CsaV3_7G008820 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G008820
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr7 : 5499742 .. 5503239 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTCATTCCTTTTAAATATTTCTCTCTCTCAGTATTTTAAGTTTTATAGTTTAAAAGAATTTACTTTAATTTTACCGCTAAATATAACGTTATTTGGAGGTTTTCAACGTTCTGCCCACAATTCCATGGCGGAAGACACCGAAGCTCAAGTTCAAAGTCCAAAACCCGCCAAGCCATGAGTGCCATTGTTGATGGCTTTTCTCTCTCGCTTTTGTTCTTTAAAAATTTTATATCTGTCCTTGGAAATGCCAACCAAATTTCTACAGTTATGTGCAGCTTCAACTTCCACTACGACCCAAACAATCTCCTCAACCAGGAAGACTTTCTCTCATATATTTCAGGAATGCTCCAACCGGAGAGCTCTAAAACCAGGTAAGGAAGCTCATGCCCATATGATTCTATCTGGGTTTACTCCCACTGTGTTTGTAACCAATTGTTTAATCCAAATGTATGTCAAATGTTGCGCTTTGGAATATGCATATAAGGTGTTTGAGGAAATGCCACAGAGGGACATTGTGTCTTGGAACACCATGGTTTTTGGCTGTGCAGGGGCTGGAAGGATGGAGCTTGCACAGGCGGTGTTTAATTCCATGCCTCATCATGGAGATGTGGTTTCATGGAATTCTTTGATTTCTGGGTACTTGCAGAATGGTGACATACAAAAGTCGATCGCTGTCTTTTTGAAAATGAGAGATTTGGGAGTTATGTTTGACCATACCACGCTGGCTGTTTCTTTAAAAATTTGCTCTTTGTTGGAAGATCAGGTTCTGGGAATTCAGATTCATGGTATTGCAGTTCAAATGGGTTTTGATTATGATGTTGTGACAGGGAGTGCTTTAGTGGATATGTATGCCAAGTGTAACAGCTTAGAGGATTCACTTGATGTTTTCTCTGAATTGCCAGATAAGAATTGGATTTCATGGAGTGCGGCAATTGCAGGTTGTGTTCAGAATGATCAGTTGCTTAGGGGCCTTAAACTATTCAAAGAGATGCAGAGAAAGGGAATTGGGGTGAGTCAATCTACTTATGCTAGTGTCTTTAGGTCTTGTGCAGGACTATCAGCCTCTAGATTAGGTACTCAGTTGCATTGCCATGCATTAAAGACTGACTTCGGATCTGATGTTATTGTAGGAACTGCCACTTTGGATATGTATGCTAAGTGTGACAACATGTCTGATGCCTACAAGCTATTTAGCTTATTACCAGACCATAACTTACAATCTTACAATGCCATGATAATTGGGTATGCTCGGAATGAGCAAGGGTTTCAAGCTTTTAAGCTATTTCTTCAGTTGCAGAAGAACAGTTTTAGTTTTGATGAAGTATCTCTTTCTGGTGCATTAAGTGCAGCTGCAGTAATCAAAGGGCACTCTGAGGGGCTTCAACTACATGGGTTAGCCATCAAATCTAATTTATCGTCAAATATCTGTGTCGCAAACGCCATCTTGGATATGTATGGCAAATGTGGAGCTTTAGTTGAGGCTTCTGGCCTGTTTGATGAAATGGAAATAAGGGATCCGGTGTCTTGGAATGCTATCATCACAGCTTGTGAGCAGAATGAAAGTGAAGGGAAAACGCTCTCACATTTTGGTGCAATGCTACGTTCAAAGATGGAACCTGATGAGTTCACATATGGTAGTGTTTTAAAAGCTTGTGCAGGTCAGCGAGCTTTCAGTAATGGCATGGAGGTTCATGGAAGAATTATCAAATCTGGAATGGGTCTCAAAATGTTTGTAGGAAGTGCGCTCGTTGATATGTATTCCAAATGTGGAATGATGGAAGAGGCAGAAAAGATCCATTACCGGCTGGAAGAACAAACAATGGTCTCATGGAATGCAATTATTTCAGGATTTTCATTGCAAAAGAAAAGTGAAGATTCACAAAGATTTTTCTCTCATATGTTGGAAATGGGTGTAGAGCCCGACAACTTCACTTATGCAACTGTTCTAGACACTTGTGCTAATTTAGCTACTGTTGGACTAGGAAAGCAAATCCATGCACAAATGATCAAGCTGGAACTGCTATCAGATGTGTACATAACCAGCACTCTTGTTGACATGTACTCCAAATGTGGAAATATGCATGATTCTCTACTTATGTTTCGGAAAGCTCCCAAGCGGGATTCTGTCACATGGAATGCCATGATCTGTGGATTTGCCTACCATGGTCTTGGGGAAGAGGCTCTTGAGCTTTTTGAACATATGCTCCATGAGAATATAAAACCAAACCATGCAACTTTTGTTTCGGTCCTCCGAGCATGTTCGCACGTTGGAAATGCTAAGAAGGGCCTGTTTTATTTTCAGAAAATGGCAAGTATCTATGCTTTAGAACCTCAACTTGAGCACTACTCATGTATGGTGGATATTTTAGGGAGATCAGGCCAAGTAGAAGAAGCATTGAGACTAATTCAGGACATGCCATTTGAAGCAGATGCAATTATATGGAGAACTTTGCTTAGTATTTGCAAAATTCAGGGAAATGTAGAAGTTGCTGAAAAAGCAGCTAGTTCACTTTTGAAATTGGATCCAGAAGACTCGTCTGCTTACACCCTTCTATCAAATATATATGCTGATGCAGGCATGTGGCAACAAGTCTCAAAGATCAGACAAACAATGAGATCTCACAATTTGAAAAAGGAGCCAGGTTGCAGCTGGATTGAGGTAAAAGATGAAGTACATACATTTCTTGTTTGTGATAAAGCACATCCGAAATGTGAAATGATCTATAGCCTGCTTGATTTGTTGATTTGCGATATGAGAAGGTCTGGATGTGCCCCTGAAATAGACACCATACAAGTTGAGGAGGTTGAAGAAAATAGGCATCAAAAGGTCAAATCCAACGGATTTTCTTAGTGTCAAGTGTTGAAAATGGTGGGCATCGGTATTAATTATGGATAGTTACTCTGTCTTCTCAGTCAGTTGGGATTTCTTGGACGTTGTGCCAAGGAAAGGCAAGAGTTTGTTTGGAGGTGATTTTGAAATAGTTTAAATCATTTTGAAATATGCTTTTAGTCGTTCAAAACAAACTAGGGTGATTAAAAGTGTGCTTCAGAACGACTTGAAACATGAAAGGAGTGATTTTGATGGTTCTAAAATCATGCACCAAACCAGTTTTGTCAAATGGACTATGAGATTGGTTTGTCAAATGGACCGTGAGATTAATTTAAAGTTGGAGAAGTAAATTTTTCTTTAGAGTTGGGAAGTAGATTCTGAAGTATTGGCGCAAACAATCCCACATGCATTGTGGTGAGCTTCCAAGAAATGGTACGATGATAATTGATAAAGAAGACTTCCTACAAACTTAACCTTGTGTTACTATTGTTGATTTACCCAAAACAAATATTAATTAATTATTTTTAAATTTGAGATCGAGTTCATATCTAGATAAAAAATCCAATATACCTTATAAAATTCAAAGTTTATGGTTTAATAGGTTGGTGGTGTATTTTAGGTAACCACCATTAATATTGTTGAATATACGAAATTTAGAATAGTT

mRNA sequence

ATGTATGCTAAGTGTGACAACATGTCTGATGCCTACAAGCTATTTAGCTTATTACCAGACCATAACTTACAATCTTACAATGCCATGATAATTGGGTATGCTCGGAATGAGCAAGGGTTTCAAGCTTTTAAGCTATTTCTTCAGTTGCAGAAGAACAGTTTTAGTTTTGATGAAGTATCTCTTTCTGGTGCATTAAGTGCAGCTGCAGTAATCAAAGGGCACTCTGAGGGGCTTCAACTACATGGGTTAGCCATCAAATCTAATTTATCGTCAAATATCTGTGTCGCAAACGCCATCTTGGATATGTATGGCAAATGTGGAGCTTTAGTTGAGGCTTCTGGCCTGTTTGATGAAATGGAAATAAGGGATCCGGTGTCTTGGAATGCTATCATCACAGCTTGTGAGCAGAATGAAAGTGAAGGGAAAACGCTCTCACATTTTGGTGCAATGCTACGTTCAAAGATGGAACCTGATGAGTTCACATATGGTAGTGTTTTAAAAGCTTGTGCAGGTCAGCGAGCTTTCAGTAATGGCATGGAGGTTCATGGAAGAATTATCAAATCTGGAATGGGTCTCAAAATGTTTGTAGGAAGTGCGCTCGTTGATATGTATTCCAAATGTGGAATGATGGAAGAGGCAGAAAAGATCCATTACCGGCTGGAAGAACAAACAATGGTCTCATGGAATGCAATTATTTCAGGATTTTCATTGCAAAAGAAAAGTGAAGATTCACAAAGATTTTTCTCTCATATGTTGGAAATGGGTGTAGAGCCCGACAACTTCACTTATGCAACTGTTCTAGACACTTGTGCTAATTTAGCTACTGTTGGACTAGGAAAGCAAATCCATGCACAAATGATCAAGCTGGAACTGCTATCAGATGTGTACATAACCAGCACTCTTGTTGACATGTACTCCAAATGTGGAAATATGCATGATTCTCTACTTATGTTTCGGAAAGCTCCCAAGCGGGATTCTGTCACATGGAATGCCATGATCTGTGGATTTGCCTACCATGGTCTTGGGGAAGAGGCTCTTGAGCTTTTTGAACATATGCTCCATGAGAATATAAAACCAAACCATGCAACTTTTGTTTCGGTCCTCCGAGCATGTTCGCACGTTGGAAATGCTAAGAAGGGCCTGTTTTATTTTCAGAAAATGGCAAGTATCTATGCTTTAGAACCTCAACTTGAGCACTACTCATGTATGGTGGATATTTTAGGGAGATCAGGCCAAGTAGAAGAAGCATTGAGACTAATTCAGGACATGCCATTTGAAGCAGATGCAATTATATGGAGAACTTTGCTTAGTATTTGCAAAATTCAGGGAAATGTAGAAGTTGCTGAAAAAGCAGCTAGTTCACTTTTGAAATTGGATCCAGAAGACTCGTCTGCTTACACCCTTCTATCAAATATATATGCTGATGCAGGCATGTGGCAACAAGTCTCAAAGATCAGACAAACAATGAGATCTCACAATTTGAAAAAGGAGCCAGGTTGCAGCTGGATTGAGGTAAAAGATGAAGTACATACATTTCTTGTTTGTGATAAAGCACATCCGAAATGTGAAATGATCTATAGCCTGCTTGATTTGTTGATTTGCGATATGAGAAGGTCTGGATGTGCCCCTGAAATAGACACCATACAAGTTGAGGAGGTTGAAGAAAATAGGCATCAAAAGGTCAAATCCAACGGATTTTCTTAG

Coding sequence (CDS)

ATGTATGCTAAGTGTGACAACATGTCTGATGCCTACAAGCTATTTAGCTTATTACCAGACCATAACTTACAATCTTACAATGCCATGATAATTGGGTATGCTCGGAATGAGCAAGGGTTTCAAGCTTTTAAGCTATTTCTTCAGTTGCAGAAGAACAGTTTTAGTTTTGATGAAGTATCTCTTTCTGGTGCATTAAGTGCAGCTGCAGTAATCAAAGGGCACTCTGAGGGGCTTCAACTACATGGGTTAGCCATCAAATCTAATTTATCGTCAAATATCTGTGTCGCAAACGCCATCTTGGATATGTATGGCAAATGTGGAGCTTTAGTTGAGGCTTCTGGCCTGTTTGATGAAATGGAAATAAGGGATCCGGTGTCTTGGAATGCTATCATCACAGCTTGTGAGCAGAATGAAAGTGAAGGGAAAACGCTCTCACATTTTGGTGCAATGCTACGTTCAAAGATGGAACCTGATGAGTTCACATATGGTAGTGTTTTAAAAGCTTGTGCAGGTCAGCGAGCTTTCAGTAATGGCATGGAGGTTCATGGAAGAATTATCAAATCTGGAATGGGTCTCAAAATGTTTGTAGGAAGTGCGCTCGTTGATATGTATTCCAAATGTGGAATGATGGAAGAGGCAGAAAAGATCCATTACCGGCTGGAAGAACAAACAATGGTCTCATGGAATGCAATTATTTCAGGATTTTCATTGCAAAAGAAAAGTGAAGATTCACAAAGATTTTTCTCTCATATGTTGGAAATGGGTGTAGAGCCCGACAACTTCACTTATGCAACTGTTCTAGACACTTGTGCTAATTTAGCTACTGTTGGACTAGGAAAGCAAATCCATGCACAAATGATCAAGCTGGAACTGCTATCAGATGTGTACATAACCAGCACTCTTGTTGACATGTACTCCAAATGTGGAAATATGCATGATTCTCTACTTATGTTTCGGAAAGCTCCCAAGCGGGATTCTGTCACATGGAATGCCATGATCTGTGGATTTGCCTACCATGGTCTTGGGGAAGAGGCTCTTGAGCTTTTTGAACATATGCTCCATGAGAATATAAAACCAAACCATGCAACTTTTGTTTCGGTCCTCCGAGCATGTTCGCACGTTGGAAATGCTAAGAAGGGCCTGTTTTATTTTCAGAAAATGGCAAGTATCTATGCTTTAGAACCTCAACTTGAGCACTACTCATGTATGGTGGATATTTTAGGGAGATCAGGCCAAGTAGAAGAAGCATTGAGACTAATTCAGGACATGCCATTTGAAGCAGATGCAATTATATGGAGAACTTTGCTTAGTATTTGCAAAATTCAGGGAAATGTAGAAGTTGCTGAAAAAGCAGCTAGTTCACTTTTGAAATTGGATCCAGAAGACTCGTCTGCTTACACCCTTCTATCAAATATATATGCTGATGCAGGCATGTGGCAACAAGTCTCAAAGATCAGACAAACAATGAGATCTCACAATTTGAAAAAGGAGCCAGGTTGCAGCTGGATTGAGGTAAAAGATGAAGTACATACATTTCTTGTTTGTGATAAAGCACATCCGAAATGTGAAATGATCTATAGCCTGCTTGATTTGTTGATTTGCGATATGAGAAGGTCTGGATGTGCCCCTGAAATAGACACCATACAAGTTGAGGAGGTTGAAGAAAATAGGCATCAAAAGGTCAAATCCAACGGATTTTCTTAG

Protein sequence

MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEENRHQKVKSNGFS

Homology

[Close]

BLAST of CsaV3_7G008820 vs. NCBI nr
Match: KGN43953.1 (hypothetical protein Csa_7G074860 [Cucumis sativus])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS
Sbjct: 302 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 361

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME
Sbjct: 362 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 421

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME
Sbjct: 422 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 481

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 482 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 541

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST
Sbjct: 542 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 601

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN
Sbjct: 602 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 661

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI
Sbjct: 662 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 721

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ
Sbjct: 722 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 781

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 782 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 841

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 842 CAPEIDTIQVEEVEENRHQKVKSNGFS 868

[Close]

BLAST of CsaV3_7G008820 vs. NCBI nr
Match: XP_004137118.2 (PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X1 [Cucumis sativus])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS
Sbjct: 320 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 379

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME
Sbjct: 380 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 439

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME
Sbjct: 440 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 499

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 500 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 559

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST
Sbjct: 560 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 619

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN
Sbjct: 620 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 679

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI
Sbjct: 680 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 739

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ
Sbjct: 740 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 799

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 800 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 859

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 860 CAPEIDTIQVEEVEENRHQKVKSNGFS 886

[Close]

BLAST of CsaV3_7G008820 vs. NCBI nr
Match: XP_011658917.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X2 [Cucumis sativus])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS
Sbjct: 281 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 340

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME
Sbjct: 341 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 400

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME
Sbjct: 401 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 460

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 461 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 520

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST
Sbjct: 521 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 580

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN
Sbjct: 581 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 640

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI
Sbjct: 641 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 700

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ
Sbjct: 701 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 760

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 761 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 820

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 821 CAPEIDTIQVEEVEENRHQKVKSNGFS 847

[Close]

BLAST of CsaV3_7G008820 vs. NCBI nr
Match: XP_011658918.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X3 [Cucumis sativus])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS
Sbjct: 218 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 277

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME
Sbjct: 278 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 337

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME
Sbjct: 338 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 397

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 398 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 457

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST
Sbjct: 458 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 517

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN
Sbjct: 518 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 577

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI
Sbjct: 578 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 637

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ
Sbjct: 638 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 697

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 698 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 757

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 758 CAPEIDTIQVEEVEENRHQKVKSNGFS 784

[Close]

BLAST of CsaV3_7G008820 vs. NCBI nr
Match: XP_008454910.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X1 [Cucumis melo])

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 550/567 (97.00%), Postives = 558/567 (98.41%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC NMSDAYKLFSLLPDHNLQSYNAMII YARNEQG QAFKLFLQLQKNSFSFDE+S
Sbjct: 320 MYAKCHNMSDAYKLFSLLPDHNLQSYNAMIIAYARNEQGIQAFKLFLQLQKNSFSFDEIS 379

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEG+QLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS LFDEME
Sbjct: 380 LSGALSAAAVIKGHSEGIQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASCLFDEME 439

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRD VSWNAIITACEQNE++ KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ+AFSNGME
Sbjct: 440 IRDAVSWNAIITACEQNENDRKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQQAFSNGME 499

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMY KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 500 VHGRIIKSGMGLKMFVGSALVDMYCKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 559

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ+IKLELLSDVYITST
Sbjct: 560 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQIIKLELLSDVYITST 619

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG AYHGLGEEALELFEHMLHENIKPN
Sbjct: 620 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGCAYHGLGEEALELFEHMLHENIKPN 679

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQV EALRLI
Sbjct: 680 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVGEALRLI 739

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS+AYTLLSNIYADAGMWQ
Sbjct: 740 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSAAYTLLSNIYADAGMWQ 799

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC+KAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 800 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCEKAHPKCEMIYSLLDLLICDMRRSG 859

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 860 CAPEIDTIQVEEVEENRHQKVKSNGFS 886

[Close]

BLAST of CsaV3_7G008820 vs. TAIR10
Match: AT3G02330.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 694.5 bits (1791), Expect = 5.4e-200
Identity = 346/576 (60.07%), Postives = 433/576 (75.17%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNM DA  LF    + N QSYNAMI GY++ E GF+A  LF +L  +   FDE+S
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSG   A A++KG SEGLQ++GLAIKS+LS ++CVANA +DMYGKC AL EA  +FDEM 
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
            RD VSWNAII A EQN    +TL  F +MLRS++EPDEFT+GS+LKAC G  +   GME
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGME 504

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT---------------- 240
           +H  I+KSGM     VG +L+DMYSKCGM+EEAEKIH R  ++                 
Sbjct: 505 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXXXXXXXXXXX 564

Query: 241 ----MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGK 300
                VSWN+IISG+ ++++SED+Q  F+ M+EMG+ PD FTYATVLDTCANLA+ GLGK
Sbjct: 565 XXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 624

Query: 301 QIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHG 360
           QIHAQ+IK EL SDVYI STLVDMYSKCG++HDS LMF K+ +RD VTWNAMICG+A+HG
Sbjct: 625 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 684

Query: 361 LGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHY 420
            GEEA++LFE M+ ENIKPNH TF+S+LRAC+H+G   KGL YF  M   Y L+PQL HY
Sbjct: 685 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 744

Query: 421 SCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI-QGNVEVAEKAASSLLKLD 480
           S MVDILG+SG+V+ AL LI++MPFEAD +IWRTLL +C I + NVEVAE+A ++LL+LD
Sbjct: 745 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 804

Query: 481 PEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAH 540
           P+DSSAYTLLSN+YADAGMW++VS +R+ MR   LKKEPGCSW+E+KDE+H FLV DKAH
Sbjct: 805 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAH 864

Query: 541 PKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEE 556
           P+ E IY  L L+  +M+    +  +  ++VEE ++
Sbjct: 865 PRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899

[Close]

BLAST of CsaV3_7G008820 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 406.4 bits (1043), Expect = 3.0e-113
Identity = 204/548 (37.23%), Postives = 325/548 (59.31%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC  +++A K+F  +P+ +L S+N ++ GY++N     A ++   + + +     ++
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           +   L A + ++  S G ++HG A++S   S + ++ A++DMY KCG+L  A  LFD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
            R+ VSWN++I A  QNE+  + +  F  ML   ++P + +    L ACA       G  
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           +H   ++ G+   + V ++L+ MY KC  ++ A  +  +L+ +T+VSWNA+I GF+   +
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
             D+  +FS M    V+PD FTY +V+   A L+     K IH  +++  L  +V++T+ 
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMY+KCG +  + L+F    +R   TWNAMI G+  HG G+ ALELFE M    IKPN
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
             TF+SV+ ACSH G  + GL  F  M   Y++E  ++HY  MVD+LGR+G++ EA   I
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
             MP +    ++  +L  C+I  NV  AEKAA  L +L+P+D   + LL+NIY  A MW+
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           +V ++R +M    L+K PGCS +E+K+EVH+F     AHP  + IY+ L+ LIC ++ +G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718

Query: 541 CAPEIDTI 549
             P+ + +
Sbjct: 719 YVPDTNLV 726

[Close]

BLAST of CsaV3_7G008820 vs. TAIR10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 401.4 bits (1030), Expect = 9.5e-112
Identity = 215/560 (38.39%), Postives = 329/560 (58.75%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MY K      A  +F  + + +L S+N++I G A+N    +A  LF+QL +     D+ +
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 61  LSGALSAAAVI-KGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM 120
           ++  L AA+ + +G S   Q+H  AIK N  S+  V+ A++D Y +   + EA  LF+  
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478

Query: 121 EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 180
              D V+WNA++    Q+    KTL  F  M +     D+FT  +V K C    A + G 
Sbjct: 479 NF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 538

Query: 181 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQK 240
           +VH   IKSG  L ++V S ++DMY KCG M  A+     +     V+W  +ISG     
Sbjct: 539 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 598

Query: 241 KSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITS 300
           + E +   FS M  MGV PD FT AT+    + L  +  G+QIHA  +KL   +D ++ +
Sbjct: 599 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 658

Query: 301 TLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKP 360
           +LVDMY+KCG++ D+  +F++    +   WNAM+ G A HG G+E L+LF+ M    IKP
Sbjct: 659 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 718

Query: 361 NHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRL 420
           +  TF+ VL ACSH G   +   + + M   Y ++P++EHYSC+ D LGR+G V++A  L
Sbjct: 719 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 778

Query: 421 IQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMW 480
           I+ M  EA A ++RTLL+ C++QG+ E  ++ A+ LL+L+P DSSAY LLSN+YA A  W
Sbjct: 779 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 838

Query: 481 QQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRS 540
            ++   R  M+ H +KK+PG SWIEVK+++H F+V D+++ + E+IY  +  +I D+++ 
Sbjct: 839 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE 898

Query: 541 GCAPEID--TIQVEEVEENR 558
           G  PE D   + VEE E+ R
Sbjct: 899 GYVPETDFTLVDVEEEEKER 917

[Close]

BLAST of CsaV3_7G008820 vs. TAIR10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 389.8 bits (1000), Expect = 2.9e-108
Identity = 203/562 (36.12%), Postives = 325/562 (57.83%), Query Frame = 0


Query: 1   MYAKCDN-MSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEV 60
           M+ K +N   +AYK+F  + + N+ ++  MI    +     +A + FL +  + F  D+ 
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 61  SLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC---GALVEASGLF 120
           +LS   SA A ++  S G QLH  AI+S L  +  V  +++DMY KC   G++ +   +F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 330

Query: 121 DEMEIRDPVSWNAIITACEQN-ESEGKTLSHFGAML-RSKMEPDEFTYGSVLKACAGQRA 180
           D ME    +SW A+IT   +N     + ++ F  M+ +  +EP+ FT+ S  KAC     
Sbjct: 331 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 390

Query: 181 FSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISG 240
              G +V G+  K G+     V ++++ M+ K   ME+A++    L E+ +VS+N  + G
Sbjct: 391 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 450

Query: 241 FSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSD 300
                  E + +  S + E  +    FT+A++L   AN+ ++  G+QIH+Q++KL L  +
Sbjct: 451 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 510

Query: 301 VYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLH 360
             + + L+ MYSKCG++  +  +F     R+ ++W +MI GFA HG     LE F  M+ 
Sbjct: 511 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 570

Query: 361 ENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVE 420
           E +KPN  T+V++L ACSHVG   +G  +F  M   + ++P++EHY+CMVD+L R+G + 
Sbjct: 571 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 630

Query: 421 EALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYA 480
           +A   I  MPF+AD ++WRT L  C++  N E+ + AA  +L+LDP + +AY  LSNIYA
Sbjct: 631 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 690

Query: 481 DAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLIC 540
            AG W++ +++R+ M+  NL KE GCSWIEV D++H F V D AHP    IY  LD LI 
Sbjct: 691 CAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLIT 750

Query: 541 DMRRSGCAPEIDTIQVEEVEEN 557
           +++R G  P+ D +  +  EEN
Sbjct: 751 EIKRCGYVPDTDLVLHKLEEEN 770

[Close]

BLAST of CsaV3_7G008820 vs. TAIR10
Match: AT5G09950.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 388.3 bits (996), Expect = 8.3e-108
Identity = 210/564 (37.23%), Postives = 333/564 (59.04%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC +++DA ++F  + D +  S+N+MI G  +N    +A + +  ++++       +
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           L  +LS+ A +K    G Q+HG ++K  +  N+ V+NA++ +Y + G L E   +F  M 
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477

Query: 121 IRDPVSWNAIITACEQNE-SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 180
             D VSWN+II A  ++E S  + +  F    R+  + +  T+ SVL A +       G 
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537

Query: 181 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQ 240
           ++HG  +K+ +  +    +AL+  Y KCG M+  EKI  R+ E +  V+WN++ISG+   
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597

Query: 241 KKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYIT 300
           +    +      ML+ G   D+F YATVL   A++AT+  G ++HA  ++  L SDV + 
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657

Query: 301 STLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHM-LHENI 360
           S LVDMYSKCG +  +L  F   P R+S +WN+MI G+A HG GEEAL+LFE M L    
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717

Query: 361 KPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEAL 420
            P+H TFV VL ACSH G  ++G  +F+ M+  Y L P++EH+SCM D+LGR+G++++  
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777

Query: 421 RLIQDMPFEADAIIWRTLL-SICKIQG-NVEVAEKAASSLLKLDPEDSSAYTLLSNIYAD 480
             I+ MP + + +IWRT+L + C+  G   E+ +KAA  L +L+PE++  Y LL N+YA 
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837

Query: 481 AGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICD 540
            G W+ + K R+ M+  ++KKE G SW+ +KD VH F+  DK+HP  ++IY  L  L   
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRK 897

Query: 541 MRRSGCAPEIDTIQVEEVEENRHQ 560
           MR +G  P+      +  +EN+ +
Sbjct: 898 MRDAGYVPQTGFALYDLEQENKEE 921

[Close]

BLAST of CsaV3_7G008820 vs. Swiss-Prot
Match: sp|Q9FWA6|PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 694.5 bits (1791), Expect = 9.8e-199
Identity = 346/576 (60.07%), Postives = 433/576 (75.17%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNM DA  LF    + N QSYNAMI GY++ E GF+A  LF +L  +   FDE+S
Sbjct: 325 MYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS 384

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSG   A A++KG SEGLQ++GLAIKS+LS ++CVANA +DMYGKC AL EA  +FDEM 
Sbjct: 385 LSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR 444

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
            RD VSWNAII A EQN    +TL  F +MLRS++EPDEFT+GS+LKAC G  +   GME
Sbjct: 445 RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGME 504

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT---------------- 240
           +H  I+KSGM     VG +L+DMYSKCGM+EEAEKIH R  ++                 
Sbjct: 505 IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVXXXXXXXXXXXXXX 564

Query: 241 ----MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGK 300
                VSWN+IISG+ ++++SED+Q  F+ M+EMG+ PD FTYATVLDTCANLA+ GLGK
Sbjct: 565 XXXXXVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGK 624

Query: 301 QIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHG 360
           QIHAQ+IK EL SDVYI STLVDMYSKCG++HDS LMF K+ +RD VTWNAMICG+A+HG
Sbjct: 625 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 684

Query: 361 LGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHY 420
            GEEA++LFE M+ ENIKPNH TF+S+LRAC+H+G   KGL YF  M   Y L+PQL HY
Sbjct: 685 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 744

Query: 421 SCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI-QGNVEVAEKAASSLLKLD 480
           S MVDILG+SG+V+ AL LI++MPFEAD +IWRTLL +C I + NVEVAE+A ++LL+LD
Sbjct: 745 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 804

Query: 481 PEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAH 540
           P+DSSAYTLLSN+YADAGMW++VS +R+ MR   LKKEPGCSW+E+KDE+H FLV DKAH
Sbjct: 805 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAH 864

Query: 541 PKCEMIYSLLDLLICDMRRSGCAPEIDTIQVEEVEE 556
           P+ E IY  L L+  +M+    +  +  ++VEE ++
Sbjct: 865 PRWEEIYEELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899

[Close]

BLAST of CsaV3_7G008820 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 5.3e-112
Identity = 204/548 (37.23%), Postives = 325/548 (59.31%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC  +++A K+F  +P+ +L S+N ++ GY++N     A ++   + + +     ++
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           +   L A + ++  S G ++HG A++S   S + ++ A++DMY KCG+L  A  LFD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
            R+ VSWN++I A  QNE+  + +  F  ML   ++P + +    L ACA       G  
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           +H   ++ G+   + V ++L+ MY KC  ++ A  +  +L+ +T+VSWNA+I GF+   +
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
             D+  +FS M    V+PD FTY +V+   A L+     K IH  +++  L  +V++T+ 
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMY+KCG +  + L+F    +R   TWNAMI G+  HG G+ ALELFE M    IKPN
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
             TF+SV+ ACSH G  + GL  F  M   Y++E  ++HY  MVD+LGR+G++ EA   I
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
             MP +    ++  +L  C+I  NV  AEKAA  L +L+P+D   + LL+NIY  A MW+
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           +V ++R +M    L+K PGCS +E+K+EVH+F     AHP  + IY+ L+ LIC ++ +G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718

Query: 541 CAPEIDTI 549
             P+ + +
Sbjct: 719 YVPDTNLV 726

[Close]

BLAST of CsaV3_7G008820 vs. Swiss-Prot
Match: sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.7e-110
Identity = 215/560 (38.39%), Postives = 329/560 (58.75%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MY K      A  +F  + + +L S+N++I G A+N    +A  LF+QL +     D+ +
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 61  LSGALSAAAVI-KGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEM 120
           ++  L AA+ + +G S   Q+H  AIK N  S+  V+ A++D Y +   + EA  LF+  
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERH 478

Query: 121 EIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 180
              D V+WNA++    Q+    KTL  F  M +     D+FT  +V K C    A + G 
Sbjct: 479 NF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 538

Query: 181 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQK 240
           +VH   IKSG  L ++V S ++DMY KCG M  A+     +     V+W  +ISG     
Sbjct: 539 QVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENG 598

Query: 241 KSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITS 300
           + E +   FS M  MGV PD FT AT+    + L  +  G+QIHA  +KL   +D ++ +
Sbjct: 599 EEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGT 658

Query: 301 TLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKP 360
           +LVDMY+KCG++ D+  +F++    +   WNAM+ G A HG G+E L+LF+ M    IKP
Sbjct: 659 SLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKP 718

Query: 361 NHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRL 420
           +  TF+ VL ACSH G   +   + + M   Y ++P++EHYSC+ D LGR+G V++A  L
Sbjct: 719 DKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 778

Query: 421 IQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMW 480
           I+ M  EA A ++RTLL+ C++QG+ E  ++ A+ LL+L+P DSSAY LLSN+YA A  W
Sbjct: 779 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 838

Query: 481 QQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRS 540
            ++   R  M+ H +KK+PG SWIEVK+++H F+V D+++ + E+IY  +  +I D+++ 
Sbjct: 839 DEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQE 898

Query: 541 GCAPEID--TIQVEEVEENR 558
           G  PE D   + VEE E+ R
Sbjct: 899 GYVPETDFTLVDVEEEEKER 917

[Close]

BLAST of CsaV3_7G008820 vs. Swiss-Prot
Match: sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 5.2e-107
Identity = 203/562 (36.12%), Postives = 325/562 (57.83%), Query Frame = 0


Query: 1   MYAKCDN-MSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEV 60
           M+ K +N   +AYK+F  + + N+ ++  MI    +     +A + FL +  + F  D+ 
Sbjct: 211 MFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKF 270

Query: 61  SLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC---GALVEASGLF 120
           +LS   SA A ++  S G QLH  AI+S L  +  V  +++DMY KC   G++ +   +F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVF 330

Query: 121 DEMEIRDPVSWNAIITACEQN-ESEGKTLSHFGAML-RSKMEPDEFTYGSVLKACAGQRA 180
           D ME    +SW A+IT   +N     + ++ F  M+ +  +EP+ FT+ S  KAC     
Sbjct: 331 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 390

Query: 181 FSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISG 240
              G +V G+  K G+     V ++++ M+ K   ME+A++    L E+ +VS+N  + G
Sbjct: 391 PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDG 450

Query: 241 FSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSD 300
                  E + +  S + E  +    FT+A++L   AN+ ++  G+QIH+Q++KL L  +
Sbjct: 451 TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCN 510

Query: 301 VYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLH 360
             + + L+ MYSKCG++  +  +F     R+ ++W +MI GFA HG     LE F  M+ 
Sbjct: 511 QPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIE 570

Query: 361 ENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVE 420
           E +KPN  T+V++L ACSHVG   +G  +F  M   + ++P++EHY+CMVD+L R+G + 
Sbjct: 571 EGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 630

Query: 421 EALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYA 480
           +A   I  MPF+AD ++WRT L  C++  N E+ + AA  +L+LDP + +AY  LSNIYA
Sbjct: 631 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 690

Query: 481 DAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLIC 540
            AG W++ +++R+ M+  NL KE GCSWIEV D++H F V D AHP    IY  LD LI 
Sbjct: 691 CAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLIT 750

Query: 541 DMRRSGCAPEIDTIQVEEVEEN 557
           +++R G  P+ D +  +  EEN
Sbjct: 751 EIKRCGYVPDTDLVLHKLEEEN 770

[Close]

BLAST of CsaV3_7G008820 vs. Swiss-Prot
Match: sp|Q9FIB2|PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 1.5e-106
Identity = 210/564 (37.23%), Postives = 333/564 (59.04%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC +++DA ++F  + D +  S+N+MI G  +N    +A + +  ++++       +
Sbjct: 358 MYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFT 417

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           L  +LS+ A +K    G Q+HG ++K  +  N+ V+NA++ +Y + G L E   +F  M 
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477

Query: 121 IRDPVSWNAIITACEQNE-SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGM 180
             D VSWN+II A  ++E S  + +  F    R+  + +  T+ SVL A +       G 
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537

Query: 181 EVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQ 240
           ++HG  +K+ +  +    +AL+  Y KCG M+  EKI  R+ E +  V+WN++ISG+   
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597

Query: 241 KKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYIT 300
           +    +      ML+ G   D+F YATVL   A++AT+  G ++HA  ++  L SDV + 
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657

Query: 301 STLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHM-LHENI 360
           S LVDMYSKCG +  +L  F   P R+S +WN+MI G+A HG GEEAL+LFE M L    
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717

Query: 361 KPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEAL 420
            P+H TFV VL ACSH G  ++G  +F+ M+  Y L P++EH+SCM D+LGR+G++++  
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777

Query: 421 RLIQDMPFEADAIIWRTLL-SICKIQG-NVEVAEKAASSLLKLDPEDSSAYTLLSNIYAD 480
             I+ MP + + +IWRT+L + C+  G   E+ +KAA  L +L+PE++  Y LL N+YA 
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAA 837

Query: 481 AGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICD 540
            G W+ + K R+ M+  ++KKE G SW+ +KD VH F+  DK+HP  ++IY  L  L   
Sbjct: 838 GGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRK 897

Query: 541 MRRSGCAPEIDTIQVEEVEENRHQ 560
           MR +G  P+      +  +EN+ +
Sbjct: 898 MRDAGYVPQTGFALYDLEQENKEE 921

[Close]

BLAST of CsaV3_7G008820 vs. TrEMBL
Match: tr|A0A0A0K395|A0A0A0K395_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074860 PE=4 SV=1)

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 567/567 (100.00%), Postives = 567/567 (100.00%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS
Sbjct: 302 MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 361

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME
Sbjct: 362 LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 421

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME
Sbjct: 422 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 481

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 482 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 541

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST
Sbjct: 542 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 601

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN
Sbjct: 602 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 661

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI
Sbjct: 662 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 721

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ
Sbjct: 722 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 781

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 782 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 841

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 842 CAPEIDTIQVEEVEENRHQKVKSNGFS 868

[Close]

BLAST of CsaV3_7G008820 vs. TrEMBL
Match: tr|A0A1S4E0B3|A0A1S4E0B3_CUCME (pentatricopeptide repeat-containing protein At3g02330 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495214 PE=4 SV=1)

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 550/567 (97.00%), Postives = 558/567 (98.41%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC NMSDAYKLFSLLPDHNLQSYNAMII YARNEQG QAFKLFLQLQKNSFSFDE+S
Sbjct: 281 MYAKCHNMSDAYKLFSLLPDHNLQSYNAMIIAYARNEQGIQAFKLFLQLQKNSFSFDEIS 340

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEG+QLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS LFDEME
Sbjct: 341 LSGALSAAAVIKGHSEGIQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASCLFDEME 400

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRD VSWNAIITACEQNE++ KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ+AFSNGME
Sbjct: 401 IRDAVSWNAIITACEQNENDRKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQQAFSNGME 460

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMY KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 461 VHGRIIKSGMGLKMFVGSALVDMYCKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 520

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ+IKLELLSDVYITST
Sbjct: 521 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQIIKLELLSDVYITST 580

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG AYHGLGEEALELFEHMLHENIKPN
Sbjct: 581 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGCAYHGLGEEALELFEHMLHENIKPN 640

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQV EALRLI
Sbjct: 641 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVGEALRLI 700

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS+AYTLLSNIYADAGMWQ
Sbjct: 701 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSAAYTLLSNIYADAGMWQ 760

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC+KAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 761 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCEKAHPKCEMIYSLLDLLICDMRRSG 820

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 821 CAPEIDTIQVEEVEENRHQKVKSNGFS 847

[Close]

BLAST of CsaV3_7G008820 vs. TrEMBL
Match: tr|A0A1S3BZM9|A0A1S3BZM9_CUCME (pentatricopeptide repeat-containing protein At3g02330 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495214 PE=4 SV=1)

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 550/567 (97.00%), Postives = 558/567 (98.41%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC NMSDAYKLFSLLPDHNLQSYNAMII YARNEQG QAFKLFLQLQKNSFSFDE+S
Sbjct: 320 MYAKCHNMSDAYKLFSLLPDHNLQSYNAMIIAYARNEQGIQAFKLFLQLQKNSFSFDEIS 379

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEG+QLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS LFDEME
Sbjct: 380 LSGALSAAAVIKGHSEGIQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASCLFDEME 439

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRD VSWNAIITACEQNE++ KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ+AFSNGME
Sbjct: 440 IRDAVSWNAIITACEQNENDRKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQQAFSNGME 499

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMY KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 500 VHGRIIKSGMGLKMFVGSALVDMYCKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 559

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ+IKLELLSDVYITST
Sbjct: 560 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQIIKLELLSDVYITST 619

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG AYHGLGEEALELFEHMLHENIKPN
Sbjct: 620 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGCAYHGLGEEALELFEHMLHENIKPN 679

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQV EALRLI
Sbjct: 680 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVGEALRLI 739

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS+AYTLLSNIYADAGMWQ
Sbjct: 740 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSAAYTLLSNIYADAGMWQ 799

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC+KAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 800 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCEKAHPKCEMIYSLLDLLICDMRRSG 859

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 860 CAPEIDTIQVEEVEENRHQKVKSNGFS 886

[Close]

BLAST of CsaV3_7G008820 vs. TrEMBL
Match: tr|A0A1S3C0E6|A0A1S3C0E6_CUCME (pentatricopeptide repeat-containing protein At3g02330 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495214 PE=4 SV=1)

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 550/567 (97.00%), Postives = 558/567 (98.41%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC NMSDAYKLFSLLPDHNLQSYNAMII YARNEQG QAFKLFLQLQKNSFSFDE+S
Sbjct: 218 MYAKCHNMSDAYKLFSLLPDHNLQSYNAMIIAYARNEQGIQAFKLFLQLQKNSFSFDEIS 277

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEG+QLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS LFDEME
Sbjct: 278 LSGALSAAAVIKGHSEGIQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASCLFDEME 337

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRD VSWNAIITACEQNE++ KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ+AFSNGME
Sbjct: 338 IRDAVSWNAIITACEQNENDRKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQQAFSNGME 397

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMY KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 398 VHGRIIKSGMGLKMFVGSALVDMYCKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 457

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ+IKLELLSDVYITST
Sbjct: 458 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQIIKLELLSDVYITST 517

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG AYHGLGEEALELFEHMLHENIKPN
Sbjct: 518 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGCAYHGLGEEALELFEHMLHENIKPN 577

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQV EALRLI
Sbjct: 578 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVGEALRLI 637

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS+AYTLLSNIYADAGMWQ
Sbjct: 638 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSAAYTLLSNIYADAGMWQ 697

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC+KAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 698 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCEKAHPKCEMIYSLLDLLICDMRRSG 757

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 758 CAPEIDTIQVEEVEENRHQKVKSNGFS 784

[Close]

BLAST of CsaV3_7G008820 vs. TrEMBL
Match: tr|A0A1S3C0V9|A0A1S3C0V9_CUCME (pentatricopeptide repeat-containing protein At3g02330 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103495214 PE=4 SV=1)

HSP 1 Score: 1110.5 bits (2871), Expect = 0.0e+00
Identity = 550/567 (97.00%), Postives = 558/567 (98.41%), Query Frame = 0


Query: 1   MYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVS 60
           MYAKC NMSDAYKLFSLLPDHNLQSYNAMII YARNEQG QAFKLFLQLQKNSFSFDE+S
Sbjct: 143 MYAKCHNMSDAYKLFSLLPDHNLQSYNAMIIAYARNEQGIQAFKLFLQLQKNSFSFDEIS 202

Query: 61  LSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEME 120
           LSGALSAAAVIKGHSEG+QLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS LFDEME
Sbjct: 203 LSGALSAAAVIKGHSEGIQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASCLFDEME 262

Query: 121 IRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGME 180
           IRD VSWNAIITACEQNE++ KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQ+AFSNGME
Sbjct: 263 IRDAVSWNAIITACEQNENDRKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQQAFSNGME 322

Query: 181 VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 240
           VHGRIIKSGMGLKMFVGSALVDMY KCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK
Sbjct: 323 VHGRIIKSGMGLKMFVGSALVDMYCKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKK 382

Query: 241 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITST 300
           SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQ+IKLELLSDVYITST
Sbjct: 383 SEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQIIKLELLSDVYITST 442

Query: 301 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPN 360
           LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICG AYHGLGEEALELFEHMLHENIKPN
Sbjct: 443 LVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGCAYHGLGEEALELFEHMLHENIKPN 502

Query: 361 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLI 420
           HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQV EALRLI
Sbjct: 503 HATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVGEALRLI 562

Query: 421 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQ 480
           QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDS+AYTLLSNIYADAGMWQ
Sbjct: 563 QDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSAAYTLLSNIYADAGMWQ 622

Query: 481 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSG 540
           QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVC+KAHPKCEMIYSLLDLLICDMRRSG
Sbjct: 623 QVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCEKAHPKCEMIYSLLDLLICDMRRSG 682

Query: 541 CAPEIDTIQVEEVEENRHQKVKSNGFS 568
           CAPEIDTIQVEEVEENRHQKVKSNGFS
Sbjct: 683 CAPEIDTIQVEEVEENRHQKVKSNGFS 709

The following BLAST results are available for this feature:

BLAST of CsaV3_7G008820 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43953.1	0.0e+00	100.00	hypothetical protein Csa_7G074860 [Cucumis sativus]	[more]
XP_004137118.2	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X1 [Cuc...	[more]
XP_011658917.1	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X2 [Cuc...	[more]
XP_011658918.1	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X3 [Cuc...	[more]
XP_008454910.1	0.0e+00	97.00	PREDICTED: pentatricopeptide repeat-containing protein At3g02330 isoform X1 [Cuc...	[more]

BLAST of CsaV3_7G008820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02330.1	5.4e-200	60.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	3.0e-113	37.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33170.1	9.5e-112	38.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49170.1	2.9e-108	36.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G09950.1	8.3e-108	37.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsaV3_7G008820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FWA6\|PP207_ARATH	9.8e-199	60.07	Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidop...	[more]
sp\|Q3E6Q1\|PPR32_ARATH	5.3e-112	37.23	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
sp\|Q9SMZ2\|PP347_ARATH	1.7e-110	38.39	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]
sp\|Q5G1T1\|PP272_ARATH	5.2e-107	36.12	Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop...	[more]
sp\|Q9FIB2\|PP373_ARATH	1.5e-106	37.23	Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis th...	[more]

BLAST of CsaV3_7G008820 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K395\|A0A0A0K395_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074860 PE=4 SV=1	[more]
tr\|A0A1S4E0B3\|A0A1S4E0B3_CUCME	0.0e+00	97.00	pentatricopeptide repeat-containing protein At3g02330 isoform X2 OS=Cucumis melo...	[more]
tr\|A0A1S3BZM9\|A0A1S3BZM9_CUCME	0.0e+00	97.00	pentatricopeptide repeat-containing protein At3g02330 isoform X1 OS=Cucumis melo...	[more]
tr\|A0A1S3C0E6\|A0A1S3C0E6_CUCME	0.0e+00	97.00	pentatricopeptide repeat-containing protein At3g02330 isoform X3 OS=Cucumis melo...	[more]
tr\|A0A1S3C0V9\|A0A1S3C0V9_CUCME	0.0e+00	97.00	pentatricopeptide repeat-containing protein At3g02330 isoform X4 OS=Cucumis melo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR032867	DYW_dom
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G008820.1	CsaV3_7G008820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 41..172 e-value: 9.7E-23 score: 83.0 coord: 277..391 e-value: 4.7E-27 score: 97.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 392..527 e-value: 6.0E-14 score: 54.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 173..276 e-value: 1.7E-18 score: 68.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 435..481 coord: 307..349
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 198..222 e-value: 0.0062 score: 16.6 coord: 299..321 e-value: 0.53 score: 10.5 coord: 25..53 e-value: 3.1E-4 score: 20.7 coord: 399..423 e-value: 6.4E-4 score: 19.7 coord: 97..120 e-value: 0.0047 score: 17.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 225..271 e-value: 8.4E-11 score: 41.8 coord: 325..372 e-value: 4.6E-13 score: 49.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 400..423 e-value: 3.8E-4 score: 18.4 coord: 327..360 e-value: 2.4E-8 score: 31.6 coord: 25..57 e-value: 7.8E-4 score: 17.5 coord: 226..259 e-value: 2.2E-4 score: 19.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 12.693
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 224..258 score: 10.764
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..223 score: 7.213
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 462..496 score: 8.232
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 259..293 score: 6.752
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 123..157 score: 8.473
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 428..458 score: 5.294
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 360..390 score: 6.533
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 22..56 score: 8.594
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 158..192 score: 8.32
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 508..543 score: 5.327
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 396..426 score: 8.013
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 294..324 score: 7.202
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 92..122 score: 7.574
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 498..559 e-value: 1.7E-6 score: 27.8
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 147..212 coord: 219..531 coord: 65..141
None	No IPR available	PANTHER	PTHR24015:SF52	GLYCOSYLTRANSFERASE	coord: 147..212 coord: 65..141
None	No IPR available	PANTHER	PTHR24015:SF52	GLYCOSYLTRANSFERASE	coord: 219..531

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G008820	CSPI07G07840	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G008820	Cucsa.220070	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G008820	CsGy7G007390	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G008820	MELO3C018431	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G008820	ClCG02G005700	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G008820	Lsi11G010280	Bottle gourd (USVL1VR-Ls)	cuclsiB530
CsaV3_7G008820	MELO3C018431.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G008820	Cla97C02G032670	Watermelon (97103) v2	cucwmbB550
CsaV3_7G008820	Bhi05G001012	Wax gourd	cucwgoB688

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G008820	Cucumber (Chinese Long) v3	cuccucB216
CsaV3_7G008820	Silver-seed gourd	carcucB0237
CsaV3_7G008820	Silver-seed gourd	carcucB0852
CsaV3_7G008820	Cucumber (Gy14) v2	cgybcucB098
CsaV3_7G008820	Cucumber (Gy14) v2	cgybcucB308
CsaV3_7G008820	Cucumber (Gy14) v1	cgycucB127
CsaV3_7G008820	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G008820	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G008820	Cucurbita maxima (Rimu)	cmacucB1039
CsaV3_7G008820	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G008820	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G008820	Cucurbita moschata (Rifu)	cmocucB1023
CsaV3_7G008820	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G008820	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G008820	Wild cucumber (PI 183967)	cpicucB122
CsaV3_7G008820	Wild cucumber (PI 183967)	cpicucB378
CsaV3_7G008820	Bottle gourd (USVL1VR-Ls)	cuclsiB536
CsaV3_7G008820	Melon (DHL92) v3.5.1	cucmeB587
CsaV3_7G008820	Melon (DHL92) v3.6.1	cucmedB575
CsaV3_7G008820	Watermelon (Charleston Gray)	cucwcgB563
CsaV3_7G008820	Watermelon (97103) v1	cucwmB625
CsaV3_7G008820	Watermelon (97103) v1	cucwmB635
CsaV3_7G008820	Watermelon (97103) v2	cucwmbB535
CsaV3_7G008820	Wax gourd	cucwgoB710