CsaV3_7G003990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAATTCTTGTTTGCAACTCATTTTGTCTTCTCCATCTTCTTCCTTCTTCCAATTCTTCACATTCTCCATTTGCATTTCTACTTTGTTCTTTATTTCCCACTTTCTTCTTTATAAATTTTGTTTCCCCATCGAATTTCAATTTCCTTCAACCGTCGATCACACCGTATTCCGAAATTTCCCACTATGAGTCTTCAACCTACACGATCGGAGTTGGAATCTACTGTTCTTGACGGCATCAGTCCTAATGCCGTCGTTCAAATCCAACCGTCGTCACCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCTCAGCGGAGAATCGCTATCGCTGTTGATTTGAGCGATGAGAGTGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCTGGTGATTTGGTGTTTTTTCTTCACGTTCAGCCTACAAGCGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGGAATAGCAGCAGCGACGAGGTAAGCGCTGAAGAAACGCAACGAAAGATGGAAGATGATTTCGATAATTTCACTACGACCAAGGCTGCTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCATGACATGAAGGAAAGACTCTGCCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGTTTTGGCGCCTCAAAGCGAATTACTAAGGGCCGACTTGGAAGTGTTAGCGATTACTGCGTTCACCATTGTGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGACAAGGATGGTTCTCGTCATGGAGATGCTGAAGCCGGCGGCTCGGTGAAGAGTATTATTAGGGAGGAAGTGGAGCTTGATCCAGTGCCTGAAGATGAGCAGGAGTATCATGATGGTGACGAGGAGGTCAAAGGTTCGAGTTCTTGACATTATTTATCTCAATCTTGTGGGTTCATTTTGTGTTATGTTTGTGTTTGGGTATATATTTTTTGCTCGTCAATTGCTTGATCCTTATGCGCCTTTTACCTGAGATTGGATCTTTCCATCTCTCTGTTCATCATTAGATTCTCTTTTTTTTTTTTTTTTTTCCTGTTGGAAAATAGATTGTATCTATTGATTAGATTTCTGGGTGGTGAGGGTGATGTATTGCAGTCTTTTCATTGGCCATTTCCAAAGAGTCTGTTCATAATTTCCTGGACTTCCATGGAGTAGTTTGCTTGGAATTTAGAATATCAAATAGCATTTCACTTGAAGGTTAGAAATCTGTCCCAAATCTGTCTTTTTCCCCCAACTAGTAAGTGATTTGTTTGATGTTTGTTATAAGCAGAGTTGAAGGGGACATCAGGGAAATTATGGACCAGCTAATCATAGACTCCCATTTTTGGTCATTGTTTTAGAGACTTCTAGATATATCTAGGACTTGTCAATTATGAATTTAGAAATTCAGATATAAATTATGGTTTGTTTGTTCGTTTGACTTTCCTTTTAAGAACGGATTGAAAATTCGAAGTATAGTTTTTTTTATATCTAGTTTCTTGAATGATAGTTTGCAGTTCTTATAAATGTTACATAGCCCTGTATAATAAGATTCGTCTGTTGTCTTTCCTCTTGAGCAGATGATTAAATGAGGTGAATGGTTGTTTGTGGCTGGTAGTCTGTTCATGTAAGCTAAATTTCAATTGAAATTTGACTTCTTGGCAACTAAGTGATTGTAATTTGTTTTTTAATATGTAGTATATGTTAGGGTAAACTCTGATTTGAGCACATTTGATTGTGTGTTATAGTCTGTTTTCAGGCCTAAAATTCTGCATTATTTAGCAATAATCACTAAGAACTCTGACATGCTTGAACTTTTTTTAATACAGAAACTGTACAGGTGACAAAGGTAGAGAAGATTGCTGAGTGAATTGAGTTGACTTGAAGAGTTTGTTGTTTGTACATGATGAAAATATTTCATATCTTTTGTTGGAAGAACAAAAACCTTTATGGTTAGAGATTTCCATTTTCCATTTGTACATGGTGAAAAAGTATTTCATATCCTCCGTTTGAAGAACAAAAAACTGTATGCTCAGATATTAGTTTCTATTTGTGTAATGTTCTTCTCACACTCTACTTTTCATATATAACAGTGCAT ATGAGTCTTCAACCTACACGATCGGAGTTGGAATCTACTGTTCTTGACGGCATCAGTCCTAATGCCGTCGTTCAAATCCAACCGTCGTCACCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCTCAGCGGAGAATCGCTATCGCTGTTGATTTGAGCGATGAGAGTGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCTGGTGATTTGGTGTTTTTTCTTCACGTTCAGCCTACAAGCGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGGAATAGCAGCAGCGACGAGGTAAGCGCTGAAGAAACGCAACGAAAGATGGAAGATGATTTCGATAATTTCACTACGACCAAGGCTGCTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCATGACATGAAGGAAAGACTCTGCCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGTTTTGGCGCCTCAAAGCGAATTACTAAGGGCCGACTTGGAAGTGTTAGCGATTACTGCGTTCACCATTGTGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGACAAGGATGGTTCTCGTCATGGAGATGCTGAAGCCGGCGGCTCGGTGAAGAGTATTATTAGGGAGGAAGTGGAGCTTGATCCAGTGCCTGAAGATGAGCAGGAGTATCATGATGGTGACGAGGAGGTCAAAGAAACTGTACAGGTGACAAAGGTAGAGAAGATTGCTGAGTGA ATGAGTCTTCAACCTACACGATCGGAGTTGGAATCTACTGTTCTTGACGGCATCAGTCCTAATGCCGTCGTTCAAATCCAACCGTCGTCACCGGGTTCCTTTTTATCACCGCGTCATTCATTGGATTCTCAGCGGAGAATCGCTATCGCTGTTGATTTGAGCGATGAGAGTGCATACGCCGTCCGTTGGGCTGTTCAGAACTATCTCCGTCCTGGTGATTTGGTGTTTTTTCTTCACGTTCAGCCTACAAGCGTTCTTTATGGAGCTGATTGGGGATCAGTTGACCTTCATCAAAGGAATAGCAGCAGCGACGAGGTAAGCGCTGAAGAAACGCAACGAAAGATGGAAGATGATTTCGATAATTTCACTACGACCAAGGCTGCTGACTTGGCTCAACCTTTAGTGGAGGCTAATATTCCTTTCAAGATTCACATAGTCAAAGACCATGACATGAAGGAAAGACTCTGCCTCGAAGTTGAACGATTAGGGCTTAGTGCTGTTATCATGGGGAGCAGAGGTTTTGGCGCCTCAAAGCGAATTACTAAGGGCCGACTTGGAAGTGTTAGCGATTACTGCGTTCACCATTGTGTGTGTCCGGTGGTGGTGGTTAGGTATCCGGATGACAAGGATGGTTCTCGTCATGGAGATGCTGAAGCCGGCGGCTCGGTGAAGAGTATTATTAGGGAGGAAGTGGAGCTTGATCCAGTGCCTGAAGATGAGCAGGAGTATCATGATGGTGACGAGGAGGTCAAAGAAACTGTACAGGTGACAAAGGTAGAGAAGATTGCTGAGTGA MSLQPTRSELESTVLDGISPNAVVQIQPSSPGSFLSPRHSLDSQRRIAIAVDLSDESAYAVRWAVQNYLRPGDLVFFLHVQPTSVLYGADWGSVDLHQRNSSSDEVSAEETQRKMEDDFDNFTTTKAADLAQPLVEANIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGASKRITKGRLGSVSDYCVHHCVCPVVVVRYPDDKDGSRHGDAEAGGSVKSIIREEVELDPVPEDEQEYHDGDEEVKETVQVTKVEKIAE
BLAST of CsaV3_7G003990 vs. NCBI nr
Match: XP_004144481.1 (PREDICTED: uncharacterized protein LOC101217371 isoform X1 [Cucumis sativus] >KGN43566.1 hypothetical protein Csa_7G045550 [Cucumis sativus]) HSP 1 Score: 523.9 bits (1348), Expect = 3.3e-145 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. NCBI nr
Match: XP_008455370.1 (PREDICTED: uncharacterized protein LOC103495556 isoform X1 [Cucumis melo]) HSP 1 Score: 506.1 bits (1302), Expect = 7.0e-140 Identity = 255/264 (96.59%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. NCBI nr
Match: XP_011658728.1 (PREDICTED: uncharacterized protein LOC101217371 isoform X2 [Cucumis sativus]) HSP 1 Score: 503.4 bits (1295), Expect = 4.6e-139 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. NCBI nr
Match: XP_011658729.1 (PREDICTED: uncharacterized protein LOC101217371 isoform X3 [Cucumis sativus]) HSP 1 Score: 502.3 bits (1292), Expect = 1.0e-138 Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. NCBI nr
Match: XP_008455371.1 (PREDICTED: uncharacterized protein LOC103495556 isoform X2 [Cucumis melo]) HSP 1 Score: 493.0 bits (1268), Expect = 6.2e-136 Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TAIR10
Match: AT1G11360.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 282.7 bits (722), Expect = 2.3e-76 Identity = 151/233 (64.81%), Postives = 177/233 (75.97%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TAIR10
Match: AT4G27320.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 238.0 bits (606), Expect = 6.5e-63 Identity = 113/168 (67.26%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TAIR10
Match: AT5G54430.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 231.5 bits (589), Expect = 6.1e-61 Identity = 112/167 (67.07%), Postives = 137/167 (82.04%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TAIR10
Match: AT3G21210.1 (zinc ion binding) HSP 1 Score: 156.4 bits (394), Expect = 2.5e-38 Identity = 94/203 (46.31%), Postives = 116/203 (57.14%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TAIR10
Match: AT1G09740.1 (Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 73.6 bits (179), Expect = 2.1e-13 Identity = 58/167 (34.73%), Postives = 83/167 (49.70%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. Swiss-Prot
Match: sp|Q8L4N1|PHO34_ARATH (Universal stress protein PHOS34 OS=Arabidopsis thaliana OX=3702 GN=PHOS34 PE=1 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.2e-61 Identity = 113/168 (67.26%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. Swiss-Prot
Match: sp|Q8VYN9|PHO32_ARATH (Universal stress protein PHOS32 OS=Arabidopsis thaliana OX=3702 GN=PHOS32 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 1.1e-59 Identity = 112/167 (67.07%), Postives = 137/167 (82.04%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. Swiss-Prot
Match: sp|Q8LGG8|USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g01520 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05 Identity = 26/71 (36.62%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TrEMBL
Match: tr|A0A0A0K6Y1|A0A0A0K6Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045550 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 2.2e-145 Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TrEMBL
Match: tr|A0A1S3C0B5|A0A1S3C0B5_CUCME (uncharacterized protein LOC103495556 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 506.1 bits (1302), Expect = 4.7e-140 Identity = 255/264 (96.59%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TrEMBL
Match: tr|A0A1S3C0W6|A0A1S3C0W6_CUCME (uncharacterized protein LOC103495556 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 4.1e-136 Identity = 247/252 (98.02%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TrEMBL
Match: tr|A0A1S3C0R7|A0A1S3C0R7_CUCME (uncharacterized protein LOC103495556 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495556 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 9.1e-136 Identity = 246/252 (97.62%), Postives = 248/252 (98.41%), Query Frame = 0
BLAST of CsaV3_7G003990 vs. TrEMBL
Match: tr|A5BW05|A5BW05_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_039450 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 5.4e-88 Identity = 172/260 (66.15%), Postives = 201/260 (77.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |