CsaV3_7G006960 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006960
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCysteine proteinase inhibitor
Locationchr7 : 4357991 .. 4358314 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

mRNA sequence

ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

Coding sequence (CDS)

ATGAGACGAAGTTCTTTTGTGAAAGTGAAGGGTTGTGATTGTTCAAGTAATAATTGGACACAAATCCCTATCGAAGACCCTTACTTGCAAGAAATTTCAAAGCTTGCTGTGAAAATACACAACAGTTCAGCTCAAGACAATTTGGAATACGATGGGATTTATGAAAGTTGGTATAAAAAATTGAATGACAACACCTTAGAGTATCGTTTTCTTCTCAAAGGAATCAACTATTTGGGACGTGTGAAGAACTATGAAGCTATTGTTCATGATGACATTGGTGCCACTCAAAAGAATACTAAGCTCCAATATAATCTTTCAACTTAA

Protein sequence

MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST
Homology
[Close]
BLAST of CsaV3_7G006960 vs. NCBI nr
Match: KGN43762.1 (hypothetical protein Csa_7G066200 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 4.4e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60
           MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK
Sbjct: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60

Query: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 108
           LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST
Sbjct: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 107

[Close]
BLAST of CsaV3_7G006960 vs. NCBI nr
Match: XP_022927698.1 (uncharacterized protein LOC111434515 [Cucurbita moschata])

HSP 1 Score: 69.3 bits (168), Expect = 9.0e-09
Identity = 30/85 (35.29%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 503 SIVLIVSHEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGQ 562

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++RF LK  ++LGRV++YEA+V
Sbjct: 563 DNIKFRFHLKAKDWLGRVRSYEAVV 587

[Close]
BLAST of CsaV3_7G006960 vs. NCBI nr
Match: XP_023530188.1 (uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-08
Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 0 

Query: 7   VKVKGCDCSS--NNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 66
           V  KGC        W +IP ++   LQ+++K AV+  N+   D L +D I+E WY +L  
Sbjct: 3   VSSKGCAQGEVVEKWIKIPDVKGHCLQQVAKFAVEKFNAEHGDCLIFDSIFEGWYLELGS 62

Query: 67  NTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           N L+YR  +K I++LGR+  YEA+V ++    ++  KL
Sbjct: 63  NNLKYRLHIKAIDFLGRLLIYEAVVFEEKPDKERIRKL 100

[Close]
BLAST of CsaV3_7G006960 vs. NCBI nr
Match: XP_023530867.1 (uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-08
Identity = 28/85 (32.94%), Postives = 53/85 (62.35%), Query Frame = 0 

Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 306 SIVLIVAPEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGK 365

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++R  LK  ++LGR+++YEA+V
Sbjct: 366 DNIKFRLHLKAKDWLGRIRSYEAVV 390

[Close]
BLAST of CsaV3_7G006960 vs. NCBI nr
Match: XP_023530959.1 (uncharacterized protein LOC111793346 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-08
Identity = 28/85 (32.94%), Postives = 53/85 (62.35%), Query Frame = 0 

Query: 5   SFVKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLND 64
           S V +   +     W +IP ++ P +QE++K AV  HN+ + + L+Y  +Y+ W+  L  
Sbjct: 306 SIVLIVAPEPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGK 365

Query: 65  NTLEYRFLLKGINYLGRVKNYEAIV 89
           + +++R  LK  ++LGR+++YEA+V
Sbjct: 366 DNIKFRLHLKAKDWLGRIRSYEAVV 390

[Close]
BLAST of CsaV3_7G006960 vs. TrEMBL
Match: tr|A0A0A0K639|A0A0A0K639_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G066200 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.9e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60
           MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK
Sbjct: 1   MRRSSFVKVKGCDCSSNNWTQIPIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKK 60

Query: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 108
           LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST
Sbjct: 61  LNDNTLEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKLQYNLST 107

[Close]
BLAST of CsaV3_7G006960 vs. TrEMBL
Match: tr|P94012|P94012_CUCMA (Cysteine proteinase inhibitor OS=Cucurbita maxima OX=3661 GN=PP1 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 0 

Query: 7   VKVKGCDCSSNNWTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNT 66
           VKV G   +   W +IP +    +QE++KLAV+  N     +L+YD I+E WY +L  N 
Sbjct: 5   VKVCGQVPAVEKWIKIPDVSGHCVQEVAKLAVEQFNVQHGHSLKYDSIHEGWYCELGQNN 64

Query: 67  LEYRFLLKGINYLGRVKNYEAIVHDDIGATQKNTKL 102
           L+YR  ++ I++L R   YEA+V ++    ++  KL
Sbjct: 65  LKYRLHIRAIDFLQRSLLYEALVFEEKPKLERIRKL 100

[Close]
BLAST of CsaV3_7G006960 vs. TrEMBL
Match: tr|Q7DMD5|Q7DMD5_CUCMA (Cysteine proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=cPC7 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-05
Identity = 26/72 (36.11%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 19  WTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNTLEYRFLLKGINY 78
           W +I  ++  +LQE+SK A+   N  + D+L +DGIY+ WY ++  + +++R  L+  + 
Sbjct: 327 WIKISNLQFAFLQEVSKFALDDFNVKSGDSLRFDGIYDGWYMEMGQDNIKFRIHLRAKDC 386

Query: 79  LGRVKNYEAIVH 90
           L RV +YEA V+
Sbjct: 387 LSRVHHYEAYVY 398

[Close]
BLAST of CsaV3_7G006960 vs. TrEMBL
Match: tr|A0A0A0K3W6|A0A0A0K3W6_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-05
Identity = 28/85 (32.94%), Postives = 48/85 (56.47%), Query Frame = 0 

Query: 19  WTQIP-IEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWYKKLNDNTLEYRFLLKGINY 78
           W +IP ++   +Q+ +K AV  HN    D L YD   E WY ++N   + ++  +K    
Sbjct: 109 WIKIPDVKKSCVQDCAKWAVTEHNKITHDYLAYDSTVEGWYHEVNPFVIIFKLHIKAKEC 168

Query: 79  LGRVKNYEAIVHDDIGATQKNTKLQ 103
           +GRV++Y A+V ++   T+K  KL+
Sbjct: 169 IGRVRDYIAVVKEEKPLTEKIKKLE 193

[Close]
BLAST of CsaV3_7G006960 vs. TrEMBL
Match: tr|A0A1S3BHQ3|A0A1S3BHQ3_CUCME (Cysteine proteinase inhibitor OS=Cucumis melo OX=3656 GN=LOC103489701 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.4e-04
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = 0 

Query: 19  WTQI-PIEDPYLQEISKLAVKIHNSSAQDNLEYDGIYESWY--KKLNDNTLEYRFLLKGI 78
           W +I  + +P++QEI+K AV+ HN    DNL Y  I E WY    +   TL ++  LK  
Sbjct: 110 WIKIHNVTEPHVQEIAKFAVEEHNKITHDNLIYICIIEGWYHVSTIPPVTL-WKLHLKAK 169

Query: 79  NYLGRVKNYEAIVHDD 92
           + LGRV+ YEA+V ++
Sbjct: 170 DCLGRVREYEALVKEE 184

The following BLAST results are available for this feature:
BLAST of CsaV3_7G006960 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43762.14.4e-56100.00hypothetical protein Csa_7G066200 [Cucumis sativus][more]
XP_022927698.19.0e-0935.29uncharacterized protein LOC111434515 [Cucurbita moschata][more]
XP_023530188.11.5e-0836.73uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo][more]
XP_023530867.17.6e-0832.94uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo][more]
XP_023530959.17.6e-0832.94uncharacterized protein LOC111793346 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_7G006960 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006960 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K639|A0A0A0K639_CUCSA2.9e-56100.00Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G066200 PE=3 SV... [more]
tr|P94012|P94012_CUCMA1.1e-0736.46Cysteine proteinase inhibitor OS=Cucurbita maxima OX=3661 GN=PP1 PE=3 SV=1[more]
tr|Q7DMD5|Q7DMD5_CUCMA1.0e-0536.11Cysteine proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=cPC7 PE=... [more]
tr|A0A0A0K3W6|A0A0A0K3W6_CUCSA1.4e-0532.94Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=3 SV... [more]
tr|A0A1S3BHQ3|A0A1S3BHQ3_CUCME3.4e-0440.79Cysteine proteinase inhibitor OS=Cucumis melo OX=3656 GN=LOC103489701 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004869cysteine-type endopeptidase inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR027214Cystatin
IPR009994PP1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006960.1CsaV3_7G006960.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 16..105
e-value: 5.5E-7
score: 31.4
NoneNo IPR availablePANTHERPTHR11413:SF65CYSTEINE PROTEINASE INHIBITOR 5coord: 12..92
NoneNo IPR availableSUPERFAMILYSSF54403Cystatin/monellincoord: 18..95
IPR009994Phloem filament PP1PFAMPF07430PP1coord: 28..99
e-value: 1.2E-17
score: 63.7
IPR027214CystatinPANTHERPTHR11413CYSTATIN FAMILY MEMBERcoord: 12..92

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G006960CSPI07G06000Wild cucumber (PI 183967)cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G006960Silver-seed gourdcarcucB0321
CsaV3_7G006960Silver-seed gourdcarcucB0323
CsaV3_7G006960Silver-seed gourdcarcucB0770
CsaV3_7G006960Cucumber (Gy14) v2cgybcucB348
CsaV3_7G006960Cucumber (Gy14) v1cgycucB342
CsaV3_7G006960Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G006960Cucurbita maxima (Rimu)cmacucB0180
CsaV3_7G006960Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G006960Cucurbita maxima (Rimu)cmacucB0644
CsaV3_7G006960Cucurbita moschata (Rifu)cmocucB0157
CsaV3_7G006960Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G006960Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G006960Cucurbita moschata (Rifu)cmocucB0630
CsaV3_7G006960Cucurbita pepo (Zucchini)cpecucB0323
CsaV3_7G006960Cucurbita pepo (Zucchini)cpecucB0328
CsaV3_7G006960Cucurbita pepo (Zucchini)cpecucB0866
CsaV3_7G006960Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G006960Wild cucumber (PI 183967)cpicucB252
CsaV3_7G006960Bottle gourd (USVL1VR-Ls)cuclsiB551
CsaV3_7G006960Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G006960Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G006960Melon (DHL92) v3.5.1cucmeB585
CsaV3_7G006960Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G006960Melon (DHL92) v3.6.1cucmedB572
CsaV3_7G006960Watermelon (Charleston Gray)cucwcgB535
CsaV3_7G006960Watermelon (97103) v1cucwmB580
CsaV3_7G006960Watermelon (97103) v1cucwmB587
CsaV3_7G006960Watermelon (97103) v1cucwmB596
CsaV3_7G006960Watermelon (97103) v2cucwmbB581
CsaV3_7G006960Wax gourdcucwgoB686
CsaV3_7G006960Wax gourdcucwgoB700