CsaV3_7G005860 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G005860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 3530501 .. 3530650 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGACAATGCCTGTACGCAGGTTGA

mRNA sequence

ATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGACAATGCCTGTACGCAGGTTGA

Coding sequence (CDS)

ATGGAGAAGGTGAAGAAGGAGGGTGTGGTGGAAGGTGGAAAATATGATGAGTACAAGAAGAGGAAAGGAACAATAATTGGTGGTGGCAGTGGCTCCGGTTACAAAAGGGAGTGGAACACAGATGAAGGACAATGCCTGTACGCAGGTTGA

Protein sequence

MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG
Homology
[Close]
BLAST of CsaV3_7G005860 vs. NCBI nr
Match: KGN43646.1 (hypothetical protein Csa_7G049280 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 50
          MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG
Sbjct: 1  MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 49

[Close]
BLAST of CsaV3_7G005860 vs. TrEMBL
Match: tr|A0A0A0K744|A0A0A0K744_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049280 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 50
          MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG
Sbjct: 1  MEKVKKEGVVEGGKYDEYKKRKGTIIGGGSGSGYKREWNTDEGQCLYAG 49

The following BLAST results are available for this feature:
BLAST of CsaV3_7G005860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43646.11.5e-19100.00hypothetical protein Csa_7G049280 [Cucumis sativus][more]
BLAST of CsaV3_7G005860 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G005860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G005860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K744|A0A0A0K744_CUCSA1.0e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G049280 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G005860.1CsaV3_7G005860.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G005860CSPI07G04940Wild cucumber (PI 183967)cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G005860Watermelon (97103) v1cucwmB614
CsaV3_7G005860Watermelon (97103) v1cucwmB624
CsaV3_7G005860Watermelon (97103) v2cucwmbB574
CsaV3_7G005860Wax gourdcucwgoB690
CsaV3_7G005860Cucumber (Gy14) v2cgybcucB348
CsaV3_7G005860Cucurbita maxima (Rimu)cmacucB0172
CsaV3_7G005860Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G005860Cucurbita maxima (Rimu)cmacucB0643
CsaV3_7G005860Cucurbita maxima (Rimu)cmacucB0686
CsaV3_7G005860Cucurbita maxima (Rimu)cmacucB0768
CsaV3_7G005860Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G005860Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G005860Cucurbita moschata (Rifu)cmocucB0628
CsaV3_7G005860Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G005860Cucurbita pepo (Zucchini)cpecucB0327
CsaV3_7G005860Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G005860Bottle gourd (USVL1VR-Ls)cuclsiB534
CsaV3_7G005860Bottle gourd (USVL1VR-Ls)cuclsiB537
CsaV3_7G005860Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G005860Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G005860Watermelon (Charleston Gray)cucwcgB562
CsaV3_7G005860Watermelon (Charleston Gray)cucwcgB597