CsaV3_7G007360 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G007360
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRING/U-box superfamily protein
Locationchr7 : 4591066 .. 4591872 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCTTCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTGCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAGCTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAGAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCTTCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTGCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAGCTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAGAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCAGCACAAATCTTTGATATGTGTATGAATCGTCCCTTCGTCGGCATGTCACTAAAAATCAAGGACTCCATCACCAGCCTGCATCGAACACGAAAACGAATACGAACTCGACGAAACTCTTCAAAATATGTCGAACACATCGACCTTAATTTCAAAGTGCAACTCAGATGCACTCACGTTCTTCAAGAATATGAAGATGGCATAATGACTACAACAAGTTTCCTTCATGAACACACATCTTCATCGCATCCTTTAGCAACTTACCAGCTTCCTATCTCCATCTTCAAGAACGGCAACAGCACTTTGGAGCAATATCTTTGTGATAGGTTGCATGCACATCGAGAACTCATTGACATTACACTTGTGGCTGATAGAATAATACAGCATTGGGTTAAAAAGGTTGAAGAAGATGATTGTGATCATGATGAAGAAGAGAATAATGAAGACTTTAATGTATTTCAAAAGATTCATTCTCTTGAAATTACGTTAGAGATGAAGATTAATAGGAGGTATGTTGTAGAATCACCGGTAATGATAATGGTTCCAACAAGTGATGATGCTATAGAGAGTATGTTAAGAAGAGTGGAAAACGATGAAATAAGAAGATTAGGGTGTGATGAGGAGGGAATTGAATGTGCAATTTGTTTGGAGGAAATAAGTAGTGATAAAGAGGAGGAAGGAAGTGAGAAATCAGTGTTGCAAATGCCATGTTTGCATATGTTTCATGAAGAATGTATAGATAAATGGTTGAGGACAAGTCATTATTGCCCAACTTGTAGATTTTCAATGCCTACAAATAATTGA

Protein sequence

MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTHVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN
BLAST of CsaV3_7G007360 vs. NCBI nr
Match: XP_011659722.1 (PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus] >KGN43806.1 hypothetical protein Csa_7G068590 [Cucumis sativus])

HSP 1 Score: 546.2 bits (1406), Expect = 6.2e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           MFHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

BLAST of CsaV3_7G007360 vs. NCBI nr
Match: KGN43801.1 (hypothetical protein Csa_7G067560 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 2.2e-64
Identity = 142/280 (50.71%), Postives = 187/280 (66.79%), Query Frame = 0

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA QIF  C   +  ++GMSL+I D     H+ + +IRT  NS   V+ IDLNFKV+++C
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  THVLQEYEDGIMT-TTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHREL 120
            H  Q  E G  T  T+ L EH SS HPL T QLP+SIFK+G+ TL++ L      +R +
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IDITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINR------- 180
           I+I LV D II+HWVKKV+E+         N    VF++I+ LEIT+E+ + +       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG 240
               +++ P ++MVPTS+ A+ESML++VEN+EI + G D + I C ICLEEIS  KE++G
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFG-DNKSINCVICLEEIS--KEKKG 240

Query: 241 SEKSVLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           SE  VLQMPCLHMFHEECI KWL+ SHYCPTCRFSMPTNN
Sbjct: 241 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

BLAST of CsaV3_7G007360 vs. NCBI nr
Match: KGN43805.1 (hypothetical protein Csa_7G068580 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 9.2e-63
Identity = 138/270 (51.11%), Postives = 182/270 (67.41%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA +IFD C    ++GM L+I D      R + +IRTRRNS  + + IDLNF+VQL+C H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
             Q  E+    TT+ + EH  S HP AT++LPISI ++G+ TL+  L    H +R++I+I
Sbjct: 61  -FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEM---KINRRYVVESP 180
             + D II++WV KVEE         ++    VF+KI+ LEITLE+   +I R    +  
Sbjct: 121 EHLVDEIIKYWVTKVEEXXXXXXXXXSS---RVFKKIYRLEITLELLIFQIVRVMDYQPQ 180

Query: 181 VMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMP 240
           V++MVPTSD A+ESML+RVEN+EI +LG D++ I C ICLEEI   KEE+GSE  VLQMP
Sbjct: 181 VLMMVPTSDSAMESMLKRVENEEIMKLG-DDDCIHCVICLEEIG--KEEKGSEGVVLQMP 240

Query: 241 CLHMFHEECIDKWLRTSHYCPTCRFSMPTN 268
           CLH+FH ECI+KWL TSHYCPTCRF MP N
Sbjct: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

BLAST of CsaV3_7G007360 vs. NCBI nr
Match: KGN43800.1 (hypothetical protein Csa_7G067550 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 3.0e-61
Identity = 139/276 (50.36%), Postives = 181/276 (65.58%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA Q FD C +  ++GMSL+I D           I+TR NS   V+ IDLNFKV+++C H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
                ED    TT FL EH  +  P    QLP+SIFK+G+ TL++ L  +    R +I+I
Sbjct: 61  FQAGEEDTTFATT-FLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKI--------NRRY 180
            LV D+II+HWVKKVE      D++ENN    VF++I+ LEIT+E+ +          + 
Sbjct: 121 ELVTDQIIKHWVKKVE------DDKENNS--GVFEEIYPLEITIEVLVLQMIDAVDQPQE 180

Query: 181 VVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
            ++ P + MVPTSD A++SML+RVEN+EI ++G D + I C ICLE+IS  KEE+GSE  
Sbjct: 181 TIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVG-DYKSISCVICLEKIS--KEEKGSEGV 240

Query: 241 VLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLHMFHEECI KWL+TSHYCPTCRFSM  NN
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

BLAST of CsaV3_7G007360 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo])

HSP 1 Score: 241.1 bits (614), Expect = 4.3e-60
Identity = 136/276 (49.28%), Postives = 190/276 (68.84%), Query Frame = 0

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA +IF++C   +  ++GMSL+I D     H+   +I  + +S   VE I L FKVQL+C
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDP-NPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKC 60

Query: 61  THVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELI 120
            H  Q +E G   +T+ + EH  S H  AT+QLPISIFK+G+ TL++ L      + ++I
Sbjct: 61  QH-FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 DITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPV 180
           +I L+A+ II+HWV+KVEE+    +++ENN +  +F+KI+ LEI + + +++      P 
Sbjct: 121 NIELLANEIIKHWVRKVEEE----EDQENNSNV-LFKKIYPLEIMIRLLVSKMIRAVQPR 180

Query: 181 M------IMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
           +      +MVPTSD A+ESML+RVEN+EI + G D+E I C +CLEEIS  KEE+GSE +
Sbjct: 181 LAMIDQPLMVPTSDSAVESMLKRVENEEIMKSG-DDESINCVVCLEEIS--KEEKGSETT 240

Query: 241 VLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLHMFHEECI KWL+TSHYCPTCRFSMP +N
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

BLAST of CsaV3_7G007360 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 183 PTSDDAIESM-LRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHM 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

BLAST of CsaV3_7G007360 vs. TAIR10
Match: AT2G29840.1 (RING/U-box superfamily protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-10
Identity = 45/140 (32.14%), Postives = 66/140 (47.14%), Query Frame = 0

Query: 127 IIQHWVKKVEEDDCDHDEEENNEDFNVFQKIH-SLEITLEMKINRRYVVESPVMIMVPTS 186
           ++ HW+ + E  D DH  EE           H   E  L+   N     E+    + P S
Sbjct: 175 VLFHWLPRYEH-DFDHQTEE---------AFHPQFEQVLQASFN-----ETNTARLKPAS 234

Query: 187 DDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHMFHEE 246
             A+ES+ R+        +G   E   C+ICLEE      ++G  +S++ +PC H F +E
Sbjct: 235 KLAVESLNRKTYKKASDVVG---ENEMCSICLEEF-----DDG--RSIVALPCGHEFDDE 289

Query: 247 CIDKWLRTSHYCPTCRFSMP 266
           C  KW  T+H CP CRF +P
Sbjct: 295 CALKWFETNHDCPLCRFKLP 289

BLAST of CsaV3_7G007360 vs. TAIR10
Match: AT4G18110.1 (RING/U-box superfamily protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.8e-10
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 189 IESMLRRVENDEIRRLGCDEEGI------ECAICLEEISSDKEEEGSEKSVLQMPCLHMF 248
           +E +L  + +D +R    D +G       EC ICLEE++S     GSE+ ++++ C H F
Sbjct: 125 VEVVLETLYSDWLRVNDYDSQGCLIPIEEECIICLEELAS----SGSERRIMKLLCSHSF 184

Query: 249 HEECIDKWLRTSHYCPTCR 262
           H++CI  WLR    CPTCR
Sbjct: 185 HKDCILPWLRCKRSCPTCR 199

BLAST of CsaV3_7G007360 vs. TAIR10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3)

HSP 1 Score: 62.4 bits (150), Expect = 5.0e-10
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++  E  + R     ++  EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQ--ELPKFRLKAVPDDCGECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHMFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

BLAST of CsaV3_7G007360 vs. TAIR10
Match: AT5G60820.1 (RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 8.4e-10
Identity = 39/130 (30.00%), Postives = 67/130 (51.54%), Query Frame = 0

Query: 139 DCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMIMVPTSDDAIESM-LRRVE 198
           D DH EEE+ ED+     +H+ E  +  +      +  P     P S   I+++ +  + 
Sbjct: 310 DIDH-EEEDYEDY-----LHTTEYEMLFEAEISSGIGKP-----PASKSFIKNLKVSPLS 369

Query: 199 NDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHMFHEECIDKWLRTSHYC 258
           N+++  +  D++ + CA+C EE+   KE       V ++PC H +H ECI  WL   + C
Sbjct: 370 NEDV--MENDDDAVCCAVCKEEMIVGKE-------VAELPCRHKYHSECIVPWLGIRNTC 419

Query: 259 PTCRFSMPTN 268
           P CRF +P++
Sbjct: 430 PVCRFELPSD 419

BLAST of CsaV3_7G007360 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.0e-09
Identity = 32/87 (36.78%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 183 PTSDDAIESM-LRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHM 242
           P S  AI+++   +V  D ++      E  +CA+C++E      E+GS+  V QMPC H+
Sbjct: 190 PASKSAIDALPTVKVTKDMLK-----SEMNQCAVCMDEF-----EDGSD--VKQMPCKHV 249

Query: 243 FHEECIDKWLRTSHYCPTCRFSMPTNN 269
           FH++C+  WL   + CP CRF +PT++
Sbjct: 250 FHQDCLLPWLELHNSCPVCRFELPTDD 264

BLAST of CsaV3_7G007360 vs. Swiss-Prot
Match: sp|Q8GYT9|SIS3_ARATH (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 8.9e-09
Identity = 32/88 (36.36%), Postives = 47/88 (53.41%), Query Frame = 0

Query: 177 PVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQM 236
           P + + P   +A+E++++  E  + R     ++  EC ICLEE     E  G       +
Sbjct: 201 PGLYLTPAQTEAVEALIQ--ELPKFRLKAVPDDCGECLICLEEFHIGHEVRG-------L 260

Query: 237 PCLHMFHEECIDKWLRTSHYCPTCRFSM 265
           PC H FH ECID+WLR +  CP CR S+
Sbjct: 261 PCAHNFHVECIDQWLRLNVKCPRCRCSV 279

BLAST of CsaV3_7G007360 vs. Swiss-Prot
Match: sp|Q9LQX2|MPSR1_ARATH (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 41/97 (42.27%), Postives = 52/97 (53.61%), Query Frame = 0

Query: 171 RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSE 230
           R ++ES      P S  +I++M   VE D     GC  EG EC ICLEE         SE
Sbjct: 80  RSLLESREEGRPPASKASIDAM-PIVEID-----GC--EG-ECVICLEEWK-------SE 139

Query: 231 KSVLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTN 268
           ++V +MPC H FH  CI+KWL     CP CR+ MP +
Sbjct: 140 ETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

BLAST of CsaV3_7G007360 vs. Swiss-Prot
Match: sp|Q9C7I1|ATL34_ARATH (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 28/66 (42.42%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 200 EIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLHMFHEECIDKWLRTSHYCPT 259
           +++ L   + G+ECAICL E       E  E   L  PC H FH  CID WL +   CP 
Sbjct: 115 QVKGLKIGKGGVECAICLNEF------EDEETLRLMPPCSHAFHASCIDVWLSSRSTCPV 174

Query: 260 CRFSMP 266
           CR S+P
Sbjct: 175 CRASLP 174

BLAST of CsaV3_7G007360 vs. Swiss-Prot
Match: sp|Q7ZW78|RN181_DANRE (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 24/61 (39.34%), Postives = 37/61 (60.66%), Query Frame = 0

Query: 208 EEGIECAICLEEISSDKEEEGSEKSVLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTN 267
           ++G++C +CL E          ++SV +MPC H+FH  CI  WL  ++ CP CR  +PT+
Sbjct: 74  DKGVKCPVCLLEFE-------EQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTD 127

Query: 268 N 269
           N
Sbjct: 134 N 127

BLAST of CsaV3_7G007360 vs. TrEMBL
Match: tr|A0A0A0K7L5|A0A0A0K7L5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 4.1e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
           VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180
           TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPVMI 180

Query: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240
           MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH
Sbjct: 181 MVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMPCLH 240

Query: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           MFHEECIDKWLRTSHYCPTCRFSMPTNN
Sbjct: 241 MFHEECIDKWLRTSHYCPTCRFSMPTNN 268

BLAST of CsaV3_7G007360 vs. TrEMBL
Match: tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 142/280 (50.71%), Postives = 187/280 (66.79%), Query Frame = 0

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA QIF  C   +  ++GMSL+I D     H+ + +IRT  NS   V+ IDLNFKV+++C
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDP-DLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60

Query: 61  THVLQEYEDGIMT-TTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHREL 120
            H  Q  E G  T  T+ L EH SS HPL T QLP+SIFK+G+ TL++ L      +R +
Sbjct: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120

Query: 121 IDITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINR------- 180
           I+I LV D II+HWVKKV+E+         N    VF++I+ LEIT+E+ + +       
Sbjct: 121 INIELVVDEIIKHWVKKVDEE---------NSTSQVFEEIYPLEITIELLVYQMIHAIDQ 180

Query: 181 --RYVVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG 240
               +++ P ++MVPTS+ A+ESML++VEN+EI + G D + I C ICLEEIS  KE++G
Sbjct: 181 PHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFG-DNKSINCVICLEEIS--KEKKG 240

Query: 241 SEKSVLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           SE  VLQMPCLHMFHEECI KWL+ SHYCPTCRFSMPTNN
Sbjct: 241 SEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267

BLAST of CsaV3_7G007360 vs. TrEMBL
Match: tr|A0A0A0K2A5|A0A0A0K2A5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.1e-63
Identity = 138/270 (51.11%), Postives = 182/270 (67.41%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA +IFD C    ++GM L+I D      R + +IRTRRNS  + + IDLNF+VQL+C H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
             Q  E+    TT+ + EH  S HP AT++LPISI ++G+ TL+  L    H +R++I+I
Sbjct: 61  -FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEM---KINRRYVVESP 180
             + D II++WV KVEE         ++    VF+KI+ LEITLE+   +I R    +  
Sbjct: 121 EHLVDEIIKYWVTKVEEXXXXXXXXXSS---RVFKKIYRLEITLELLIFQIVRVMDYQPQ 180

Query: 181 VMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKSVLQMP 240
           V++MVPTSD A+ESML+RVEN+EI +LG D++ I C ICLEEI   KEE+GSE  VLQMP
Sbjct: 181 VLMMVPTSDSAMESMLKRVENEEIMKLG-DDDCIHCVICLEEIG--KEEKGSEGVVLQMP 240

Query: 241 CLHMFHEECIDKWLRTSHYCPTCRFSMPTN 268
           CLH+FH ECI+KWL TSHYCPTCRF MP N
Sbjct: 241 CLHVFHGECINKWLNTSHYCPTCRFPMPIN 263

BLAST of CsaV3_7G007360 vs. TrEMBL
Match: tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 2.0e-61
Identity = 139/276 (50.36%), Postives = 181/276 (65.58%), Query Frame = 0

Query: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60
           MA Q FD C +  ++GMSL+I D           I+TR NS   V+ IDLNFKV+++C H
Sbjct: 1   MAEQNFDDCTSGYYMGMSLRITDP----------IQTRSNSPTSVKQIDLNFKVEVKCQH 60

Query: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120
                ED    TT FL EH  +  P    QLP+SIFK+G+ TL++ L  +    R +I+I
Sbjct: 61  FQAGEEDTTFATT-FLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAIINI 120

Query: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKI--------NRRY 180
            LV D+II+HWVKKVE      D++ENN    VF++I+ LEIT+E+ +          + 
Sbjct: 121 ELVTDQIIKHWVKKVE------DDKENNS--GVFEEIYPLEITIEVLVLQMIDAVDQPQE 180

Query: 181 VVESPVMIMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
            ++ P + MVPTSD A++SML+RVEN+EI ++G D + I C ICLE+IS  KEE+GSE  
Sbjct: 181 TIDQPQVRMVPTSDSAMKSMLKRVENEEIMKVG-DYKSISCVICLEKIS--KEEKGSEGV 240

Query: 241 VLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLHMFHEECI KWL+TSHYCPTCRFSM  NN
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMTINN 254

BLAST of CsaV3_7G007360 vs. TrEMBL
Match: tr|E5GCQ3|E5GCQ3_CUCME (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.8e-60
Identity = 136/276 (49.28%), Postives = 190/276 (68.84%), Query Frame = 0

Query: 1   MAAQIFDMCM--NRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRC 60
           MA +IF++C   +  ++GMSL+I D     H+   +I  + +S   VE I L FKVQL+C
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDP-NPRHQPLNQI-DQTSSPTLVEQICLKFKVQLKC 60

Query: 61  THVLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELI 120
            H  Q +E G   +T+ + EH  S H  AT+QLPISIFK+G+ TL++ L      + ++I
Sbjct: 61  QH-FQVWEGGNGHSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 DITLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLEMKINRRYVVESPV 180
           +I L+A+ II+HWV+KVEE+    +++ENN +  +F+KI+ LEI + + +++      P 
Sbjct: 121 NIELLANEIIKHWVRKVEEE----EDQENNSNV-LFKKIYPLEIMIRLLVSKMIRAVQPR 180

Query: 181 M------IMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEGSEKS 240
           +      +MVPTSD A+ESML+RVEN+EI + G D+E I C +CLEEIS  KEE+GSE +
Sbjct: 181 LAMIDQPLMVPTSDSAVESMLKRVENEEIMKSG-DDESINCVVCLEEIS--KEEKGSETT 240

Query: 241 VLQMPCLHMFHEECIDKWLRTSHYCPTCRFSMPTNN 269
           VLQMPCLHMFHEECI KWL+TSHYCPTCRFSMP +N
Sbjct: 241 VLQMPCLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659722.16.2e-152100.00PREDICTED: uncharacterized protein LOC105436242 [Cucumis sativus] >KGN43806.1 hy... [more]
KGN43801.12.2e-6450.71hypothetical protein Csa_7G067560 [Cucumis sativus][more]
KGN43805.19.2e-6351.11hypothetical protein Csa_7G068580 [Cucumis sativus][more]
KGN43800.13.0e-6150.36hypothetical protein Csa_7G067550 [Cucumis sativus][more]
ADN34252.14.3e-6049.28hypothetical zinc finger protein [Cucumis melo subsp. melo][more]
Match NameE-valueIdentityDescription
AT3G19950.12.2e-1036.78RING/U-box superfamily protein[more]
AT2G29840.12.9e-1032.14RING/U-box superfamily protein[more]
AT4G18110.13.8e-1039.24RING/U-box superfamily protein[more]
AT3G47990.15.0e-1036.36SUGAR-INSENSITIVE 3[more]
AT5G60820.18.4e-1030.00RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q8LPN7|RNG1L_ARATH4.0e-0936.78E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
sp|Q8GYT9|SIS3_ARATH8.9e-0936.36E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV... [more]
sp|Q9LQX2|MPSR1_ARATH2.6e-0842.27E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ... [more]
sp|Q9C7I1|ATL34_ARATH3.4e-0842.42RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1[more]
sp|Q7ZW78|RN181_DANRE3.4e-0839.34E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
tr|A0A0A0K7L5|A0A0A0K7L5_CUCSA4.1e-152100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1[more]
tr|A0A0A0K7L0|A0A0A0K7L0_CUCSA1.5e-6450.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1[more]
tr|A0A0A0K2A5|A0A0A0K2A5_CUCSA6.1e-6351.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1[more]
tr|A0A0A0K2A1|A0A0A0K2A1_CUCSA2.0e-6150.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1[more]
tr|E5GCQ3|E5GCQ3_CUCME2.8e-6049.28Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
IPR001841Znf_RING
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G007360.1CsaV3_7G007360.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 213..260
e-value: 6.3E-9
score: 45.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 212..261
e-value: 6.0E-13
score: 48.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 213..261
score: 13.035
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 212..261
e-value: 8.7E-4
score: 16.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 176..267
e-value: 8.4E-18
score: 65.8
NoneNo IPR availablePANTHERPTHR14155:SF439GB|AAD18119.1coord: 95..262
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 95..262
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 212..265

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G007360Cucumber (Gy14) v2cgybcucB348
CsaV3_7G007360Cucumber (Gy14) v1cgycucB342
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0181
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0232
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0645
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0918
CsaV3_7G007360Cucurbita maxima (Rimu)cmacucB0959
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0158
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0629
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0910
CsaV3_7G007360Cucurbita moschata (Rifu)cmocucB0949
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0141
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0323
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0329
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0582
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0867
CsaV3_7G007360Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G007360Wild cucumber (PI 183967)cpicucB252
CsaV3_7G007360Wild cucumber (PI 183967)cpicucB415
CsaV3_7G007360Bottle gourd (USVL1VR-Ls)cuclsiB552
CsaV3_7G007360Bottle gourd (USVL1VR-Ls)cuclsiB554
CsaV3_7G007360Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G007360Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G007360Melon (DHL92) v3.5.1cucmeB569
CsaV3_7G007360Melon (DHL92) v3.5.1cucmeB585
CsaV3_7G007360Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G007360Melon (DHL92) v3.6.1cucmedB572
CsaV3_7G007360Watermelon (Charleston Gray)cucwcgB535
CsaV3_7G007360Watermelon (Charleston Gray)cucwcgB556
CsaV3_7G007360Watermelon (Charleston Gray)cucwcgB572
CsaV3_7G007360Watermelon (Charleston Gray)cucwcgB601
CsaV3_7G007360Watermelon (97103) v1cucwmB580
CsaV3_7G007360Watermelon (97103) v1cucwmB602
CsaV3_7G007360Watermelon (97103) v1cucwmB607
CsaV3_7G007360Watermelon (97103) v2cucwmbB537
CsaV3_7G007360Watermelon (97103) v2cucwmbB550
CsaV3_7G007360Watermelon (97103) v2cucwmbB581
CsaV3_7G007360Wax gourdcucwgoB674
CsaV3_7G007360Wax gourdcucwgoB686
CsaV3_7G007360Wax gourdcucwgoB699
CsaV3_7G007360Silver-seed gourdcarcucB0322
CsaV3_7G007360Silver-seed gourdcarcucB0413
CsaV3_7G007360Silver-seed gourdcarcucB0490
CsaV3_7G007360Silver-seed gourdcarcucB0769
CsaV3_7G007360Silver-seed gourdcarcucB0770