CsaV3_7G007600 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G007600
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pathogenesis related protein-1
Location	chr7 : 4728016 .. 4729269 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTCTCCAATTTTCCCTCATCCATTTGCTTGATCATGCTAACTTTAACAATCCCCATGATCGTTGCTCATAATACCCCGCAAAACTACGTTGATGCCCACAATGCAGTTCGAGCTGAGGTTGGGGCCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCGCAAAATTATCTCGATTCAAAGATTTCAACGTGTGAGATGGTGCACTCCAATGGCTCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCAGCAGCTGCAGTGAAGGCATGGGCGGACGAGAAGAAATACTATGACCATAATTCCAACAAATGCGTCGGGGGCGAGTGTCGCCATTACACCCAGTTGGTGTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCGGCTGGTAATGTTGTTGGCGAGCTACCTTATTAGATGATCAATTTGGCATTTAAATGTTCTTATTTCCATATAAATGGATTATTTGATTTTGTAATTACTACCAGAAGGATAAACATTATTCATTGTATATGTATTATTTATTTACCCAAGGACATATGATTTTGTATGAAAGAAGTAAAAGAAGGATAAACATTATTCATTAAGCTATGTTTCGGTGCAAAAAATCTATTTTTCTCTTGTTAAAATCACTTTAAATAACGTTCCAATAGAAGCTTGAGTAAAGGAAGACTCATTAAGAATATAATAAATCCACAAAGCCAGTCACCAAATCATAGTTTCCACAACACCAGAACACATCTTTGCTCCAAAAGGAAAAACAAAAGCTCAATCGAAAAGCACTCGTGATTTGTTAAAAGTCATTTTTATGGATTCATTGCAATGTTTAGCTTTATACTTTTAAAAGTGATCTTATACGTACTAATAAAATGATATGAAAAATGTTAGAAGTAGTAGAGGAGAAATTTAGACAGAGATAAACAAAAAATTGAAGATACCAAAATAAAGTTACGGAGATATAAATAAAATTTGGGGAGAATGACAAAAAGATCATGAACAACACAACTTTAAAAAAGAGAAAATTCGTAACAATGAGGATCAAAAAATTTCAAGAGCAAAATGTTGGATAAAGAGGTAAAACAAAACTAGGGGGAAAAACCAAGAGTGTATTAGTATAAGGAGAGAAAAATGTTACTTGTTCCAATAGGTAGTGCGCTACTTCGGCCCTTACCAGGTGCAAATTCATAA

mRNA sequence

ATGGCACTCTCCAATTTTCCCTCATCCATTTGCTTGATCATGCTAACTTTAACAATCCCCATGATCGTTGCTCATAATACCCCGCAAAACTACGTTGATGCCCACAATGCAGTTCGAGCTGAGGTTGGGGCCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCGCAAAATTATCTCGATTCAAAGATTTCAACGTGTGAGATGGTGCACTCCAATGGCTCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCAGCAGCTGCAGTGAAGGCATGGGCGGACGAGAAGAAATACTATGACCATAATTCCAACAAATGCGTCGGGGGCGAGTGTCGCCATTACACCCAGTTGGTGTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCGGCTGGTAGTGCGCTACTTCGGCCCTTACCAGGTGCAAATTCATAA

Coding sequence (CDS)

ATGGCACTCTCCAATTTTCCCTCATCCATTTGCTTGATCATGCTAACTTTAACAATCCCCATGATCGTTGCTCATAATACCCCGCAAAACTACGTTGATGCCCACAATGCAGTTCGAGCTGAGGTTGGGGCCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCGCAAAATTATCTCGATTCAAAGATTTCAACGTGTGAGATGGTGCACTCCAATGGCTCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCAGCAGCTGCAGTGAAGGCATGGGCGGACGAGAAGAAATACTATGACCATAATTCCAACAAATGCGTCGGGGGCGAGTGTCGCCATTACACCCAGTTGGTGTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCGGCTGGTAGTGCGCTACTTCGGCCCTTACCAGGTGCAAATTCATAA

Protein sequence

MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSALLRPLPGANS

Homology

[Close]

BLAST of CsaV3_7G007600 vs. NCBI nr
Match: XP_004137082.2 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus] >KGN43829.1 hypothetical protein Csa_7G070250 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 5.3e-85
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
           LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAG+ +
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVV 158

[Close]

BLAST of CsaV3_7G007600 vs. NCBI nr
Match: XP_008455067.1 (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo])

HSP 1 Score: 304.7 bits (779), Expect = 1.9e-79
Identity = 144/153 (94.12%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MALSN PSSICLIMLTL IPMIVAHNTPQNYVDAHNAVRAEVG DPVFWDEELAKYAQNY
Sbjct: 29  MALSNIPSSICLIMLTL-IPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNY 88

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
           L+SK+STCEMVHSNG YGENLATLDGLLTAAAAV+AWADEKKYYDHNSN CVGGECRHYT
Sbjct: 89  LESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYT 148

Query: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGS 154
           QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAG+
Sbjct: 149 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGN 180

[Close]

BLAST of CsaV3_7G007600 vs. NCBI nr
Match: XP_004137081.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 2.2e-59
Identity = 106/155 (68.39%), Postives = 131/155 (84.52%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MAL+   S++C++ L LT P+++A N+PQ++ DAHNAVRA+VGA+P+FWDEEL  YA+NY
Sbjct: 1   MALATTLSALCIVALALT-PIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNY 60

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
           + SKI TCEMVH  G YGENLAT + +LTAAA+V  WA EKKYY+HNSNKC GGECRHY 
Sbjct: 61  ITSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYR 120

Query: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           QLVWKNSFL+GCA +KCKNNWSLVSCNYSP+G+ +
Sbjct: 121 QLVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVV 154

[Close]

BLAST of CsaV3_7G007600 vs. NCBI nr
Match: XP_022148821.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia] >XP_022148826.1 basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 210.3 bits (534), Expect = 5.0e-51
Identity = 94/154 (61.04%), Postives = 120/154 (77.92%), Query Frame = 0


Query: 3   LSNFPSSICLIMLTLTIPMIV-AHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYL 62
           +S   S   + ++ LT+  I  A NTP +++ AH   R EVGA  +FWD+E+A YA+ Y 
Sbjct: 1   MSKMASLFTIFLIGLTLSSIARAQNTPDDFLKAHKKFRDEVGASEMFWDDEVAAYAKRYA 60

Query: 63  DSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQ 122
           +SKI TCEMVHS+  YGENLAT++G LTA  AV+AWADEKK YD+N+NKCVGGECRHYTQ
Sbjct: 61  ESKIDTCEMVHSDTHYGENLATVNGDLTAEMAVQAWADEKKXYDYNANKCVGGECRHYTQ 120

Query: 123 LVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           LVWK+SFL+GCA +KCKNNW+L+SCNYSP G+ +
Sbjct: 121 LVWKDSFLLGCATVKCKNNWTLISCNYSPTGNVV 154

[Close]

BLAST of CsaV3_7G007600 vs. NCBI nr
Match: XP_022148797.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 195.7 bits (496), Expect = 1.3e-46
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 9   SICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTC 68
           +ICL+   L  P+ +A N+PQ++VD HNAVRAEVG  PV WD  LA YAQNY +SK  TC
Sbjct: 13  TICLVGF-LIAPLSMAQNSPQDFVDTHNAVRAEVGVWPVSWDATLAAYAQNYANSKSETC 72

Query: 69  EMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVWKNSF 128
           EMVHSNG YGENLA   G +TA  AVK WA EKK+YDH +N+CVG EC HYTQ+VW++S 
Sbjct: 73  EMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIVWRDSK 132

Query: 129 LIGCANIKCKNNWSLVSCNYSPAGS 154
            IGCA +KC+NNW  V CNY P G+
Sbjct: 133 RIGCARVKCENNWVFVICNYDPPGN 156

[Close]

BLAST of CsaV3_7G007600 vs. TAIR10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-36
Identity = 68/146 (46.58%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 10  ICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCE 69
           + ++ ++  +    A NTPQ+Y+++HN  RA+VG   V WD  LA YA NY + + + C 
Sbjct: 9   LVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCN 68

Query: 70  MVHSNGSYGENLAT-LDGLLTAAAAVKAWADEKKYYDHNSNKCVGG-ECRHYTQLVWKNS 129
           +VHSNG YGENLA       +A +AVK W DEK YY +  N C GG +C HYTQ+VW++S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 130 FLIGCANIKCKNNWSLVSCNYSPAGS 154
             IGCA ++C N W  VSCNY+  G+
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGN 154

[Close]

BLAST of CsaV3_7G007600 vs. TAIR10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.2e-36
Identity = 61/134 (45.52%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 23  VAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCEMVHSNGSYGENLA 82
           +A +  Q +++AHN  R EVG DP+ WD+E+A YA +Y + +I+ C +VHSNG +GEN+A
Sbjct: 21  LAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENIA 80

Query: 83  TLDGLLTAAAAVKAWADEKKYYDHNSNKC---VGGECRHYTQLVWKNSFLIGCANIKCKN 142
              G ++A  A + W +EK+YYD++SN C    GG C HYTQ+VWKN+  +GCA + C +
Sbjct: 81  MSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRLGCAKVVCNS 140

Query: 143 NWSLVSCNYSPAGS 154
             + ++CNY P G+
Sbjct: 141 GGTFITCNYDPPGN 154

[Close]

BLAST of CsaV3_7G007600 vs. TAIR10
Match: AT2G14580.1 (basic pathogenesis-related protein 1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 67/149 (44.97%), Postives = 97/149 (65.10%), Query Frame = 0


Query: 8   SSICLIMLTLTIPMIV---AHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSK 67
           S I +I+  L   ++V   A ++ Q+YV+AHN  R+++G  P+ WDE LA YA+NY +  
Sbjct: 7   SRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQL 66

Query: 68  ISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVW 127
              C +VHS G YGENLA   G L+  AAV  W +EK  Y++++N C  G C HYTQ+VW
Sbjct: 67  KGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVW 126

Query: 128 KNSFLIGCANIKCKNNWSLVSCNYSPAGS 154
           +NS  +GCA ++C N  +++SCNY P G+
Sbjct: 127 RNSVRLGCAKVRCNNGGTIISCNYDPPGN 154

[Close]

BLAST of CsaV3_7G007600 vs. TAIR10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 145.6 bits (366), Expect = 2.7e-35
Identity = 63/145 (43.45%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 10  ICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCE 69
           + +    + I  + A ++PQ+++  HN  RAEVG  P+ WDE++A YA+NY + +   C 
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCA 71

Query: 70  MVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCV-GGECRHYTQLVWKNSF 129
           M HS+GSYGEN+A   G +T  AAV  W DE+  YD++SN C    +C HYTQ+VW+NS 
Sbjct: 72  MKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSE 131

Query: 130 LIGCANIKCKNNWSLVSCNYSPAGS 154
            +GCA ++C N  + ++CNY P G+
Sbjct: 132 RLGCAKVRCNNGQTFITCNYDPPGN 156

[Close]

BLAST of CsaV3_7G007600 vs. TAIR10
Match: AT2G14610.1 (pathogenesis-related gene 1)

HSP 1 Score: 136.7 bits (343), Expect = 1.3e-32
Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 24  AHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCEMVHSNGSYGENLAT 83
           A ++PQ+Y+  HN  R  VG  P+ WDE +A YA++Y +     C ++HS G YGENLA 
Sbjct: 26  AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAW 85

Query: 84  LDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVWKNSFLIGCANIKCKNNWSL 143
             G L+  +AV  W  EK  Y++ +N C  G C HYTQ+VW+ S  +GCA ++C N  ++
Sbjct: 86  GSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTI 145

Query: 144 VSCNYSPAGS 154
           +SCNY P G+
Sbjct: 146 ISCNYDPRGN 154

[Close]

BLAST of CsaV3_7G007600 vs. Swiss-Prot
Match: sp|P11670|PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 7.6e-43
Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = 0


Query: 11  CLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKISTCEM 70
           C I   + I    A N+PQ+Y++ HNA R +VG  P+ WD  LA YAQNY + +I  C M
Sbjct: 10  CFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGM 69

Query: 71  VHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVWKNSFLI 130
           +HS+G YGENLA     L AA AVK W DEK++YD+NSN CVGG C HYTQ+VW+NS  +
Sbjct: 70  IHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRL 129

Query: 131 GCANIKCKNNWSLVSCNYSPAGS 154
           GCA ++  N W  ++CNY P G+
Sbjct: 130 GCARVRSNNGWFFITCNYDPPGN 152

[Close]

BLAST of CsaV3_7G007600 vs. Swiss-Prot
Match: sp|P08299|PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-40
Identity = 74/149 (49.66%), Postives = 105/149 (70.47%), Query Frame = 0


Query: 12  LIMLTLTIPMIVAH-----NTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKIS 71
           L++ TL + ++++H     N+ Q+Y+DAHN  RA+VG +P+ WD+++A YAQNY     +
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 72  TCEMVHSNGSYGENLATLDG-LLTAAAAVKAWADEKKYYDHNSNKCVGGE-CRHYTQLVW 131
            C +VHS+G YGENLA   G  +TAA AV+ W DEK+YYDH+SN C  G+ C HYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 132 KNSFLIGCANIKCKNNWSLVSCNYSPAGS 154
           +NS  +GCA ++C N   +VSCNY P G+
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGN 161

[Close]

BLAST of CsaV3_7G007600 vs. Swiss-Prot
Match: sp|P07053|PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-40
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 13  IMLTLTIPMIVAH-----NTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKIST 72
           ++ TL + +I++H     N+ Q+Y+DAHN  RA+VG +P+ WD  +A YAQNY+    + 
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 73  CEMVHSNGSYGENLATLDG-LLTAAAAVKAWADEKKYYDHNSNKCVGGE-CRHYTQLVWK 132
           C +VHS+G YGENLA   G  +TAA AV+ W DEK+YYDH+SN C  G+ C HYTQ+VW+
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWR 133

Query: 133 NSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           NS  +GCA +KC N   +VSCNY P G+ +
Sbjct: 134 NSVRVGCARVKCNNGGYVVSCNYDPPGNVI 163

[Close]

BLAST of CsaV3_7G007600 vs. Swiss-Prot
Match: sp|P09042|PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 161.8 bits (408), Expect = 6.6e-39
Identity = 73/150 (48.67%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 13  IMLTLTIPMIVAH-----NTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKIST 72
           ++ TL + +I++H     N+ Q+Y+DAHN  RA+VG +P+ WD+++A YAQNY     + 
Sbjct: 14  LVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAAD 73

Query: 73  CEMVHSNGSYGENLATLDG-LLTAAAAVKAWADEKKYYDHNSNKCVGGE-CRHYTQLVWK 132
           C +VHS+G YGENLA   G  LTAA AV+ W +EK+YY H+SN C  G+ C HYTQ+VW+
Sbjct: 74  CNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWR 133

Query: 133 NSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           NS  +GCA ++C N   +VSCNY P G+ +
Sbjct: 134 NSVRVGCARVQCNNGGYIVSCNYDPPGNVI 163

[Close]

BLAST of CsaV3_7G007600 vs. Swiss-Prot
Match: sp|Q08697|PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-36
Identity = 70/147 (47.62%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 13  IMLTLTIPMIVAHN----TP-QNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKIST 72
           I +   I  I+ H+    TP +N+++AHNA R  VG  P+ WD+ LA YAQNY + +   
Sbjct: 5   IFVACFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADD 64

Query: 73  CEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGE-CRHYTQLVWKN 132
           C M+HS+G YGENLA     L AA AVK W DEK++YD+NSN C  G+ C HYTQ+VW+ 
Sbjct: 65  CGMIHSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRK 124

Query: 133 SFLIGCANIKCKNNWSLVSCNYSPAGS 154
           S  +GCA ++C + W  ++CNY P G+
Sbjct: 125 SVRLGCARVRCNSGWVFITCNYDPPGN 151

[Close]

BLAST of CsaV3_7G007600 vs. TrEMBL
Match: tr|A0A0A0K4C6|A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.5e-85
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY
Sbjct: 4   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 63

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
           LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT
Sbjct: 64  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 123

Query: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGSAL 156
           QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAG+ +
Sbjct: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVV 158

[Close]

BLAST of CsaV3_7G007600 vs. TrEMBL
Match: tr|A0A1S3C055|A0A1S3C055_CUCME (pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.3e-79
Identity = 144/153 (94.12%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MALSN PSSICLIMLTL IPMIVAHNTPQNYVDAHNAVRAEVG DPVFWDEELAKYAQNY
Sbjct: 29  MALSNIPSSICLIMLTL-IPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNY 88

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
           L+SK+STCEMVHSNG YGENLATLDGLLTAAAAV+AWADEKKYYDHNSN CVGGECRHYT
Sbjct: 89  LESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYT 148

Query: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGS 154
           QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAG+
Sbjct: 149 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGN 180

[Close]

BLAST of CsaV3_7G007600 vs. TrEMBL
Match: tr|A0A1S4E137|A0A1S4E137_CUCME (pathogenesis-related protein PR-1 type-like OS=Cucumis melo OX=3656 GN=LOC107991342 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 92/152 (60.53%), Postives = 112/152 (73.68%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60
           MAL    S++C++ LTLT P++VA N+PQ++VDAHNAVRA                    
Sbjct: 1   MALVTALSTLCIVALTLT-PIVVAQNSPQDFVDAHNAVRA-------------------- 60

Query: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120
              KI TCEMVHS G YGENLAT +G+LT AAAV  WA E+KYY+HNSNKCVGG+CRHYT
Sbjct: 61  ---KIKTCEMVHSVGPYGENLATANGVLTTAAAVNTWAAEEKYYNHNSNKCVGGKCRHYT 120

Query: 121 QLVWKNSFLIGCANIKCKNNW-SLVSCNYSPA 152
           QLVWKNSFL+GCA +KCK+NW S++SCNYSP+
Sbjct: 121 QLVWKNSFLVGCATVKCKDNWSSVISCNYSPS 128

[Close]

BLAST of CsaV3_7G007600 vs. TrEMBL
Match: tr|A0A1S3C012|A0A1S3C012_CUCME (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495333 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.7e-44
Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 8   SSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNYLDSKIST 67
           S+ICL+   L   +  A N+PQ++VD HN +RA VG  PV WD+ LA YAQ+Y DSKI T
Sbjct: 10  STICLVSFLLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKIDT 69

Query: 68  CEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYTQLVWKNS 127
           CEM HSNG YGENLA     +T   AVK WA EKK+Y+H+ N+CVG EC HYTQ+VW+++
Sbjct: 70  CEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRHT 129

Query: 128 FLIGCANIKCKNNWSLVSCNYSPAGS 154
             IGC  +KC+NNW  V CNY+P G+
Sbjct: 130 TNIGCGRVKCENNWVFVICNYNPPGN 155

[Close]

BLAST of CsaV3_7G007600 vs. TrEMBL
Match: tr|A0A1S3C0S3|A0A1S3C0S3_CUCME (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495334 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.3e-43
Identity = 86/158 (54.43%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 1   MALSNFPSSICLIMLTLTIPM---IVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60
           M  +N  S+ CL+ LTLT+     I+A + P+NYVDAHNA+RAEVG DP+ W+  LA YA
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYA 60

Query: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCV--GGE 120
           QNY ++KI+TC+M HS G YGENLA     +TA  AV  WADEKK+YD+NSN C      
Sbjct: 61  QNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASN 120

Query: 121 CRHYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGS 154
           C HYTQLVW+N+  +GCA +KC+NNW  + C+Y P G+
Sbjct: 121 CLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGN 158

The following BLAST results are available for this feature:

BLAST of CsaV3_7G007600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137082.2	5.3e-85	98.06	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus] >...	[more]
XP_008455067.1	1.9e-79	94.12	PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo]	[more]
XP_004137081.1	2.2e-59	68.39	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
XP_022148821.1	5.0e-51	61.04	basic form of pathogenesis-related protein 1-like [Momordica charantia] >XP_0221...	[more]
XP_022148797.1	1.3e-46	62.07	basic form of pathogenesis-related protein 1-like [Momordica charantia]	[more]

BLAST of CsaV3_7G007600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	1.4e-36	46.58	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	3.2e-36	45.52	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	1.2e-35	44.97	basic pathogenesis-related protein 1	[more]
AT4G33720.1	2.7e-35	43.45	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14610.1	1.3e-32	43.85	pathogenesis-related gene 1	[more]

BLAST of CsaV3_7G007600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P11670\|PRB1_TOBAC	7.6e-43	51.75	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
sp\|P08299\|PR1A_TOBAC	3.5e-40	49.66	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
sp\|P07053\|PR1B_TOBAC	3.5e-40	50.00	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
sp\|P09042\|PR1C_TOBAC	6.6e-39	48.67	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]
sp\|Q08697\|PR1A_SOLLC	1.8e-36	47.62	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]

BLAST of CsaV3_7G007600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4C6\|A0A0A0K4C6_CUCSA	3.5e-85	98.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=3 SV=1	[more]
tr\|A0A1S3C055\|A0A1S3C055_CUCME	1.3e-79	94.12	pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=...	[more]
tr\|A0A1S4E137\|A0A1S4E137_CUCME	1.3e-44	60.53	pathogenesis-related protein PR-1 type-like OS=Cucumis melo OX=3656 GN=LOC107991...	[more]
tr\|A0A1S3C012\|A0A1S3C012_CUCME	8.7e-44	56.16	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1S3C0S3\|A0A1S3C0S3_CUCME	3.3e-43	54.43	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR018244	Allrgn_V5/Tpx1_CS
IPR035940	CAP_sf
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G007600.1	CsaV3_7G007600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 33.85 coord: 143..156 score: 37.97 coord: 116..132 score: 54.8 coord: 93..106 score: 41.05
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 10..155
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..156 e-value: 5.9E-41 score: 152.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..148 e-value: 3.8E-18 score: 66.4
IPR035940	CAP superfamily	GENE3D	G3DSA:3.40.33.10		coord: 26..157 e-value: 7.9E-38 score: 131.8
IPR035940	CAP superfamily	SUPERFAMILY	SSF55797	PR-1-like	coord: 25..153
None	No IPR available	PANTHER	PTHR10334:SF323	SUBFAMILY NOT NAMED	coord: 10..155
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 117..127

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G007600	Cp4.1LG15g04240	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G007600	Cla001625	Watermelon (97103) v1	cucwmB635
CsaV3_7G007600	ClCG02G007230	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G007600	Cla97C02G034040	Watermelon (97103) v2	cucwmbB550

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G007600	Silver-seed gourd	carcucB0329
CsaV3_7G007600	Silver-seed gourd	carcucB0490
CsaV3_7G007600	Silver-seed gourd	carcucB0770
CsaV3_7G007600	Cucumber (Gy14) v2	cgybcucB198
CsaV3_7G007600	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G007600	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G007600	Cucumber (Gy14) v1	cgycucB540
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0057
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0232
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0414
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0589
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0918
CsaV3_7G007600	Cucurbita maxima (Rimu)	cmacucB0959
CsaV3_7G007600	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G007600	Cucurbita moschata (Rifu)	cmocucB0409
CsaV3_7G007600	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G007600	Cucurbita moschata (Rifu)	cmocucB0910
CsaV3_7G007600	Cucurbita moschata (Rifu)	cmocucB0949
CsaV3_7G007600	Cucurbita pepo (Zucchini)	cpecucB0141
CsaV3_7G007600	Cucurbita pepo (Zucchini)	cpecucB0582
CsaV3_7G007600	Cucurbita pepo (Zucchini)	cpecucB0736
CsaV3_7G007600	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G007600	Cucurbita pepo (Zucchini)	cpecucB0995
CsaV3_7G007600	Wild cucumber (PI 183967)	cpicucB123
CsaV3_7G007600	Wild cucumber (PI 183967)	cpicucB248
CsaV3_7G007600	Wild cucumber (PI 183967)	cpicucB252
CsaV3_7G007600	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G007600	Bottle gourd (USVL1VR-Ls)	cuclsiB554
CsaV3_7G007600	Bottle gourd (USVL1VR-Ls)	cuclsiB555
CsaV3_7G007600	Bottle gourd (USVL1VR-Ls)	cuclsiB573
CsaV3_7G007600	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G007600	Melon (DHL92) v3.5.1	cucmeB581
CsaV3_7G007600	Melon (DHL92) v3.5.1	cucmeB569
CsaV3_7G007600	Melon (DHL92) v3.5.1	cucmeB585
CsaV3_7G007600	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G007600	Melon (DHL92) v3.6.1	cucmedB555
CsaV3_7G007600	Melon (DHL92) v3.6.1	cucmedB572
CsaV3_7G007600	Watermelon (Charleston Gray)	cucwcgB556
CsaV3_7G007600	Watermelon (Charleston Gray)	cucwcgB601
CsaV3_7G007600	Watermelon (97103) v1	cucwmB602
CsaV3_7G007600	Watermelon (97103) v1	cucwmB607
CsaV3_7G007600	Watermelon (97103) v2	cucwmbB537
CsaV3_7G007600	Watermelon (97103) v2	cucwmbB577
CsaV3_7G007600	Wax gourd	cucwgoB674
CsaV3_7G007600	Wax gourd	cucwgoB686
CsaV3_7G007600	Wax gourd	cucwgoB702
CsaV3_7G007600	Cucumber (Chinese Long) v3	cuccucB100
CsaV3_7G007600	Cucumber (Chinese Long) v3	cuccucB188