber (Gy14) v2	cgybcucB309
CsaV3_7G010020	Carg26589	Silver-seed gourd	carcucB0954
CsaV3_7G010020	Cla013329	Watermelon (97103) v1	cucwmB637
CsaV3_7G010020	MELO3C025888	Melon (DHL92) v3.5.1	cucmeB529
CsaV3_7G010020	ClCG02G019880	Watermelon (Charleston Gray)	cucwcgB574
CsaV3_7G010020	Lsi10G014020	Bottle gourd (USVL1VR-Ls)	cuclsiB525
CsaV3_7G010020	MELO3C025888.2	Melon (DHL92) v3.6.1	cucmedB517
CsaV3_7G010020	Cla97C02G045880	Watermelon (97103) v2	cucwmbB553
CsaV3_7G010020	Bhi10G000596	Wax gourd	cucwgoB705

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_7G010020	CsaV3_6G016590	Cucumber (Chinese Long) v3	cuccucB217

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G010020	Cucumber (Gy14) v2	cgybcucB098
CsaV3_7G010020	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G010020	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G010020	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G010020	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G010020	Cucurbita maxima (Rimu)	cmacucB0690
CsaV3_7G010020	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G010020	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G010020	Cucurbita moschata (Rifu)	cmocucB0675
CsaV3_7G010020	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G010020	Cucurbita pepo (Zucchini)	cpecucB0370
CsaV3_7G010020	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G010020	Wild cucumber (PI 183967)	cpicucB122
CsaV3_7G010020	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G010020	Bottle gourd (USVL1VR-Ls)	cuclsiB530
CsaV3_7G010020	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G010020	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G010020	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G010020	Watermelon (97103) v1	cucwmB635
CsaV3_7G010020	Watermelon (97103) v2	cucwmbB550
CsaV3_7G010020	Wax gourd	cucwgoB688
CsaV3_7G010020	Silver-seed gourd	carcucB0237
CsaV3_7G010020	Silver-seed gourd	carcucB0379