CsaV3_7G008110 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTAAATTCATATTAAAAATGTGATTAAATCTGAAAATGTAAATGAATCTTAATTTTTAGAATCATTATATATTAAGTAACTCTTGAAGTTCGAACATCGAGTTAATATGTAGCTTAAAAATCAATATCAATTATTTGCGAATACCATCGGTTTAATATGTGTGCGTGTTAAGCTAGATAACAAAAGGGAGTAAACAAACGGTCAGCTTATTTTTATCATCCACGCGCAGAAAAAGCCAAAACACACGAGTCCTTTCGACAAACTCATCCATCATTTAACACCCAGCCCATCACCACCACCACATTCTATCATCAAAATCATGGCAACGACGACCGATACAGATCCCATCCACACAGATCCACCTCCAAACAAGCAGATCTTCATCCTCTCCGGACAAAGCAACATGGCGGGACGCGGCGGCGTCTTAAAGAAGCTCCGCCGATGGGACGGCGTGGTTCCACCCGAAGCACACCCGCACCCATCGATATTCCGGCTGAGCGCGAAGAAGCATTGGGAGGCGGCGTGTGAGCCACTACACGCCGACATCGACACAAAGAAGACATGTGGGGTGGGGCCGGGGATGGTGTTCGCGAACGGAGTGAGAGAGCGGGTGGGGACAGTGGCGCTAGTGCCGTGCGCCGTCGGAGGAACGGCGATCAGAGAGTGGGCGCGCGGGGAGAAGCTGTACGAGGAGATGGTGAAGAGGGCGAGAGACAGCGTGAAGGGGGGTGGGGAAATTAAGGCGATCTTGTGGTTTCAAGGCGAAAGTGACACCTCTACTGAACATGACGCTGATGCGTATCAGGGGAATATGGAAGCCCTTGTTGCTAATGTGCGCCGGGACTTGGCTTTGCCTTCTCTCCCAATCATTCAGGTTAGTCTTATTATTACTAATAATAATTGAAGTATATAGTAATGTATTTTTAAAATTAACCAAATAAATCAAAATATTTATAAACTAATAAATTAAAATATTTATACACCAATAAATTTTTATCATTATCTATGAACGTTACTATAAAAGTATATCATTTATCATTTTATTGGTGTCTATTAAAAGGGTTATTTTTTACTATTCCAATCTTTTAAAGTATAGTATTTTTTTTTGTCTTTCGTATTTATTTTCTTGTAAATTTTCAGAACTTTTTTAATGTTTATTTACAGGAGATAATGGTCACCCTCATATAGGTTATCTTCCTACAAGTTCAAAATTTCTCATTTCTTAATTAGAATCACTTTTAGGATAACGTGTATTTAAAGCACGATTCTTTTATATGCTTACAATTTTTAATTGATATTTAGTTTTCAACTTTATACTTTATTCTATATTTTGGGTTGATCGTAGTTTTTCCAATTATAAAATATAAATGTCACAACAAATAAAATTATAATCTAAGTATGATCAATATCACATTGTATGCATGAATTCATAAAATGTATTTGTAAGTACACTCTAAAAAAATGCTACATATGTTTAATCAAGTTGCTCAGTTTTTCCAACTTTACCATATAAAAATGACTTAATTCTGAAATTGGTTAGACCCTAAACCTAAATCCTAAGCTGTAGAAGTATATGTTAATTAAGAAAATGATATCATGGATATAGAATTATGAGATTCTGTGTGAAAATGGGAACAGGTTGCATTGGCATCAGGATTGAAGTACACTGACAAGGTGAGGGAGGCTCAATTGGGGATGAAAATGGAGAATTTGGTGTGTGTTGATGCAATGGGATTGGAACTACAAGAAGACAACCTCCATCTCACAACACATTCTCAGGTTATTTTAGGGCAAATGTTGGTTGATGCTTACTTTACCCACTTTGCTCCACCACTTTCAAATGAGTGTCACTCTAGTTCTCATTGATAACTATTTGGTTCCGTTTACCATTTTGGAGTAATGGTGATGTATCGCACTTTTGAAGTTAGTGATTTCGATCCTTGATAGAGTATGGCGCATATCGACTTCACAAGGGCAAAATTGGATCTAAACTTTGTTATATTTGGAAATTCTTTTGCATTGTGCTATGTTGTTAATAGTTTGCATCTGATTGTTATATTTGCAATTGTGTATTCGTTTTTTGGTTCTTGAAAATTTTCTTATATGTATTACTTTCACGTTTAATGTTTTTTTTTTCTTCCTATTATCCACTATTTATATGTATGTTCAACTTCAAATCAACTCCAGTGGACGGGGTGTTGTCATTTGATGAAGACAAAATATCTACTAGAGAAAGTGGACTTTGAGTTGTTGGACTTTAGTGTTGCGTGGACATGCAATTTTGCATGAAAATTTCTTATAAATAGAGCTATTGAACTATGGGTTGATTTTTTTAGTTGGACTATTTCAACAAACCAAATTCCTATTTCTTCTTAATTTTATCAAAAAAAAAAAAAAAAAAAGAAGAAAGTTTCAAAAGCTCAACTTCACTTTATTTCCATAATTTTCTCTCTCTCGATTCTTTCATCCAACGGATCTCACATCCTGGTTCTGAGTCCGGAGAATAGTAGGTCAACTTTAGTGGTAATTCAAACAAAAACCGAAGCTTCAAATATAAGTATTCTCTAAACCCTAATTTTAATTTATCTACGGTTTATATTTTCGTGTTAATTAAGATAGAATTTTGATTCGTTTTCCACCATGTTGTTTTAGTTCTATCAAATTA ATGGCAACGACGACCGATACAGATCCCATCCACACAGATCCACCTCCAAACAAGCAGATCTTCATCCTCTCCGGACAAAGCAACATGGCGGGACGCGGCGGCGTCTTAAAGAAGCTCCGCCGATGGGACGGCGTGGTTCCACCCGAAGCACACCCGCACCCATCGATATTCCGGCTGAGCGCGAAGAAGCATTGGGAGGCGGCGTGTGAGCCACTACACGCCGACATCGACACAAAGAAGACATGTGGGGTGGGGCCGGGGATGGTGTTCGCGAACGGAGTGAGAGAGCGGGTGGGGACAGTGGCGCTAGTGCCGTGCGCCGTCGGAGGAACGGCGATCAGAGAGTGGGCGCGCGGGGAGAAGCTGTACGAGGAGATGGTGAAGAGGGCGAGAGACAGCGTGAAGGGGGGTGGGGAAATTAAGGCGATCTTGTGGTTTCAAGGCGAAAGTGACACCTCTACTGAACATGACGCTGATGCGTATCAGGGGAATATGGAAGCCCTTGTTGCTAATGTGCGCCGGGACTTGGCTTTGCCTTCTCTCCCAATCATTCAGGAGATAATGGTCACCCTCATATAG ATGGCAACGACGACCGATACAGATCCCATCCACACAGATCCACCTCCAAACAAGCAGATCTTCATCCTCTCCGGACAAAGCAACATGGCGGGACGCGGCGGCGTCTTAAAGAAGCTCCGCCGATGGGACGGCGTGGTTCCACCCGAAGCACACCCGCACCCATCGATATTCCGGCTGAGCGCGAAGAAGCATTGGGAGGCGGCGTGTGAGCCACTACACGCCGACATCGACACAAAGAAGACATGTGGGGTGGGGCCGGGGATGGTGTTCGCGAACGGAGTGAGAGAGCGGGTGGGGACAGTGGCGCTAGTGCCGTGCGCCGTCGGAGGAACGGCGATCAGAGAGTGGGCGCGCGGGGAGAAGCTGTACGAGGAGATGGTGAAGAGGGCGAGAGACAGCGTGAAGGGGGGTGGGGAAATTAAGGCGATCTTGTGGTTTCAAGGCGAAAGTGACACCTCTACTGAACATGACGCTGATGCGTATCAGGGGAATATGGAAGCCCTTGTTGCTAATGTGCGCCGGGACTTGGCTTTGCCTTCTCTCCCAATCATTCAGGAGATAATGGTCACCCTCATATAG MATTTDTDPIHTDPPPNKQIFILSGQSNMAGRGGVLKKLRRWDGVVPPEAHPHPSIFRLSAKKHWEAACEPLHADIDTKKTCGVGPGMVFANGVRERVGTVALVPCAVGGTAIREWARGEKLYEEMVKRARDSVKGGGEIKAILWFQGESDTSTEHDADAYQGNMEALVANVRRDLALPSLPIIQEIMVTLI
BLAST of CsaV3_7G008110 vs. NCBI nr
Match: XP_004136956.1 (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis sativus] >KGN43878.1 hypothetical protein Csa_7G071670 [Cucumis sativus]) HSP 1 Score: 384.8 bits (987), Expect = 1.7e-103 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. NCBI nr
Match: XP_008455001.1 (PREDICTED: probable carbohydrate esterase At4g34215 [Cucumis melo]) HSP 1 Score: 366.7 bits (940), Expect = 4.9e-98 Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. NCBI nr
Match: XP_023553837.1 (probable carbohydrate esterase At4g34215 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 344.0 bits (881), Expect = 3.4e-91 Identity = 169/189 (89.42%), Postives = 173/189 (91.53%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. NCBI nr
Match: XP_022952956.1 (probable carbohydrate esterase At4g34215 [Cucurbita moschata]) HSP 1 Score: 341.7 bits (875), Expect = 1.7e-90 Identity = 168/189 (88.89%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. NCBI nr
Match: XP_022972397.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 340.9 bits (873), Expect = 2.9e-90 Identity = 168/189 (88.89%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TAIR10
Match: AT4G34215.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-58 Identity = 115/188 (61.17%), Postives = 131/188 (69.68%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TAIR10
Match: AT3G53010.1 (Domain of unknown function (DUF303) ) HSP 1 Score: 191.0 bits (484), Expect = 6.6e-49 Identity = 96/180 (53.33%), Postives = 120/180 (66.67%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. Swiss-Prot
Match: sp|Q8L9J9|CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57 Identity = 115/188 (61.17%), Postives = 131/188 (69.68%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TrEMBL
Match: tr|A0A0A0K303|A0A0A0K303_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071670 PE=4 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.1e-103 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TrEMBL
Match: tr|A0A1S3BZF3|A0A1S3BZF3_CUCME (probable carbohydrate esterase At4g34215 OS=Cucumis melo OX=3656 GN=LOC103495282 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 3.2e-98 Identity = 176/185 (95.14%), Postives = 181/185 (97.84%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TrEMBL
Match: tr|A0A2P4KRD4|A0A2P4KRD4_QUESU (Putative carbohydrate esterase OS=Quercus suber OX=58331 GN=CFP56_22731 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.3e-69 Identity = 130/174 (74.71%), Postives = 145/174 (83.33%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TrEMBL
Match: tr|A0A2I4F758|A0A2I4F758_9ROSI (probable carbohydrate esterase At4g34215 OS=Juglans regia OX=51240 GN=LOC108996171 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 7.0e-69 Identity = 131/179 (73.18%), Postives = 146/179 (81.56%), Query Frame = 0
BLAST of CsaV3_7G008110 vs. TrEMBL
Match: tr|A0A067LQD2|A0A067LQD2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22141 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 5.0e-67 Identity = 127/174 (72.99%), Postives = 141/174 (81.03%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |