CsaV3_7G008570 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATAGTGATCAATTGATTTAAATTCTATTATAATCTTAGAATTTTTGAGTTTATTTCAAAATATGAACAAATGATGTCATGTATTTACAAAATTTACTAATGGACTTATCAAACATTTTAATTATGTATTTGTACTGAGATGTTTAAGTACCTAAGTTTTTCTTTTTTCAAATGAAATGGAGAAACTGTAAACTGCACTTCCCAATTTTTCGTCTCTCCCCTCATGGCTCGCAGATTCTTCAGCACTTCTCTTTCCCTTTCCCGCTCTTTAACTCGCCACACAAAGTTTCCCAATCCCATTCCTTTTCCTAATTTAATCAAACCCATTCAATCATTCCATCTAACCCCACCATTTTTCTCTTCCGTTTCTCAAATCGGCGATGCCCTTTCCCCCACCATTCAGCCGCCCGACGAAGATAACCGATCGGAATTGCTTCGCTCCCTTGAAGTTTTGCTTGGTTCTTCGTTTCGCTCCGACCGTTTGGTCTACAATCAAAGCCCTTTAGTTATTGTGCTCAGTGGCCCACCTGGGGTCGGAAACGATGCTGTGATTAAGCGATTGAGAGAAGTCCGAGAAGGCCTCCATTTCGCTGTCACAGCGACGACTCGTCCAATGCGACCTGGTGAAGTCGATGGAAAAGATTGTTATTTCATCTCCAAAGAAGAGTTTTCTGCTATGATGAAGAGGAACGAGCTTCTGGAATTTTCGTTTATGTATGGACATTACAAGGGGATTCCCAAAACGCAAATTCGTGAGTTTATGGAAAAAGGGTATGATATTGTTTTGAGAGTTGAAATTTCAAGAGCTAAAATATTGAGGAAGATTCTTCGAAATTCTGCTGTTTTTGTGTTTTTGATGGCGGAGAGTGAGGCTAAATTAGGGGAGAGGTCGATTGATAGGAAGACAGGGACTGAAGAATCATTGTTGGTGAGACTTCCATGGGTTAGAGAGAATGTTAAGAATTTTGATTACGTGGTTGTGAATACAGATGGGAAGTTGGAGAGTGCAGTTAAGCTTGTGGAATCCATTATTGATGCTGAGAAGGCAAAGGTCCGGCAGAGAAGGACTGTTGTTTAGATTCAGACTGTTGTTTAGATTCAGCTTGTGAGACATCATTTTGCAAGGTAACTTTTGTTTTATAGTTCTATTGCGAGATGGGTTTCTTTCTTAGGACAGTTTTACTGTTAGTGATGGAGAAGGAACAACAGAATCATACCTTACCTACTCTGTTTGAAACTCCAGCTTCCTCTATGCAAGTATTTATCGCTTTTATTTGTTTGATAGTAGTATAGTTTTGCCTGAAACTTGCATAGTTTTTGTTTTGGATTCTATTTCAAATGCCTGGTAATGGTGATAACTGGAGAAGTTTCACTATTCATGTCAACATTTAGCTTAATAGTATTGAGTCTTATTGTATAAAAAAACCAACTTTTGATTTCTTGGAGATTTCATCAGCCATAATGGTCGGCCTTTTTATACTCTCTTTGGTGATATTCTTCATAATCTCCAATGGTTTCTCATGATTGTCATATCACGCTTCGATGGAGAACGTTATGTTATTAGATGGTTGAATTTTCAGGTTGCTTCTTATTAAAGGACACTCTCCCTCCCCCGATTAGAATTCAGATTTGATTTTAAGAGATAACTGGTGTGAGATAGAAGGACAACTCTCCCAAGAATCGAAACTCAAACCTTATTGTTAGTCAGGAAACTAAGAAGGATTAGCCAGGGAATTATTCAATTTCCCAAGTCAAGGATAACTACTGTATGACATCATTAACAGGAGGTCTATTGATATGCAAATGTAAGGAAACGATCATCGAGTATGATTGAACCTAGAATCTCTAATGGAGTGTTAGTGGGTCGGTTAATCTTTTTTTTTCTCGTCAAAACTGGCTTTATACCAACCTACTGATACAAGAAAAATGTGAAAATCAACATTGAAACCAGCATTCTAGATAACCAATGCCAACCGAATAGACTATACCAGCCCCTAAATTACTTTTTGTATTTCGAGTTTCATGAAACTGAACCAACGGACATGTATTGCTCAAATCAATTGACTAGCGAGATCATTCAGTTTTTCTGATTTCAGCTAGTTCTTCTACTTTTAGCTTTAATGCTATGCTCTGGTTATCACTAGACCAGAAAACTTGGAGTGCTAACCTTTTTTCTTTCTTTTTTTAAAACAGAAAGAAACCCTTTTGTTGATGAAATGAGGCTAATACTCAAAATACAATAACACAAAATAGAGCCAAAATACAGAAACATAGAAATTTGGAATCATAGCAAGATATCTCAACTAGGTTGACACAGCTGCTCATGGGAGTGATGATTGAAAAGATAGAAGTGAATTTTGGTGTTATATGGACGGATTAATGGAGATTATGTTGAAGAACTGGGAAAGACCCACAAAAAGAGATGTGTTGTGAAACCAAATAGTCTTTTTTATGTTGTATGAAATATTCTGCACTCAAATGTGAGAAGAGATTTTATTTATAGGAAAAATATACTAGTAGTTGGTTACTAAAGGTAGTTTTAGCTAGCTAACAAGGAATTAAAGCATAACCGTAATTGTGAAAATATAAAGAAACTAGAAATCAATAGGTTTAAGCTATTTGATTTACATCAAGATGAGACTTATTGATATATATTGATCTAAGAGCCTTTGCAGTCTTTCTTCCAGGGCTTGTCA ATGGCTCGCAGATTCTTCAGCACTTCTCTTTCCCTTTCCCGCTCTTTAACTCGCCACACAAAGTTTCCCAATCCCATTCCTTTTCCTAATTTAATCAAACCCATTCAATCATTCCATCTAACCCCACCATTTTTCTCTTCCGTTTCTCAAATCGGCGATGCCCTTTCCCCCACCATTCAGCCGCCCGACGAAGATAACCGATCGGAATTGCTTCGCTCCCTTGAAGTTTTGCTTGGTTCTTCGTTTCGCTCCGACCGTTTGGTCTACAATCAAAGCCCTTTAGTTATTGTGCTCAGTGGCCCACCTGGGGTCGGAAACGATGCTGTGATTAAGCGATTGAGAGAAGTCCGAGAAGGCCTCCATTTCGCTGTCACAGCGACGACTCGTCCAATGCGACCTGGTGAAGTCGATGGAAAAGATTGTTATTTCATCTCCAAAGAAGAGTTTTCTGCTATGATGAAGAGGAACGAGCTTCTGGAATTTTCGTTTATGTATGGACATTACAAGGGGATTCCCAAAACGCAAATTCGTGAGTTTATGGAAAAAGGGTATGATATTGTTTTGAGAGTTGAAATTTCAAGAGCTAAAATATTGAGGAAGATTCTTCGAAATTCTGCTGTTTTTGTGTTTTTGATGGCGGAGAGTGAGGCTAAATTAGGGGAGAGGTCGATTGATAGGAAGACAGGGACTGAAGAATCATTGTTGGTGAGACTTCCATGGGTTAGAGAGAATGTTAAGAATTTTGATTACGTGGTTGTGAATACAGATGGGAAGTTGGAGAGTGCAGTTAAGCTTGTGGAATCCATTATTGATGCTGAGAAGGCAAAGGTCCGGCAGAGAAGGACTGTTGTTTAG ATGGCTCGCAGATTCTTCAGCACTTCTCTTTCCCTTTCCCGCTCTTTAACTCGCCACACAAAGTTTCCCAATCCCATTCCTTTTCCTAATTTAATCAAACCCATTCAATCATTCCATCTAACCCCACCATTTTTCTCTTCCGTTTCTCAAATCGGCGATGCCCTTTCCCCCACCATTCAGCCGCCCGACGAAGATAACCGATCGGAATTGCTTCGCTCCCTTGAAGTTTTGCTTGGTTCTTCGTTTCGCTCCGACCGTTTGGTCTACAATCAAAGCCCTTTAGTTATTGTGCTCAGTGGCCCACCTGGGGTCGGAAACGATGCTGTGATTAAGCGATTGAGAGAAGTCCGAGAAGGCCTCCATTTCGCTGTCACAGCGACGACTCGTCCAATGCGACCTGGTGAAGTCGATGGAAAAGATTGTTATTTCATCTCCAAAGAAGAGTTTTCTGCTATGATGAAGAGGAACGAGCTTCTGGAATTTTCGTTTATGTATGGACATTACAAGGGGATTCCCAAAACGCAAATTCGTGAGTTTATGGAAAAAGGGTATGATATTGTTTTGAGAGTTGAAATTTCAAGAGCTAAAATATTGAGGAAGATTCTTCGAAATTCTGCTGTTTTTGTGTTTTTGATGGCGGAGAGTGAGGCTAAATTAGGGGAGAGGTCGATTGATAGGAAGACAGGGACTGAAGAATCATTGTTGGTGAGACTTCCATGGGTTAGAGAGAATGTTAAGAATTTTGATTACGTGGTTGTGAATACAGATGGGAAGTTGGAGAGTGCAGTTAAGCTTGTGGAATCCATTATTGATGCTGAGAAGGCAAAGGTCCGGCAGAGAAGGACTGTTGTTTAG MARRFFSTSLSLSRSLTRHTKFPNPIPFPNLIKPIQSFHLTPPFFSSVSQIGDALSPTIQPPDEDNRSELLRSLEVLLGSSFRSDRLVYNQSPLVIVLSGPPGVGNDAVIKRLREVREGLHFAVTATTRPMRPGEVDGKDCYFISKEEFSAMMKRNELLEFSFMYGHYKGIPKTQIREFMEKGYDIVLRVEISRAKILRKILRNSAVFVFLMAESEAKLGERSIDRKTGTEESLLVRLPWVRENVKNFDYVVVNTDGKLESAVKLVESIIDAEKAKVRQRRTVV
BLAST of CsaV3_7G008570 vs. NCBI nr
Match: XP_004136980.1 (PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis sativus] >XP_011658899.1 PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis sativus] >XP_011658900.1 PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis sativus] >KGN43928.1 hypothetical protein Csa_7G073640 [Cucumis sativus]) HSP 1 Score: 553.9 bits (1426), Expect = 3.2e-154 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. NCBI nr
Match: XP_008438733.1 (PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis melo] >XP_008438734.1 PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis melo] >XP_016899071.1 PREDICTED: guanylate kinase 3, chloroplastic-like [Cucumis melo]) HSP 1 Score: 387.1 bits (993), Expect = 5.1e-104 Identity = 215/297 (72.39%), Postives = 235/297 (79.12%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. NCBI nr
Match: XP_022979262.1 (guanylate kinase 3, chloroplastic [Cucurbita maxima]) HSP 1 Score: 368.6 bits (945), Expect = 1.9e-98 Identity = 205/292 (70.21%), Postives = 233/292 (79.79%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. NCBI nr
Match: XP_023526078.1 (guanylate kinase 3, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 368.6 bits (945), Expect = 1.9e-98 Identity = 205/292 (70.21%), Postives = 233/292 (79.79%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. NCBI nr
Match: XP_022955405.1 (guanylate kinase 2, chloroplastic/mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 364.8 bits (935), Expect = 2.7e-97 Identity = 204/292 (69.86%), Postives = 230/292 (78.77%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TAIR10
Match: AT3G06200.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein) HSP 1 Score: 271.9 bits (694), Expect = 4.4e-73 Identity = 153/275 (55.64%), Postives = 192/275 (69.82%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TAIR10
Match: AT2G41880.1 (guanylate kinase 1) HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12 Identity = 49/180 (27.22%), Postives = 91/180 (50.56%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TAIR10
Match: AT3G57550.2 (guanylate kinase) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10 Identity = 44/144 (30.56%), Postives = 71/144 (49.31%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. Swiss-Prot
Match: sp|Q94JM2|GMK3_ARATH (Guanylate kinase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GK3 PE=2 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 7.9e-72 Identity = 153/275 (55.64%), Postives = 192/275 (69.82%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. Swiss-Prot
Match: sp|Q10M74|GMK2_ORYSJ (Guanylate kinase 2, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=V2 PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.1e-68 Identity = 133/218 (61.01%), Postives = 167/218 (76.61%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. Swiss-Prot
Match: sp|Q3ZWD8|KGUA_DEHMC (Guanylate kinase OS=Dehalococcoides mccartyi (strain CBDB1) OX=255470 GN=gmk PE=3 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35 Identity = 80/193 (41.45%), Postives = 127/193 (65.80%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. Swiss-Prot
Match: sp|Q3ZAF9|KGUA_DEHM1 (Guanylate kinase OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) OX=243164 GN=gmk PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.8e-34 Identity = 80/191 (41.88%), Postives = 123/191 (64.40%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. Swiss-Prot
Match: sp|Q895Q5|KGUA_CLOTE (Guanylate kinase OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=gmk PE=3 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.4e-30 Identity = 74/187 (39.57%), Postives = 114/187 (60.96%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TrEMBL
Match: tr|A0A0A0K367|A0A0A0K367_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073640 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 2.1e-154 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TrEMBL
Match: tr|A0A1S3AWS3|A0A1S3AWS3_CUCME (guanylate kinase 3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483755 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 3.4e-104 Identity = 215/297 (72.39%), Postives = 235/297 (79.12%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TrEMBL
Match: tr|A0A0A0L5P3|A0A0A0L5P3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150130 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 6.9e-89 Identity = 186/274 (67.88%), Postives = 213/274 (77.74%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TrEMBL
Match: tr|A0A1S3AX84|A0A1S3AX84_CUCME (guanylate kinase 3, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483756 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.3e-84 Identity = 180/277 (64.98%), Postives = 208/277 (75.09%), Query Frame = 0
BLAST of CsaV3_7G008570 vs. TrEMBL
Match: tr|A0A0A0L7R5|A0A0A0L7R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150140 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.1e-83 Identity = 173/243 (71.19%), Postives = 193/243 (79.42%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |