CsaV3_7G007470 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGCATCAGTTGCTCGATTCCTATTGGCTCATTCCTCCTTCGCTGTTCCACGTCATCGCTTCTCTAAATTCCTCCAATTTCTCCATTCTCTATATTTAATTTCATTCTCAATCAACCGACTCTCCCCATCTCCTTCCTTCCCGCTACATTCTTTCTCTTTAACATTTTCTCTCCGTATTTTTCATCCATTTTCAAGAGCTTTCACAATCCACGACGAATTGATCTCTGTTTCTGGTTTTCTTATGGCTGCTCTTCCCAGATTTTTTCTCTCCACCCTTTTCTTGCTTCTGGTTCTTCGTCCTTCCTATGGAGCTCTCCATTCTTCCCCTCATCTCAACCCCACCAACCCCAAATCCGTTTCTGTCAGTAATTCTTTCTCTCATCAATCATCGTTTGTTTGTTTGTTTTTTTTTTTTAATTATTTTTATTTTTATTTTTATTTTGTGGGGTTTTGAGATTTTGATATGTTTTTCTGTTTTGATTGAAGTTTTTGTTGGGTTTTTGTTTTTGAAGGATTTGGTTTTGTTGTTTTGGTGTCTCGTTTTGTATTCTTTGATGGGTCTGGCTATTTGATGCTTAGTTTGCAACTTTTGAGGATTTTTTTGGTGTTTGATTGGGTTTGTTCTTGTTATATTTTAAAGGATTTGATAATTTGTTTCTTCGTAGGTTTCTGATTTGATGCTTAATCTGTGGGGTTTTGATCATTTTCTGCTCACATTGTGTTGTTTGATTGTTTCTCTAACCAGCCAGTTGGGATTTTAAGGATTTGATTATTTTATTTTGTTTTTGTAAATGTTTGATTCCTCATGCTTTAATTTGTGGATTTTAGGGGTTTTGTTAGTTTTTCCTGCTTAGATTTTGGTGCTTTTATTGATGGGCTGGGTTTGTTGGCTTTTTGATGAATTGATAATGGTTTTCTAAATCTCTGATTATTGATGCTTAATTTTGATACTAACATTGTGGCGTTTTTATTGTTTTCTTTGGACAGTCGATTGAAACTATGGTAGATGGGTTTACAAAGGATTTAAAAGAGATGATTAAGAAGGGATTAGGGTTTAGGGGCGACGATTTCAAGGTCTCAGGAGTTGATTTCAAAGATGCAAGGGCTGGGAATTCGGTTGCTTATGAGTTTGAGTTGGAGATTGATAACCAAGTTTTTCCATTGAAGTTTTTGGAAAATGCCCAACAATGGGACTATGTGGATTTGCCTATTTTTCAGATTCAAGAGCAGTCTCAAGACGAAGATAAAAATTTGTTGGCCCAGAAACGTAATCTGGGCTCTGATTTACCTGTTTTGGCTCCCTTTCAGCTCGCCGGTCCGATGGAGCTCTGGATTCAGGATGCTGATGGCATGAGGGTCTCATTGCCAGTGAGTATCTTTTTATTGCTTTTGATTTGGTTCATTATAAGTTTCTACTGACTTGATAGACTGCTGCAATTTGTGCTTTTGGGGGTTTAATGGTTGATGATGATACCCATTGGATTAGAATTTGTCTTCTATTTTGTTTATCTGCGTATGTATCTTGATGAAGGCTTTAGGTTTGGAAGTTCTGGTTTGAAAATGTAGGTGGTTTACTATAGTTTAGTCTAGTTTTTCATGTTTATTGACTCCACTTTTGAAAGTTCTGCTTTAGACTTAACTTTGCATAAAAAGATCATCGCTGTTACTGATTTGATGACAAAAATAGGTAGCCTTTTGTTCATTGGCTTGATCCATTGACACACTAATATGAAAAATTGTTTGAAGCCATATGGATTAGATGTTGTCTTGAACCTTAATTAAAAGATGTTAACGTACGTGCAAGTTAATTTGAAACGTACCAAAACTAGCGCAACAGTATTTGCTATGCATTCCTTCCTTGAGGTTGGAGTTTCAAATCTCCACATCTCACTTATCGTACTGAAGGAAAAAAAAAGAATTTCTTTTCGGACAGGTGTTAAAATTAACTTTTAGTACTTTACATGATCTTTTAAACTTCAAGGACATAGTTATACAACCTACCTCTTGTTCAAGTAATGTCGTTTCTATTTGTACTAGTTATACAACCTACCTCTTGTTCAAGTAATGTTGTTTCTATTTGTACTAGTTATACAACCTACCTCTTGTTCAAGTAATGTCGTTTCTATTTGTACTAGTTATACAACCTACCTCTTGTTCAAGTAATGTCGTTTCTATTTGTACTATGGATGTTAATTCATATATCTTTGTAATACATAAACTCTGCTGCCTTCTTGTGCCCTTTTGAATGTAATTGTACATATAGCAAGCATGAAAGGCTATTTTCTAAGCTGTTGCTTTGTTTGCCACTGAATTTGCAGCACGATGTAGATGCTGGTGTCTTGAGAAAGGTTGTTCTGGCAGATGGAGCAGTTGTTACTGTAACTGGTGCTAGATCTGTTAGCCTTCGTCAACCGCTCGATCTTCCTCTCCCTCTCAATCGAACAACCCCTGGTTTCGCTACGGGTCTGGTAGCCTTAGCCGAACAACTCCGCCACACATCTCGATCTCAATCAACCCCACTCCTTTCTCTTCGCATAGTTGGTCCTACCTCCCTCACTTCATCTCCTAGCTCCACCAACAAGCTCAAGCTCAAGCGCCTAGCCCCTGGCCTAGTCGAACTCTCATCCCCCATCCAAGCCATCCAGTCTCCTTCCCCAGTCCATCTTCAACCCAATGCCCCAACCATTCTAACACCAAAGGCATTCACAACACTGTGGCCAATCACCTCCATCAACGGCTCGAACTCGAAATTAGTTGGTTTCGAGACACTTCTGACATCTCTTCTCGGCCCGAAAGCAAATGGAAAGGGCTCATTCAAGCTGTTAAAGGCCAATGTCTCCGCTCAAACAACTGTGAGGATTGGTTTTGGTGTTGACAAGAAGTTGGAAGAAGGAGATGGGATCGACATGGAGGGATTTCCTGAATGGAGGACTAAACCTGAGGCTGTGAGGTTGCATTTCGAGGTTCTGGCAACGCTCGATGGTGAACGGATCATACCAGAGAGGGTAATGCAGGTTAAGCCAGTGATAGTTGAGGACACGGTTGCACCTAATGTGCTACTTGGGAACGTGAGTATGTCAAAAACTCCTATTGTTTATACCCCATCTGATCCTTTCACCCTGTAGTTGGTATCTGCATGTTTTGGTTGTCTTTTGGGGTCAGTGCCCTTTTATGGTTAAAAGTGTAAAAAATATATATTGAGTGAATATAGAGAGAAGTTGAGTACTGTAAGAACTACTGATATTCAAAGTTTCTCTACAAAATTTTATTTTATTATTTCTTTTTAGGTTATTTGTTTTCTTTTTTTCAAAGGTTGATGGTTTTTGTACAACTCTTTTTTATGTGACTTAACTTAATGCAATTGAAATACATTTTTACTATGAAAAGATATTCAGACACAGTGGAATCTTATATTATAACATTATACAAACACACAAACGTTTTAAGTTCAATACCATACCATAGGTCTAAATTAGTACATGACAGAGTTCATTATCGTTATCTTATTCATAGACCCGTCAATTGGAATATAATAATATAAAGATTTTACATGGTGATCTTCTTCTTACGATCATTAGCAAGTTGTTTGAGTGGTTCCATTTGAATGATTGAGTTTGGTAATTTTTGTGCGACCATAATATGAAAGAGACCCATAACTCCAATGTGAGTTTGAGAAGGATGATATTTGGATATCAGAGTTAACATTTCTTTATTGTTGAGTTTGACTGAGCCTGGCTTTGGATAACAAGTTGACATCCCAACCACATAACCCTTCTCATTCCCTATTTCACTTCCATTTCCATATATGGGAGATGAAGAACATAACTCTCTTCCATC ATGGCTGCTCTTCCCAGATTTTTTCTCTCCACCCTTTTCTTGCTTCTGGTTCTTCGTCCTTCCTATGGAGCTCTCCATTCTTCCCCTCATCTCAACCCCACCAACCCCAAATCCGTTTCTTCGATTGAAACTATGGTAGATGGGTTTACAAAGGATTTAAAAGAGATGATTAAGAAGGGATTAGGGTTTAGGGGCGACGATTTCAAGGTCTCAGGAGTTGATTTCAAAGATGCAAGGGCTGGGAATTCGGTTGCTTATGAGTTTGAGTTGGAGATTGATAACCAAGTTTTTCCATTGAAGTTTTTGGAAAATGCCCAACAATGGGACTATGTGGATTTGCCTATTTTTCAGATTCAAGAGCAGTCTCAAGACGAAGATAAAAATTTGTTGGCCCAGAAACGTAATCTGGGCTCTGATTTACCTGTTTTGGCTCCCTTTCAGCTCGCCGGTCCGATGGAGCTCTGGATTCAGGATGCTGATGGCATGAGGGTCTCATTGCCACACGATGTAGATGCTGGTGTCTTGAGAAAGGTTGTTCTGGCAGATGGAGCAGTTGTTACTGTAACTGGTGCTAGATCTGTTAGCCTTCGTCAACCGCTCGATCTTCCTCTCCCTCTCAATCGAACAACCCCTGGTTTCGCTACGGGTCTGGTAGCCTTAGCCGAACAACTCCGCCACACATCTCGATCTCAATCAACCCCACTCCTTTCTCTTCGCATAGTTGGTCCTACCTCCCTCACTTCATCTCCTAGCTCCACCAACAAGCTCAAGCTCAAGCGCCTAGCCCCTGGCCTAGTCGAACTCTCATCCCCCATCCAAGCCATCCAGTCTCCTTCCCCAGTCCATCTTCAACCCAATGCCCCAACCATTCTAACACCAAAGGCATTCACAACACTGTGGCCAATCACCTCCATCAACGGCTCGAACTCGAAATTAGTTGGTTTCGAGACACTTCTGACATCTCTTCTCGGCCCGAAAGCAAATGGAAAGGGCTCATTCAAGCTGTTAAAGGCCAATGTCTCCGCTCAAACAACTGTGAGGATTGGTTTTGGTGTTGACAAGAAGTTGGAAGAAGGAGATGGGATCGACATGGAGGGATTTCCTGAATGGAGGACTAAACCTGAGGCTGTGAGGTTGCATTTCGAGGTTCTGGCAACGCTCGATGGTGAACGGATCATACCAGAGAGGGTAATGCAGGTTAAGCCAGTGATAGTTGAGGACACGGTTGCACCTAATGTGCTACTTGGGAACGTGAGTATGTCAAAAACTCCTATTGTTTATACCCCATCTGATCCTTTCACCCTGTAG ATGGCTGCTCTTCCCAGATTTTTTCTCTCCACCCTTTTCTTGCTTCTGGTTCTTCGTCCTTCCTATGGAGCTCTCCATTCTTCCCCTCATCTCAACCCCACCAACCCCAAATCCGTTTCTTCGATTGAAACTATGGTAGATGGGTTTACAAAGGATTTAAAAGAGATGATTAAGAAGGGATTAGGGTTTAGGGGCGACGATTTCAAGGTCTCAGGAGTTGATTTCAAAGATGCAAGGGCTGGGAATTCGGTTGCTTATGAGTTTGAGTTGGAGATTGATAACCAAGTTTTTCCATTGAAGTTTTTGGAAAATGCCCAACAATGGGACTATGTGGATTTGCCTATTTTTCAGATTCAAGAGCAGTCTCAAGACGAAGATAAAAATTTGTTGGCCCAGAAACGTAATCTGGGCTCTGATTTACCTGTTTTGGCTCCCTTTCAGCTCGCCGGTCCGATGGAGCTCTGGATTCAGGATGCTGATGGCATGAGGGTCTCATTGCCACACGATGTAGATGCTGGTGTCTTGAGAAAGGTTGTTCTGGCAGATGGAGCAGTTGTTACTGTAACTGGTGCTAGATCTGTTAGCCTTCGTCAACCGCTCGATCTTCCTCTCCCTCTCAATCGAACAACCCCTGGTTTCGCTACGGGTCTGGTAGCCTTAGCCGAACAACTCCGCCACACATCTCGATCTCAATCAACCCCACTCCTTTCTCTTCGCATAGTTGGTCCTACCTCCCTCACTTCATCTCCTAGCTCCACCAACAAGCTCAAGCTCAAGCGCCTAGCCCCTGGCCTAGTCGAACTCTCATCCCCCATCCAAGCCATCCAGTCTCCTTCCCCAGTCCATCTTCAACCCAATGCCCCAACCATTCTAACACCAAAGGCATTCACAACACTGTGGCCAATCACCTCCATCAACGGCTCGAACTCGAAATTAGTTGGTTTCGAGACACTTCTGACATCTCTTCTCGGCCCGAAAGCAAATGGAAAGGGCTCATTCAAGCTGTTAAAGGCCAATGTCTCCGCTCAAACAACTGTGAGGATTGGTTTTGGTGTTGACAAGAAGTTGGAAGAAGGAGATGGGATCGACATGGAGGGATTTCCTGAATGGAGGACTAAACCTGAGGCTGTGAGGTTGCATTTCGAGGTTCTGGCAACGCTCGATGGTGAACGGATCATACCAGAGAGGGTAATGCAGGTTAAGCCAGTGATAGTTGAGGACACGGTTGCACCTAATGTGCTACTTGGGAACGTGAGTATGTCAAAAACTCCTATTGTTTATACCCCATCTGATCCTTTCACCCTGTAG MAALPRFFLSTLFLLLVLRPSYGALHSSPHLNPTNPKSVSSIETMVDGFTKDLKEMIKKGLGFRGDDFKVSGVDFKDARAGNSVAYEFELEIDNQVFPLKFLENAQQWDYVDLPIFQIQEQSQDEDKNLLAQKRNLGSDLPVLAPFQLAGPMELWIQDADGMRVSLPHDVDAGVLRKVVLADGAVVTVTGARSVSLRQPLDLPLPLNRTTPGFATGLVALAEQLRHTSRSQSTPLLSLRIVGPTSLTSSPSSTNKLKLKRLAPGLVELSSPIQAIQSPSPVHLQPNAPTILTPKAFTTLWPITSINGSNSKLVGFETLLTSLLGPKANGKGSFKLLKANVSAQTTVRIGFGVDKKLEEGDGIDMEGFPEWRTKPEAVRLHFEVLATLDGERIIPERVMQVKPVIVEDTVAPNVLLGNVSMSKTPIVYTPSDPFTL
BLAST of CsaV3_7G007470 vs. NCBI nr
Match: XP_004136917.1 (PREDICTED: uncharacterized protein LOC101210086 [Cucumis sativus]) HSP 1 Score: 845.9 bits (2184), Expect = 6.2e-242 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. NCBI nr
Match: XP_008455079.1 (PREDICTED: uncharacterized protein LOC103495343 [Cucumis melo]) HSP 1 Score: 768.8 bits (1984), Expect = 9.6e-219 Identity = 403/436 (92.43%), Postives = 404/436 (92.66%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. NCBI nr
Match: KGN43817.1 (hypothetical protein Csa_7G069190 [Cucumis sativus]) HSP 1 Score: 758.4 bits (1957), Expect = 1.3e-215 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. NCBI nr
Match: XP_022927834.1 (uncharacterized protein LOC111434603 [Cucurbita moschata]) HSP 1 Score: 640.2 bits (1650), Expect = 5.1e-180 Identity = 335/435 (77.01%), Postives = 373/435 (85.75%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. NCBI nr
Match: XP_023531797.1 (uncharacterized protein LOC111793944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 639.8 bits (1649), Expect = 6.7e-180 Identity = 335/435 (77.01%), Postives = 372/435 (85.52%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TAIR10
Match: AT5G64510.1 (unknown protein) HSP 1 Score: 488.0 bits (1255), Expect = 5.9e-138 Identity = 260/430 (60.47%), Postives = 330/430 (76.74%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TAIR10
Match: AT1G47310.1 (unknown protein) HSP 1 Score: 80.1 bits (196), Expect = 3.7e-15 Identity = 92/413 (22.28%), Postives = 173/413 (41.89%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TrEMBL
Match: tr|A0A1S3C0T4|A0A1S3C0T4_CUCME (uncharacterized protein LOC103495343 OS=Cucumis melo OX=3656 GN=LOC103495343 PE=4 SV=1) HSP 1 Score: 768.8 bits (1984), Expect = 6.3e-219 Identity = 403/436 (92.43%), Postives = 404/436 (92.66%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TrEMBL
Match: tr|A0A0A0K693|A0A0A0K693_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G069190 PE=4 SV=1) HSP 1 Score: 758.4 bits (1957), Expect = 8.6e-216 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TrEMBL
Match: tr|A0A1Q3BBD6|A0A1Q3BBD6_CEPFO (Uncharacterized protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_08637 PE=4 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 5.9e-148 Identity = 285/438 (65.07%), Postives = 344/438 (78.54%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TrEMBL
Match: tr|A0A2H5Q9T4|A0A2H5Q9T4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_209600 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 7.6e-148 Identity = 282/434 (64.98%), Postives = 336/434 (77.42%), Query Frame = 0
BLAST of CsaV3_7G007470 vs. TrEMBL
Match: tr|V4SAQ6|V4SAQ6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10028503mg PE=4 SV=1) HSP 1 Score: 532.3 bits (1370), Expect = 1.0e-147 Identity = 281/434 (64.75%), Postives = 336/434 (77.42%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |