CsaV3_7G005570 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGTATTATTCATTTTTCTCTATTTTATCAAAATTTGGGATCTTCTTTTGACGAGGAAGAAATTCGATCACTCTTTTATAATTACATTTCAAAATTATTTTCAAGATACAATTAAAATTTAAAAGCTTGAAAAAGTAGTTTCTAAAACTTTTTATAATAAAAAAACATTAGTTAATAATTCAAATGTCTTTGTAAGAATGGTGAGACAATTATTATAGAAATGGAGAATACGTGTGATTCATTTCAAATTTAAAGAAACAATAATGATTAACCTTTTTTTGTTACTTTGATTTAAAAAAAGTTTGATTTGTGAAATGAATGAAAAATATTTGGATGTGTGTAATCAAAATTGGCCGAATGACAAATTTTTGAAAAAGATTGTAATTGAAGGAAATGCGTAGAAAAACCGATACAGGTTATAGTTGCATCCAATTATTGCATGTAATGTATTTCATGGACTTCGAAAAAGTAGAGTTTCAACAAGTTAGGATGTATATTCTCAATTAGTTCTGTTACTATTTGTTTCTCTACATGTGGAGTTTGGGAAGAATACTTCATAATAGATATAGCCCCACCCCCCACTAATATTTTAGAGAGGCTTCACTTATCATCTCTAGACCCTACCATTTTTGAGACCTAAAAAAATGTCTTCAATTTTCTTTCTTTCTTTCTTTCTTTTCTGATAAACTAAGTCTTTATCACTAGGACCATCCCTTAGGAAATTGTGATATTAATTTAACCAAGAAGAAGAAGAAGAAGATGATGATGATGATTTATTAGCCTTCTTTGCAAATTGTTGATTATTTTTACAAATGCTCGTGCCTTTTAAATTTATTATTTCACAAATTTCCATTCTTAAATAATTGCAAAATATTAATGATTGTAATTTAAATAATAATTAGTAAAGCCCCTTATTTGTAGTTCACTAAAATAATTTGAACACTCCAAAATAGTCCTATCCAAATTATTGTTGAAATTCATGAGAAAAGAAAAATATTTAATTATTTTTCTATTTTTTTATGAAAATGTATATTTAAATCAATGGATTAGTCTAAAGCCAACTAAGCAAACTTGATTGATTGAAATAATTAAAAAATTTCTCTGGGTCAATAATAATAAATTAAGTCGAAGCAAATTATAAAGTCAGAATGTTGTTTCTTATAATTAAGAGAAAGAAAATCAATGTGGGAAGATGTTGACTTTGAGTTATAAGAACTTTATGCATAATTTGTTTTTAATATAGGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA ATGGCAACGTCGCTTGGAGGCACACACCTTGGCTTGGCTCTCACGCGCGCTAAGGGCGCCGTTCGCCCTCTCCGCCGTGCTTTTCAGGCAAGTCTCCAATATCCAGGATTGGATCCTCTAGCAATTTCAGAAGTATTCTCTCCAGCTCAGTACATGGGAGAGAAACAAATCATGGCCATTGATTGTTTCGTATTGAAATTATCAGCCGACCAAACTGATCTTGCTGATCGAAGCGACAACACAGCTGAGATGATCAAGCATGCAATCTACGGTTACTTTTGTCAAAGACGTGGACTTTTGGTCTACTTAGAGGACTCCTCATTGACTCGAATTCAATCTCCTGGTTCTCACCCCATGTACTGGGAAACAACCATGTCAACAAAAATCGACGATTATCGAACAATTGACGGTGTTATGATTGCCCACTCTGGTGAGACCGATGTCATCATCACACGCTTTGGAGATGATCTTAAAACCGGCCCTATGATCACGCGATTGCAAGAGATTTGGAGTATTGATGACGTGGCGTTTAATGTTCCAGGATTGTCTATGGATAGTTTTATCCCACCTAAACAAGTTCAAAAGAATTGA MATSLGGTHLGLALTRAKGAVRPLRRAFQASLQYPGLDPLAISEVFSPAQYMGEKQIMAIDCFVLKLSADQTDLADRSDNTAEMIKHAIYGYFCQRRGLLVYLEDSSLTRIQSPGSHPMYWETTMSTKIDDYRTIDGVMIAHSGETDVIITRFGDDLKTGPMITRLQEIWSIDDVAFNVPGLSMDSFIPPKQVQKN
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_004136553.1 (PREDICTED: uncharacterized protein LOC101217417 [Cucumis sativus] >KGN59268.1 hypothetical protein Csa_3G797570 [Cucumis sativus]) HSP 1 Score: 351.3 bits (900), Expect = 2.2e-93 Identity = 174/180 (96.67%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_008443008.1 (PREDICTED: uncharacterized protein LOC103486737 [Cucumis melo]) HSP 1 Score: 345.9 bits (886), Expect = 9.0e-92 Identity = 169/180 (93.89%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_023540199.1 (uncharacterized protein LOC111800643 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.9 bits (860), Expect = 9.4e-89 Identity = 162/180 (90.00%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_022942787.1 (uncharacterized protein LOC111447715 [Cucurbita moschata]) HSP 1 Score: 334.0 bits (855), Expect = 3.6e-88 Identity = 161/180 (89.44%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. NCBI nr
Match: XP_023005947.1 (uncharacterized protein LOC111498804 [Cucurbita maxima]) HSP 1 Score: 332.8 bits (852), Expect = 7.9e-88 Identity = 161/180 (89.44%), Postives = 169/180 (93.89%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR10
Match: AT5G06610.1 (Protein of unknown function (DUF620)) HSP 1 Score: 238.8 bits (608), Expect = 2.8e-63 Identity = 116/180 (64.44%), Postives = 146/180 (81.11%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR10
Match: AT3G19540.1 (Protein of unknown function (DUF620)) HSP 1 Score: 189.1 bits (479), Expect = 2.6e-48 Identity = 89/178 (50.00%), Postives = 126/178 (70.79%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR10
Match: AT1G27690.1 (Protein of unknown function (DUF620)) HSP 1 Score: 188.3 bits (477), Expect = 4.4e-48 Identity = 89/178 (50.00%), Postives = 124/178 (69.66%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR10
Match: AT1G79420.1 (Protein of unknown function (DUF620)) HSP 1 Score: 187.6 bits (475), Expect = 7.5e-48 Identity = 99/191 (51.83%), Postives = 125/191 (65.45%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TAIR10
Match: AT1G49840.1 (Protein of unknown function (DUF620)) HSP 1 Score: 181.8 bits (460), Expect = 4.1e-46 Identity = 85/178 (47.75%), Postives = 124/178 (69.66%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TrEMBL
Match: tr|A0A0A0LBR2|A0A0A0LBR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797570 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 1.4e-93 Identity = 174/180 (96.67%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TrEMBL
Match: tr|A0A1S3B7U5|A0A1S3B7U5_CUCME (uncharacterized protein LOC103486737 OS=Cucumis melo OX=3656 GN=LOC103486737 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 6.0e-92 Identity = 169/180 (93.89%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TrEMBL
Match: tr|W9QKK8|W9QKK8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014048 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 8.7e-75 Identity = 139/191 (72.77%), Postives = 163/191 (85.34%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TrEMBL
Match: tr|M5VPR7|M5VPR7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G085100 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74 Identity = 138/185 (74.59%), Postives = 160/185 (86.49%), Query Frame = 0
BLAST of CsaV3_7G005570 vs. TrEMBL
Match: tr|A0A251N8L8|A0A251N8L8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G085100 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74 Identity = 138/185 (74.59%), Postives = 160/185 (86.49%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |