CsaV3_7G006930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G006930
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 4313298 .. 4313757 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCACTGTCAAAGCTTTGTACCCTCGTACCCGTCGTGTCTCACCACTCCCCCCACCATCTGACTACTCCCATTTTATCTTATTTTCTCGTAATTCCCGCTCTCTTTTCTATTCTTAACTCTCTCTCTCAATCAGATCAGATCCTCTAATTCTGGCTCTGGGCCTCTCTTCTTATTCATTTACTGGGCCTCCAAGCCCACCCTTACTTTTCACCTTCATCAGAAGCAGCCTAACCTCTGATGCCACAAACCTCTTTCAGTGCGACTGCCATGGGAGTGCATGGCCTCCTTCTCTGCTCAATCTTCAAAAGATTGATGAGGGTGTTTACGCCAAGGTTAAGTTAGAGTTTGAATTAATGTGTGTGTGTGTTTGGGATTTAGTAGTAAAAAACTTGGATGTTGATCTCTTTATGGTTGGTTGGAGGTTGTTTGACTTGACTACTACTGCTTGCATTTGA

mRNA sequence

ATGTATCACTGTCAAAGCTTTGTACCCTCATCAGATCCTCTAATTCTGGCTCTGGGCCTCTCTTCTTATTCATTTACTGGGCCTCCAAGCCCACCCTTACTTTTCACCTTCATCAGAAGCAGCCTAACCTCTGATGCCACAAACCTCTTTCAGTGCGACTGCCATGGGAGTGCATGGCCTCCTTCTCTGCTCAATCTTCAAAAGATTGATGAGGGTGTTTACGCCAAGGTTAAGTTAGAGTTTGAATTAATGTGTGTGTGTGTTTGGGATTTAGTAGTAAAAAACTTGGATGTTGATCTCTTTATGGTTGGTTGGAGGTTGTTTGACTTGACTACTACTGCTTGCATTTGA

Coding sequence (CDS)

ATGTATCACTGTCAAAGCTTTGTACCCTCATCAGATCCTCTAATTCTGGCTCTGGGCCTCTCTTCTTATTCATTTACTGGGCCTCCAAGCCCACCCTTACTTTTCACCTTCATCAGAAGCAGCCTAACCTCTGATGCCACAAACCTCTTTCAGTGCGACTGCCATGGGAGTGCATGGCCTCCTTCTCTGCTCAATCTTCAAAAGATTGATGAGGGTGTTTACGCCAAGGTTAAGTTAGAGTTTGAATTAATGTGTGTGTGTGTTTGGGATTTAGTAGTAAAAAACTTGGATGTTGATCTCTTTATGGTTGGTTGGAGGTTGTTTGACTTGACTACTACTGCTTGCATTTGA

Protein sequence

MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWPPSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI
Homology
[Close]
BLAST of CsaV3_7G006930 vs. NCBI nr
Match: KGN43760.1 (hypothetical protein Csa_7G065190 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP 60
           MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP
Sbjct: 1   MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP 60

Query: 61  PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI 117
           PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI
Sbjct: 61  PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI 116

[Close]
BLAST of CsaV3_7G006930 vs. TrEMBL
Match: tr|A0A0A0K255|A0A0A0K255_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G065190 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP 60
           MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP
Sbjct: 1   MYHCQSFVPSSDPLILALGLSSYSFTGPPSPPLLFTFIRSSLTSDATNLFQCDCHGSAWP 60

Query: 61  PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI 117
           PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI
Sbjct: 61  PSLLNLQKIDEGVYAKVKLEFELMCVCVWDLVVKNLDVDLFMVGWRLFDLTTTACI 116

The following BLAST results are available for this feature:
BLAST of CsaV3_7G006930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43760.11.7e-61100.00hypothetical protein Csa_7G065190 [Cucumis sativus][more]
BLAST of CsaV3_7G006930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G006930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K255|A0A0A0K255_CUCSA1.1e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G065190 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G006930.1CsaV3_7G006930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G006930CsGy7G005630Cucumber (Gy14) v2cgybcucB348
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G006930Silver-seed gourdcarcucB0321
CsaV3_7G006930Silver-seed gourdcarcucB0323
CsaV3_7G006930Silver-seed gourdcarcucB0770
CsaV3_7G006930Cucumber (Gy14) v1cgycucB342
CsaV3_7G006930Cucurbita maxima (Rimu)cmacucB0171
CsaV3_7G006930Cucurbita maxima (Rimu)cmacucB0180
CsaV3_7G006930Cucurbita maxima (Rimu)cmacucB0639
CsaV3_7G006930Cucurbita maxima (Rimu)cmacucB0644
CsaV3_7G006930Cucurbita moschata (Rifu)cmocucB0157
CsaV3_7G006930Cucurbita moschata (Rifu)cmocucB0160
CsaV3_7G006930Cucurbita moschata (Rifu)cmocucB0623
CsaV3_7G006930Cucurbita moschata (Rifu)cmocucB0630
CsaV3_7G006930Cucurbita pepo (Zucchini)cpecucB0323
CsaV3_7G006930Cucurbita pepo (Zucchini)cpecucB0328
CsaV3_7G006930Cucurbita pepo (Zucchini)cpecucB0866
CsaV3_7G006930Cucurbita pepo (Zucchini)cpecucB0868
CsaV3_7G006930Wild cucumber (PI 183967)cpicucB415
CsaV3_7G006930Bottle gourd (USVL1VR-Ls)cuclsiB551
CsaV3_7G006930Bottle gourd (USVL1VR-Ls)cuclsiB555
CsaV3_7G006930Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G006930Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G006930Watermelon (Charleston Gray)cucwcgB535
CsaV3_7G006930Watermelon (Charleston Gray)cucwcgB552
CsaV3_7G006930Watermelon (97103) v1cucwmB580
CsaV3_7G006930Watermelon (97103) v1cucwmB596
CsaV3_7G006930Watermelon (97103) v2cucwmbB581
CsaV3_7G006930Watermelon (97103) v2cucwmbB598
CsaV3_7G006930Wax gourdcucwgoB686
CsaV3_7G006930Wax gourdcucwgoB700