CsaV3_7G007570 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G007570
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pathogenesis-related protein 1
Location	chr7 : 4719160 .. 4720042 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATACTCTACCCTAAGCCAAACCCCAAACTGCAAAAATAATCTTCACAAATCCCATATAATCAATAAGGAATTCTTTCAACTACTTAGCTTAGAGCTGGACGAATCCATCATTTATAAATATGGGATTTGCCAACATTCTCTCCACCCTTTGTTTATTGGGGCTAACCCTAACCCTAACCCTAACCCTAACCCTAGCTTCTACTGCTCCCAGCTTGGCCAAAAGCTCCCCCAAAAACTACATTGACGCACACAATGCCGTCCGTGCAGCGGTTGGCGTCGAGCCTCTTCATTGGAACTCGACTTTGGCTGATTATGCTCAAAATTACGCCAACACGAAGATCGCTACTTGTCAAATGGAGCACTCGGGAGGACCGTATGGCGAAAACCTAGCAGAGGGAAACGAAGTAATGACAGCTGAGACAGCAGTGAGTCTCTGGGCCGACGAGAAGAAACATTACGACTACAATTCGAATACGTGCAGCAATGACCCTAGCAATTGCCTCCATTATACACAGTTGGTATGGAGTAACACAAAATCTGTTGGTTGTGCACAAGTGAAATGCCAAAACAATTGGGTGTTTTTGATATGCAGCTATTATCCTCCAGGCAACTATAATGGCCAACGTCCATATTAAACTTTTAGAGGGGTGAGTACAAGCTAAGGCTTCTTTTTTATTCATTAGAAACTGTCTAAAGAAAGAAGAAACAAAATTGGAGAGATTTGTTCTTTAAAAAGTATTATATTTTAACTATTACTACTACTTTTTATAATTGACTCTATTCGGATTATATTTTTAATCTGAAAGATCAATTGTAGATTATGGCTTTCTTGCTGCTTGGGATAGCAGTTTGTAATGCAAACATACAAATATTTTTTGA

mRNA sequence

ATGGGATTTGCCAACATTCTCTCCACCCTTTGTTTATTGGGGCTAACCCTAACCCTAACCCTAACCCTAACCCTAGCTTCTACTGCTCCCAGCTTGGCCAAAAGCTCCCCCAAAAACTACATTGACGCACACAATGCCGTCCGTGCAGCGGTTGGCGTCGAGCCTCTTCATTGGAACTCGACTTTGGCTGATTATGCTCAAAATTACGCCAACACGAAGATCGCTACTTGTCAAATGGAGCACTCGGGAGGACCGTATGGCGAAAACCTAGCAGAGGGAAACGAAGTAATGACAGCTGAGACAGCAGTGAGTCTCTGGGCCGACGAGAAGAAACATTACGACTACAATTCGAATACGTGCAGCAATGACCCTAGCAATTGCCTCCATTATACACAGTTGGTATGGAGTAACACAAAATCTGTTGGTTGTGCACAAGTGAAATGCCAAAACAATTGGGTGTTTTTGATATGCAGCTATTATCCTCCAGGCAACTATAATGGCCAACGTCCATATTAA

Coding sequence (CDS)

ATGGGATTTGCCAACATTCTCTCCACCCTTTGTTTATTGGGGCTAACCCTAACCCTAACCCTAACCCTAACCCTAGCTTCTACTGCTCCCAGCTTGGCCAAAAGCTCCCCCAAAAACTACATTGACGCACACAATGCCGTCCGTGCAGCGGTTGGCGTCGAGCCTCTTCATTGGAACTCGACTTTGGCTGATTATGCTCAAAATTACGCCAACACGAAGATCGCTACTTGTCAAATGGAGCACTCGGGAGGACCGTATGGCGAAAACCTAGCAGAGGGAAACGAAGTAATGACAGCTGAGACAGCAGTGAGTCTCTGGGCCGACGAGAAGAAACATTACGACTACAATTCGAATACGTGCAGCAATGACCCTAGCAATTGCCTCCATTATACACAGTTGGTATGGAGTAACACAAAATCTGTTGGTTGTGCACAAGTGAAATGCCAAAACAATTGGGTGTTTTTGATATGCAGCTATTATCCTCCAGGCAACTATAATGGCCAACGTCCATATTAA

Protein sequence

MGFANILSTLCLLGLTLTLTLTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY

Homology

[Close]

BLAST of CsaV3_7G007570 vs. NCBI nr
Match: XP_004137080.2 (PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus] >KGN43826.1 hypothetical protein Csa_7G070232 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-84
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS
Sbjct: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
           SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]

BLAST of CsaV3_7G007570 vs. NCBI nr
Match: XP_008455069.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74
Identity = 136/171 (79.53%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           MGFANILST CLLGL                     PKNY+DAHNA+RA VGV+PLHWNS
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSY------PKNYVDAHNAIRAEVGVDPLHWNS 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLA YAQNYANTKIATCQMEHSGGPYGENLAEG E MTAE AVSLWADEKKHYDYNSNTC
Sbjct: 61  TLAAYAQNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
           +ND SNCLHYTQLVW NTKSVGCA+VKCQNNWVFLICSYYPPGNY GQRPY
Sbjct: 121 TNDASNCLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]

BLAST of CsaV3_7G007570 vs. NCBI nr
Match: XP_022927709.1 (pathogenesis-related protein 1A-like [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 4.1e-64
Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           M  +NILS +C LG+                    SPK+Y+DAHNA+RA VGVEPL WN 
Sbjct: 11  MASSNILSAVCFLGI------ALTLTTLAPTTAIISPKDYVDAHNAIRAEVGVEPLQWNE 70

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLA YAQNYA TKIA+C+M HSGGPYGENLAEG E MTAE AV LW DEKKHYDY+SNTC
Sbjct: 71  TLATYAQNYAETKIASCEMVHSGGPYGENLAEGYEEMTAENAVKLWVDEKKHYDYDSNTC 130

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
            ND S+CLHYTQLVW NT+SVGCA+V C NNWVFL+C+YYPPGNY+GQRPY
Sbjct: 131 VNDSSHCLHYTQLVWKNTESVGCAEVLCHNNWVFLVCNYYPPGNYDGQRPY 175

[Close]

BLAST of CsaV3_7G007570 vs. NCBI nr
Match: XP_023531881.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229.6 bits (584), Expect = 8.3e-57
Identity = 104/171 (60.82%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           M   NIL  +CLLG+                    SPK+++DAHNA+RA VG+EP+ WN 
Sbjct: 1   MASPNILKAICLLGI------ALTLTTITPTMANSSPKDFVDAHNAIRAEVGIEPVQWNE 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLA YAQ YA +KIATC+M HSGGPYGENLA G E +TAETAV LWADEKKHYD+ SN+C
Sbjct: 61  TLATYAQKYAESKIATCEMSHSGGPYGENLAVGYEGITAETAVKLWADEKKHYDHASNSC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
            NDP++C+HY QLVW NT S+GCAQVKCQNNW+F+IC YYP  +   QRPY
Sbjct: 121 GNDPTHCVHYRQLVWKNTTSIGCAQVKCQNNWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of CsaV3_7G007570 vs. NCBI nr
Match: XP_022988978.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55
Identity = 103/171 (60.23%), Postives = 123/171 (71.93%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           M   NIL  +CLLG+                    +PK+++DAHNA+RA VGVEPL WN 
Sbjct: 1   MASPNILKPICLLGI------ALTLTTITPTMANSTPKDFVDAHNAIRAEVGVEPLKWNE 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLA YAQ YA +KI TC+MEHSGGPYGENLA G E +TAETAV LWADEKKHY++ SN+C
Sbjct: 61  TLATYAQKYAESKITTCEMEHSGGPYGENLAVGYEGITAETAVKLWADEKKHYNHASNSC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
            NDP++C+HY QLVW NT S+GCAQV CQNNW+F+IC YYP  +   QRPY
Sbjct: 121 GNDPTHCVHYRQLVWKNTTSIGCAQVTCQNNWIFVICCYYPSADSIKQRPY 165

[Close]

BLAST of CsaV3_7G007570 vs. TAIR10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 157.9 bits (398), Expect = 5.5e-39
Identity = 67/136 (49.26%), Postives = 97/136 (71.32%), Query Frame = 0


Query: 38  KNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVM 97
           + +++AHN  R  VG++PL W+  +A YA +YAN +I  C + HS GP+GEN+A  +  M
Sbjct: 27  QQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHSNGPFGENIAMSSGEM 86

Query: 98  TAETAVSLWADEKKHYDYNSNTCSNDPS--NCLHYTQLVWSNTKSVGCAQVKCQNNWVFL 157
           +AE A  +W +EK++YDY+SNTC NDP+   CLHYTQ+VW NT  +GCA+V C +   F+
Sbjct: 87  SAEDAAEMWINEKQYYDYDSNTC-NDPNGGTCLHYTQVVWKNTVRLGCAKVVCNSGGTFI 146

Query: 158 ICSYYPPGNYNGQRPY 172
            C+Y PPGNY G++P+
Sbjct: 147 TCNYDPPGNYIGEKPF 161

[Close]

BLAST of CsaV3_7G007570 vs. TAIR10
Match: AT2G19990.1 (pathogenesis-related protein-1-like)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-38
Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 37  PKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEV 96
           P+  +  HN  RA VGV P+ WN TLA YAQ+YA+ +   C M+HS GP+GENLA G   
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 97  MTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNN-WVFL 156
           M+   A   W  EK++YDY+SNTC  D   C HYTQ+VW ++  +GCA V+C+N+ ++++
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGD-GVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 157 ICSYYPPGNYNGQRPY 172
           ICSY PPGNY GQRPY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

[Close]

BLAST of CsaV3_7G007570 vs. TAIR10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-38
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNE 95
           SP++++  HN  RA VGV PL W+  +A YA+NYAN +   C M+HS G YGEN+A  + 
Sbjct: 29  SPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWSSG 88

Query: 96  VMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFL 155
            MT   AV +W DE+  YDY+SNTC+ D   C HYTQ+VW N++ +GCA+V+C N   F+
Sbjct: 89  SMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQVVWRNSERLGCAKVRCNNGQTFI 148

Query: 156 ICSYYPPGNYNGQRPY 172
            C+Y PPGN+ G+ PY
Sbjct: 149 TCNYDPPGNWVGEWPY 163

[Close]

BLAST of CsaV3_7G007570 vs. TAIR10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-37
Identity = 67/137 (48.91%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEG-N 95
           +P++Y+++HN  RA VGV  + W++TLA YA NY+N + A C + HS GPYGENLA+G +
Sbjct: 26  TPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGSS 85

Query: 96  EVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVF 155
              +A +AV LW DEK +Y Y  N C+     CLHYTQ+VW ++  +GCA+V+C N W F
Sbjct: 86  SSFSAISAVKLWVDEKPYYSYAYNNCTGG-KQCLHYTQVVWRDSVKIGCARVQCTNTWWF 145

Query: 156 LICSYYPPGNYNGQRPY 172
           + C+Y  PGN+ G+ PY
Sbjct: 146 VSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CsaV3_7G007570 vs. TAIR10
Match: AT2G14580.1 (basic pathogenesis-related protein 1)

HSP 1 Score: 150.6 bits (379), Expect = 8.8e-37
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNE 95
           S ++Y++AHN  R+ +GV P+ W+  LA YA+NYAN     C++ HS GPYGENLA+   
Sbjct: 29  SQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKSGG 88

Query: 96  VMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFL 155
            ++   AV+LW +EK +Y+Y++NTC+     C HYTQ+VW N+  +GCA+V+C N    +
Sbjct: 89  DLSGVAAVNLWVNEKANYNYDTNTCN---GVCGHYTQVVWRNSVRLGCAKVRCNNGGTII 148

Query: 156 ICSYYPPGNYNGQRPY 172
            C+Y PPGNY  Q+PY
Sbjct: 149 SCNYDPPGNYANQKPY 161

[Close]

BLAST of CsaV3_7G007570 vs. Swiss-Prot
Match: sp|P11670|PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.2e-40
Identity = 73/136 (53.68%), Postives = 94/136 (69.12%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNE 95
           SP++Y++ HNA R  VGV P+ W++ LA YAQNYAN +I  C M HS GPYGENLA    
Sbjct: 26  SPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAAAFP 85

Query: 96  VMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFL 155
            + A  AV +W DEK+ YDYNSN+C      C HYTQ+VW N+  +GCA+V+  N W F+
Sbjct: 86  QLNAAGAVKMWVDEKRFYDYNSNSCVG--GVCGHYTQVVWRNSVRLGCARVRSNNGWFFI 145

Query: 156 ICSYYPPGNYNGQRPY 172
            C+Y PPGN+ GQRP+
Sbjct: 146 TCNYDPPGNFIGQRPF 159

[Close]

BLAST of CsaV3_7G007570 vs. Swiss-Prot
Match: sp|P08299|PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-39
Identity = 75/137 (54.74%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGN- 95
           S ++Y+DAHN  RA VGVEPL W+  +A YAQNYA+   A C + HS G YGENLAEG+ 
Sbjct: 33  SQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAEGSG 92

Query: 96  EVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVF 155
           + MTA  AV +W DEK++YD++SNTC+     C HYTQ+VW N+  VGCA+V+C N    
Sbjct: 93  DFMTAAKAVEMWVDEKQYYDHDSNTCAQG-QVCGHYTQVVWRNSVRVGCARVQCNNGGYV 152

Query: 156 LICSYYPPGNYNGQRPY 172
           + C+Y PPGNY G+ PY
Sbjct: 153 VSCNYDPPGNYRGESPY 168

[Close]

BLAST of CsaV3_7G007570 vs. Swiss-Prot
Match: sp|P07053|PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-38
Identity = 74/137 (54.01%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGN- 95
           S ++Y+DAHN  RA VGVEPL W++ +A YAQNY +   A C + HS G YGENLA+G+ 
Sbjct: 33  SQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQGSG 92

Query: 96  EVMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVF 155
           + MTA  AV +W DEK++YD++SNTC+     C HYTQ+VW N+  VGCA+VKC N    
Sbjct: 93  DFMTAAKAVEMWVDEKQYYDHDSNTCAQG-QVCGHYTQVVWRNSVRVGCARVKCNNGGYV 152

Query: 156 LICSYYPPGNYNGQRPY 172
           + C+Y PPGN  GQ PY
Sbjct: 153 VSCNYDPPGNVIGQSPY 168

[Close]

BLAST of CsaV3_7G007570 vs. Swiss-Prot
Match: sp|Q08697|PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-36
Identity = 69/128 (53.91%), Postives = 88/128 (68.75%), Query Frame = 0


Query: 38  KNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVM 97
           +N+++AHNA R  VGV P+ W+  LA YAQNYAN +   C M HS GPYGENLA     +
Sbjct: 26  ENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAAAFPQL 85

Query: 98  TAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLIC 157
            A  AV +W DEK+ YDYNSNTC+     C HYTQ+VW  +  +GCA+V+C + WVF+ C
Sbjct: 86  NAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQVVWRKSVRLGCARVRCNSGWVFITC 145

Query: 158 SYYPPGNY 166
           +Y PPGNY
Sbjct: 146 NYDPPGNY 152

[Close]

BLAST of CsaV3_7G007570 vs. Swiss-Prot
Match: sp|Q9ZNS4|PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.6e-35
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 36  SPKNYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNE 95
           S ++Y++AHN  R+ +GV P+ W+  LA YA+NYAN     C++ HS GPYGENLA+   
Sbjct: 29  SQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKSGG 88

Query: 96  VMTAETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFL 155
            ++   AV+LW +EK +Y+Y++NTC+     C HYTQ+VW N+  +GCA+V+C N    +
Sbjct: 89  DLSGVAAVNLWVNEKANYNYDTNTCN---GVCGHYTQVVWRNSVRLGCAKVRCNNGGTII 148

Query: 156 ICSYYPPGNYNGQRPY 172
            C+Y PPGNY  Q+PY
Sbjct: 149 SCNYDPPGNYANQKPY 161

[Close]

BLAST of CsaV3_7G007570 vs. TrEMBL
Match: tr|A0A0A0K7N5|A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.1e-84
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS
Sbjct: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
           SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]

BLAST of CsaV3_7G007570 vs. TrEMBL
Match: tr|A0A1S3C0S3|A0A1S3C0S3_CUCME (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495334 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.3e-74
Identity = 136/171 (79.53%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           MGFANILST CLLGL                     PKNY+DAHNA+RA VGV+PLHWNS
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSY------PKNYVDAHNAIRAEVGVDPLHWNS 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           TLA YAQNYANTKIATCQMEHSGGPYGENLAEG E MTAE AVSLWADEKKHYDYNSNTC
Sbjct: 61  TLAAYAQNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
           +ND SNCLHYTQLVW NTKSVGCA+VKCQNNWVFLICSYYPPGNY GQRPY
Sbjct: 121 TNDASNCLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]

BLAST of CsaV3_7G007570 vs. TrEMBL
Match: tr|A0A251MYF6|A0A251MYF6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G155000 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.5e-46
Identity = 89/171 (52.05%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 1   MGFANILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNS 60
           MGF+N+   +C + L                      ++++D HN  RAAVGV P+ WN 
Sbjct: 1   MGFSNLSLYICSVALLLAARVSLARKVGYAPNPSNPHQDFVDEHNRARAAVGVGPIRWND 60

Query: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120
           T+A YAQNYANT+I  C MEHSGGPYGENLAEG   MT   AV  W  E+ +YDY SN C
Sbjct: 61  TVAAYAQNYANTRIRGCDMEHSGGPYGENLAEGYGEMTGAQAVKFWVTERPNYDYGSNKC 120

Query: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
             D   C HYTQ+VW N+  +GCA+ KC NNWVF+ICSY PPGNY G+RPY
Sbjct: 121 VGD--ECGHYTQVVWRNSVHLGCARAKCDNNWVFVICSYDPPGNYEGERPY 169

[Close]

BLAST of CsaV3_7G007570 vs. TrEMBL
Match: tr|A0A2P5AAT5|A0A2P5AAT5_9ROSA (Cysteine-rich secretory protein, allergen V5/Tpx-1-related OS=Trema orientalis OX=63057 GN=TorRG33x02_354600 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 84/133 (63.16%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 39  NYIDAHNAVRAAVGVEPLHWNSTLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMT 98
           +++  HNA+RA VGV PL WN TLA YA+NYAN+KI  C+MEHSGGPYGENLAEG   M+
Sbjct: 37  DFVATHNAIRAEVGVGPLSWNKTLAAYARNYANSKIGNCEMEHSGGPYGENLAEGYGHMS 96

Query: 99  AETAVSLWADEKKHYDYNSNTCSNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICS 158
            E AV  WA EK +YDY SN C ND   C HYTQ+VW N+  +GCA+ KC+N W+F+ICS
Sbjct: 97  GEEAVKFWATEKANYDYASNKCVND--ECGHYTQVVWRNSVHLGCARAKCRNGWMFVICS 156

Query: 159 YYPPGNYNGQRPY 172
           Y PPGNY G+RPY
Sbjct: 157 YDPPGNYEGERPY 167

[Close]

BLAST of CsaV3_7G007570 vs. TrEMBL
Match: tr|A0A1S3C012|A0A1S3C012_CUCME (basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495333 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.7e-45
Identity = 88/166 (53.01%), Postives = 113/166 (68.07%), Query Frame = 0


Query: 6   ILSTLCLLGLXXXXXXXXXXXXXXXXXXXXSPKNYIDAHNAVRAAVGVEPLHWNSTLADY 65
           ILST+CL+                      SP++++D HN +RAAVGV P+ W+ TLA Y
Sbjct: 8   ILSTICLVSF---------LLATTISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAY 67

Query: 66  AQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTCSNDPS 125
           AQ+YA++KI TC+MEHS GPYGENLAEG + MT   AV  WA EKK Y+++ N C  D  
Sbjct: 68  AQSYADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGD-- 127

Query: 126 NCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 172
            C HYTQ+VW +T ++GC +VKC+NNWVF+IC+Y PPGNY GQ PY
Sbjct: 128 ECGHYTQIVWRHTTNIGCGRVKCENNWVFVICNYNPPGNYIGQHPY 162

The following BLAST results are available for this feature:

BLAST of CsaV3_7G007570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137080.2	1.6e-84	100.00	PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus] >KGN43826.1 hy...	[more]
XP_008455069.1	2.0e-74	79.53	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
XP_022927709.1	4.1e-64	67.84	pathogenesis-related protein 1A-like [Cucurbita moschata]	[more]
XP_023531881.1	8.3e-57	60.82	basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988978.1	1.6e-55	60.23	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_7G007570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19690.1	5.5e-39	49.26	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G19990.1	1.6e-38	52.21	pathogenesis-related protein-1-like	[more]
AT4G33720.1	1.6e-38	50.00	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT1G50060.1	2.3e-37	48.91	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	8.8e-37	47.06	basic pathogenesis-related protein 1	[more]

BLAST of CsaV3_7G007570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P11670\|PRB1_TOBAC	8.2e-40	53.68	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
sp\|P08299\|PR1A_TOBAC	1.8e-39	54.74	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
sp\|P07053\|PR1B_TOBAC	3.4e-38	54.01	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
sp\|Q08697\|PR1A_SOLLC	1.1e-36	53.91	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
sp\|Q9ZNS4\|PRB1_ARATH	1.6e-35	47.06	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]

BLAST of CsaV3_7G007570 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7N5\|A0A0A0K7N5_CUCSA	1.1e-84	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070232 PE=3 SV=1	[more]
tr\|A0A1S3C0S3\|A0A1S3C0S3_CUCME	1.3e-74	79.53	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A251MYF6\|A0A251MYF6_PRUPE	2.5e-46	52.05	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G155000 PE=3 SV=1	[more]
tr\|A0A2P5AAT5\|A0A2P5AAT5_9ROSA	1.3e-45	63.16	Cysteine-rich secretory protein, allergen V5/Tpx-1-related OS=Trema orientalis O...	[more]
tr\|A0A1S3C012\|A0A1S3C012_CUCME	3.7e-45	53.01	basic form of pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **INTERPRO**
Term	Definition
IPR034111	SCP_PR1-like
IPR018244	Allrgn_V5/Tpx1_CS
IPR035940	CAP_sf
IPR014044	CAP_domain
IPR001283	Allrgn_V5/Tpx1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G007570.1	CsaV3_7G007570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 102..115 score: 41.05 coord: 127..143 score: 54.24 coord: 56..74 score: 39.28 coord: 154..167 score: 48.05
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 18..171
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 35..167 e-value: 3.8E-52 score: 189.2
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 42..159 e-value: 1.0E-23 score: 84.5
IPR035940	CAP superfamily	GENE3D	G3DSA:3.40.33.10		coord: 35..171 e-value: 9.3E-44 score: 151.0
IPR035940	CAP superfamily	SUPERFAMILY	SSF55797	PR-1-like	coord: 10..171
None	No IPR available	PANTHER	PTHR10334:SF259	CYSTEINE-RICH SECRETORY PROTEINS, ANTIGEN 5, AND PATHOGENESIS-RELATED 1 PROTEIN SUPERFAMILY PROTEIN-RELATED	coord: 18..171
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 154..165
IPR034111	Pathogenesis-related protein 1-like, SCP domain	CDD	cd05381	SCP_PR-1_like	coord: 37..171 e-value: 1.05198E-68 score: 206.715

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G007570	Cla001626	Watermelon (97103) v1	cucwmB635
CsaV3_7G007570	ClCG02G007240	Watermelon (Charleston Gray)	cucwcgB572
CsaV3_7G007570	MELO3C018541.2	Melon (DHL92) v3.6.1	cucmedB536

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G007570	Silver-seed gourd	carcucB0329
CsaV3_7G007570	Silver-seed gourd	carcucB0490
CsaV3_7G007570	Silver-seed gourd	carcucB0770
CsaV3_7G007570	Cucumber (Gy14) v2	cgybcucB198
CsaV3_7G007570	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G007570	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G007570	Cucumber (Gy14) v1	cgycucB540
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0057
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0232
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0414
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0589
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0918
CsaV3_7G007570	Cucurbita maxima (Rimu)	cmacucB0959
CsaV3_7G007570	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G007570	Cucurbita moschata (Rifu)	cmocucB0409
CsaV3_7G007570	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G007570	Cucurbita moschata (Rifu)	cmocucB0910
CsaV3_7G007570	Cucurbita moschata (Rifu)	cmocucB0949
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0141
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0582
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0736
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G007570	Cucurbita pepo (Zucchini)	cpecucB0995
CsaV3_7G007570	Wild cucumber (PI 183967)	cpicucB123
CsaV3_7G007570	Wild cucumber (PI 183967)	cpicucB248
CsaV3_7G007570	Wild cucumber (PI 183967)	cpicucB252
CsaV3_7G007570	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G007570	Bottle gourd (USVL1VR-Ls)	cuclsiB554
CsaV3_7G007570	Bottle gourd (USVL1VR-Ls)	cuclsiB555
CsaV3_7G007570	Bottle gourd (USVL1VR-Ls)	cuclsiB573
CsaV3_7G007570	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G007570	Melon (DHL92) v3.5.1	cucmeB581
CsaV3_7G007570	Melon (DHL92) v3.5.1	cucmeB569
CsaV3_7G007570	Melon (DHL92) v3.5.1	cucmeB585
CsaV3_7G007570	Melon (DHL92) v3.6.1	cucmedB555
CsaV3_7G007570	Melon (DHL92) v3.6.1	cucmedB572
CsaV3_7G007570	Watermelon (Charleston Gray)	cucwcgB556
CsaV3_7G007570	Watermelon (Charleston Gray)	cucwcgB601
CsaV3_7G007570	Watermelon (97103) v1	cucwmB602
CsaV3_7G007570	Watermelon (97103) v1	cucwmB607
CsaV3_7G007570	Watermelon (97103) v2	cucwmbB537
CsaV3_7G007570	Watermelon (97103) v2	cucwmbB550
CsaV3_7G007570	Watermelon (97103) v2	cucwmbB577
CsaV3_7G007570	Wax gourd	cucwgoB674
CsaV3_7G007570	Wax gourd	cucwgoB686
CsaV3_7G007570	Wax gourd	cucwgoB702
CsaV3_7G007570	Cucumber (Chinese Long) v3	cuccucB100
CsaV3_7G007570	Cucumber (Chinese Long) v3	cuccucB188