CsaV3_7G003770 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAATGAATTTTGTTAGACGAAATAGTTAGCCAATTTTTTTATTTTTCAGAAACTCTTATTTGAAACTAAAAAAATCCTTTTCAAAATAATAATATTAAAAAATCCTTTGAAAGCTCTCATGGTTGGAGGAGACCAGAATGGAAATGTATTCTCTTCCCGCCGTAATAGTAATCCACTGAGCAACCCCCGCGGCGGACGTGGATTCTTCGATATCACAGGGTCTTAGGGTTCTCTAATGGCGGAATTTTCTTCAAAAGAGGAGCTCGTCCGGCTAATCAAGAGGCTCGGGAGTAATCTAAGTGTTAAACTCTCCACTTTATTCTCGATATTGTTTCAAACTCGGGTTTGTTTTCCATTCCTTTCGTCTCTATTCATTTCGTTGCGTTTTGCAGTTCATTTTTGGAAATTCTGTTTTCAAATTCTGCTTCTCGTTCTAGATTTTGTAGTGACGGGTCTGGAATTTGTGTTAAATGCTCAGCCCCATAATTTCGCTTGATTGATATATAAAGCTATCCGGCTCTCTTAATTGATTTGTTAATGCTGTAGACTTTTTAGTAAGATTGTTGTCTTTCCCAAGTTGTGATGTTCTTGCCATCACTCTGGTAAATTATGACTGATGTCTGATGATTGTTTGAAATTGGCCAGAATCGAGAGCTGTAACTTTACTAATTCTTAAAAAGATTTTATTGTTTGTGAGCAGTAACCTCAGATGCTAGTTGGTGGTTTGATTTTAGCTATAATCATTGTGTTTCATATTTGTTTGCTGTTAGTCAAGGTGCAATGATATCTAAAATAATACTACTACTAATATTAATAATGATGACAAATATTTAAATAAAGAGCTTATAGAAAAAATCCCTTATCCTGGAGTTGCCGGACAAAAGGGGCATTTTGAATGAAAACATAGATTCAATGCAAGGAAGTTTTATGGCTTCAGAGGTGACACCAAAATCCCTTCAGGAGGGAGATCGAAACTCTAGCATTTTCTATAGAATTTTATGGCCAGCAGGATAAATAGCTTTATTGTAGGTAGATGTTTGGAGGTGCTGACCAGTGATGTGAGAAGTCGATTTGTGACCAACAGTAGAACTTGAATTTTTTTACTTCTTTGTTCAAAGGTTGTGGACTACAGAAAAATGGTAAAAATTTCTTTCCCAGGCATCTAACCTAGGATCCTATCTCACTTGTCAAAGTGTCAATTTCAAAGTTTTACTGAAATTCAATGAAGAAATTTCATTCGTAGATCGTAGTCTTCAATCCTGGTCCACGTTGCCTTTAATAAGTCTTGGAACAAGATCATCCAATGAGTAATGACTATGTTACAGGACTATTTCAGGATGGTAATATCACATATAGCATCTATTGAATGTAGAGACAAAGAACAAACACAAGTTTTATGTGGAAACCCTAGTTCTGGGAGAAAAACTACGGTGTAAATCTTTCTTAATAAAACTAATGATACATGAGAGCATTAATTTATAGGCAATACAAACCTAATTAAAAGAATGAAAGACCATTAGGGAAACATAAAAGACTGAAAACCTTTGGGCTTTCAACATACAACAAGCCTGCTAATTCTAACAACATCAATAGAAGGGGGTGGAAAAAGTGTTGGAAGAGGGATTGTAGCCAAATTTTCCTCAATCACTATTAAATGTCAAGTTGTGTTTGTGGGAGAAGGAAAAGTTTAGGATCCCATCCTTGTTATCAACACACTCAAAGATGAGTGAGGAGTAAAAAAGCAGAAGGGGGGTCTATAAACTTAACCATGAGAAACTGTACTGTTTGGTGATCAGAATTTGTGATTACCAATCTCAAGGAAAAGGCTTTGACTCAAATTCAGGAATGTGCAACAGAGGATTCCTTTTGCATACAATCTTCATAGCTTATATTTTATGAGAGATCAAGAGGGAAGTTAAACACTTGAGAGAGTTGAATTGAGACCAAGAGATCCTTTATTACTGTACCTTTTTTGACTTGAGTAGGTTTTTTCCAGGAGCCATGGAAACAAAGTTGATCATCTCAGTTTGCAAATTACAATCCTCTTGCTCCCTTTGGCAAATAAAAAATTGACCACTTATTTGGTAGTCCTTGAAAGGATTTTTTTTCTAGAAGAAAAAAAAAGGTTTGATGCATAAATCTGCAATACAGTGGTGAGGATCAATGTCTGGAGAAAGTCAAGTTTTCCTTGACATTGGCAAGTTCTCTCAGCCGTGTGAACACAATGGAACCTCGAGAAATATGCCTTTGTTAATGGATCATTTTTGTTGTATCGTTTGTCGGAAGGCTGAGGAAAACTTTGACCACCTTCTTTGGAGTGGAAGTTTGCGGGACTGGTGTAGAATTGTTATCTTAGGAGTTTGAGCTTGTGATTGCTCGCCAAAGGGACATTTGTTTGATGATGGGGGAGTTCTGCCTTCATCCACCTTTCAAAGAAAAAGGTCGTTTTTTGTGTTTCATGGGGGTGTGTGCTTTGTTGTGGGATATTTGGGGGGAGAGGAACAATGGAGTATTTTGAGGTGTGGATAAGAACCCTTGTGAGTTTTAGTCCTTGTCGAGGTTCTATGTTTCTATTTGGGCTTCGATTTCGAAGATCTTTTGTTATTATTTGCTAGACAATATCTTAGTTAGTTGGAAACCCTTTCATTAGTGGAATTTGTTATTGTGGGCTTTGTTTTTGTATGCTCTTGTATTCTTTAATTTTTTTTTTCAATGAATGCTGTTATATAAAAAAAATGTTTGTAGATTAGTGGTGGTGGGCTAATAACTTCTCTTTCACTTCAGCTTAGTAGCCCCTTTGGTAATTGGAACTTTCCATGGGAATCGATCCTCAAAGTAGGCATATCTAAAGGAATCCCCAACTAGCATATCTAAAGGAGGAAGACTTACTCTAGTTTAAGTTGTCCTTGCAAATATTTCAACTTTCCGGTCTTCAGAGCTCCTAGTAGTTCAACTAATGAGGTTGACAAGATCCTGAGGAATCCAAAGTGGGCATAATCCGACAGTTATTGATGGGTTGTTGTACACTTTTTAAGGATAGAAATACGAGTACAAACTTTTTTGTTTTTTAGCTCCTGTTTTTGTTGTTGCATGCACTTTTGTGACATGGTTGCTGGAAAGAAACAATAGAACCTGAATATATTAAATATAAAATGATATTGAATTACATGATAAACCAAGTGTCCGAGGTACTTGGACCCGCCCAAACTTGAGATGCTCTCACGTCGTAGTTCATACTTCAAAATATAGCTTACCTTCCTCATTCCCTTAACCTCTATTTATAATCAAACTTCCCTAACAGGCTCATTAATGAGTTGCTAATATGCTCTTAATACTTTAATTATTTACTCATAGCATTCCTATCACAGTGTGTGTCATTAGTAAAACACAGGTGCTGCAAAGTACTAATTTTTGTTGGAAATACCTGTTTTTGATGGAGTTGTCTGTTTTCTTTGGACAGTGGCAGGTGTAACAGATGTTCAACTAAGATCACAATTTGATGCTTCATGTTCTAATTTGTTGCAGAATTTCCGATCTCTTAGTGCTATTGCGGGTTTGGCTCTTGCTGTCATATTCTCATGGAAACTGTTAAGACCACCTAGTGGACATCGCAGAAGACAACCAAAAAGGCAAACTTCTTCAGCAGGCAACTCTGACATCAGCACAAGTTCAAATTCACAATTGATTACTTCTGCAGTTTTTTCTCCTTCAGATGACGCAGGTGCACAGAAGGTCAGTTGTGGTTTAGGAAAAATACATCTTTTGTATTTGTAGTTTGAAAAAGTTTTCACTTTCATCCTTAAGTTTCTCACATTATAACTCCTGAAGTTTGGTTCCTAGAATAATTATTCCCTTACTGGTACTAGCAAAAATTTTATTGAGCAAATTAATTGATATTGTGCTTTACATGTCTAATGAATTTTGATAATGTCACAAGTTGTATTAATTTTATTTATTTGATATGTGAAAGAAGAACAAACATGCAATGTATATATAATTATTAATTATTATGCTTGACACGTCAGTTAAGCATTGATACGATATCATTTAACTAGATCCTATTAGCATCATTGATGTAATATGCATTTCAAAGACCAACTTGGACCAGATTTCATACCTCAAGGGTTATGTTGCCTTTTCAAGCTTAAGAGCTGAGTGAAAACTTTTTCATAGACTAAAAATGTGTATTTTTACAATTTATTAGTATTCATTACATAGTTTATAATGAGTGTGGTGTTTTTCAGCCAACTTTGGAGCAAATTGTTAGACAAAAGCTTGGTGGTGGAAGAAAGGTAATGAAAACATGTCCGATGATCCTTCATATGGTGAAAGCTAGATATGAGTTATTTGATTAGAAATGGATAGCCTTTAAAGTCTAATCTCATTGACCATTCATCACACGTAAGATTAACCTTTCAAGTTAATGTTTATCATACTACGTGCCCAAAAGCTTACGCAGTGAAGTCGACCTTTCATCTTGTAGAAGTATGTTACAGTTTACAAATTGTAATGATAAGTTCTGATTCCAATTCTTGTTATTTTAGGTAACTTGTCGTCTGCTTGGAATAATTTTGGAGGAAAAAAGTCCAGAAGAGCTGCAGGCTGTGGTATTTTTCCTATCTATGTGTTTTGGAGTGAAATTGTCTTTGAGAAAGAATTATCGTTTTGTGTTGATGTTTGGTAATGCTATTGACAGAATCAAGCAACTGTAAGGTCCTCTGTCGTGGATGTGCTTTTAGAGATCACAAATTATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGGTGAGACTAATTTATCAGGATGAACTTTCCAAACTTAAGTGAAGTCTGCAAAATGCTCACTTTAAATGGTTGGCATAGAAGATTTGTGCTCTCTCTCCTGGTGGTATGCAGTCAAAATACGCTCAAACTTGAAACAAAAAGAAAATAATAATAATAATAATAAGGATGGTTTGAGGATTAAAAATCTAACTCTATACAACAGCTTTATGCTTTTTGGTACTCAGTTTATGATCTGGGAGCTACAATCTACCTTGTTCCCTAAAACTCCATGGTTCGAAGGCATTTCCTTTTGCAGTATCTTCATATACCATCATTTTATTAGTTTTAATACTGAAAAAATATTTTGTGCAGAGAAAGGTTATTGTGGCTCTAGAAGATGCTGGTGTTTTCGCATCAGGTGGCTTGATCAAGGAAAAGGTTGGCCCTATCAACTTTATTTATTTCATAAGTTTCGACTGCTTATTGTTCATAGTTTCCTTATCCTTATGAGGTTGATAAATTGATCCTAGTGTTTTACGTTATATTTTATTTGCTTGTTTCTTGGTTGCTGCAGTGTGTTGGGCGTTTAATATCCTTTTGTCTATTATTTCTTTTTCTTACTAAATTTCTTAATGCTTTTGGCATCCCTCCCCATTAAGACCTCCTGTGAGAAGCTAGCTGAACTATGTTTACATGGTTGAATTTTGTACTTCTTTGTTTAGGTTCTCTTCTGTAGTACAGAAAATGGGAGGACGTCTTTTGTTCGGCAACTGGAACCTGATTGGCATATCGACTCAGATCCTGAAATCATATCTCAATTAGCGGTTTGTTTCCATATAATTTAGTAATCCAAGTTTATTGAGGGTGATCACACACCAAGGTCCACTTACTAATCTTTAAAAATTAAACTTAAAAATCAAGCTTATGAACACTCTACTTTTAGCTATAGGCACTTGTAGACTTTGTTATGTTATCTACAATCTACCTGGAACTTGTTTTTATTTTTAGAATTTAACTAAGAATTCAAACATTACCTTATAGGAAACTAGCATAACTTTTAAAAACCATGTGCTACATTGAAATCTTACATATTTTTCAAAACGAATCTGCGAAGTTTGTTTGATTTAAAATGCCACAGAGATTCATCAAGTGTCAGCTTCACGTATCTGAAGTGAAGCCCGAGAGGATGGCCTCTAATGTTTTCACGTCGGCATCACTGGAGCACTTCTTTCAATGCACATGACAGACAGAGACCGCCAGAAAGTGTACATGTAGAATTTCTGTCTTCTTCTTCTTAGATTTTATGTGCATTATTATTATTATTATTATTCCTTCAAATGATTACTCGGTTTCAGCTTTCAGGAAAAAATAAATGCTGGGTTTTGTTCAATAGCTTTATGAATAGCAAATTGGATGAATGATATCAACAAAGATGAGTTCTCCTCCCCAATGTCCCCATCCCTAGGAATGACCCATTACCCTTTCTCGTGCGTTTCTCCACTTCATTTTTCCTTCTTAATTCTGGGTTGTAATAAGTACATTGGAGAACATTTCACTGTAGGTTTATTTATTTATTTCTTTGTAGAATGTAAGCGACAATCGGGAAAGGGGAAAGGGGAAAGGGGATAGGCCGCATAGACATTTCTTCAAAATACTCTTTTGAGCTCTCACAACTCTCATCAATAAAATCATATTTCTGATTTT ATGGCGGAATTTTCTTCAAAAGAGGAGCTCGTCCGGCTAATCAAGAGGCTCGGGAGTAATCTAAGTGTTAAACTCTCCACTTTATTCTCGATATTGTTTCAAACTCGGAATTTCCGATCTCTTAGTGCTATTGCGGGTTTGGCTCTTGCTGTCATATTCTCATGGAAACTGTTAAGACCACCTAGTGGACATCGCAGAAGACAACCAAAAAGGCAAACTTCTTCAGCAGGCAACTCTGACATCAGCACAAGTTCAAATTCACAATTGATTACTTCTGCAGTTTTTTCTCCTTCAGATGACGCAGGTGCACAGAAGCCAACTTTGGAGCAAATTGTTAGACAAAAGCTTGGTGGTGGAAGAAAGGTAACTTGTCGTCTGCTTGGAATAATTTTGGAGGAAAAAAGTCCAGAAGAGCTGCAGGCTGTGAATCAAGCAACTGTAAGGTCCTCTGTCGTGGATGTGCTTTTAGAGATCACAAATTATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGAGAAAGGTTATTGTGGCTCTAGAAGATGCTGGTGTTTTCGCATCAGGTGGCTTGATCAAGGAAAAGTGTGTTGGGCGTTTAATATCCTTTTGTCTATTATTTCTTTTTCTTACTAAATTTCTTAATGCTTTTGGCATCCCTCCCCATTAA ATGGCGGAATTTTCTTCAAAAGAGGAGCTCGTCCGGCTAATCAAGAGGCTCGGGAGTAATCTAAGTGTTAAACTCTCCACTTTATTCTCGATATTGTTTCAAACTCGGAATTTCCGATCTCTTAGTGCTATTGCGGGTTTGGCTCTTGCTGTCATATTCTCATGGAAACTGTTAAGACCACCTAGTGGACATCGCAGAAGACAACCAAAAAGGCAAACTTCTTCAGCAGGCAACTCTGACATCAGCACAAGTTCAAATTCACAATTGATTACTTCTGCAGTTTTTTCTCCTTCAGATGACGCAGGTGCACAGAAGCCAACTTTGGAGCAAATTGTTAGACAAAAGCTTGGTGGTGGAAGAAAGGTAACTTGTCGTCTGCTTGGAATAATTTTGGAGGAAAAAAGTCCAGAAGAGCTGCAGGCTGTGAATCAAGCAACTGTAAGGTCCTCTGTCGTGGATGTGCTTTTAGAGATCACAAATTATTGTGATCTCTATTTGATGGAAAGAGTTCTTGATGAGGAAAGCGAGAGAAAGGTTATTGTGGCTCTAGAAGATGCTGGTGTTTTCGCATCAGGTGGCTTGATCAAGGAAAAGTGTGTTGGGCGTTTAATATCCTTTTGTCTATTATTTCTTTTTCTTACTAAATTTCTTAATGCTTTTGGCATCCCTCCCCATTAA MAEFSSKEELVRLIKRLGSNLSVKLSTLFSILFQTRNFRSLSAIAGLALAVIFSWKLLRPPSGHRRRQPKRQTSSAGNSDISTSSNSQLITSAVFSPSDDAGAQKPTLEQIVRQKLGGGRKVTCRLLGIILEEKSPEELQAVNQATVRSSVVDVLLEITNYCDLYLMERVLDEESERKVIVALEDAGVFASGGLIKEKCVGRLISFCLLFLFLTKFLNAFGIPPH
BLAST of CsaV3_7G003770 vs. NCBI nr
Match: XP_004144486.1 (PREDICTED: peroxisome biogenesis protein 22 [Cucumis sativus] >XP_011658710.1 PREDICTED: peroxisome biogenesis protein 22 [Cucumis sativus] >KGN43540.1 hypothetical protein Csa_7G044800 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. NCBI nr
Match: XP_008455416.1 (PREDICTED: peroxisome biogenesis protein 22-like isoform X1 [Cucumis melo]) HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90 Identity = 181/198 (91.41%), Postives = 188/198 (94.95%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. NCBI nr
Match: XP_008455417.1 (PREDICTED: peroxisome biogenesis protein 22-like isoform X2 [Cucumis melo]) HSP 1 Score: 311.6 bits (797), Expect = 2.2e-81 Identity = 171/198 (86.36%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. NCBI nr
Match: XP_022930839.1 (peroxisome biogenesis protein 22-like [Cucurbita moschata]) HSP 1 Score: 278.1 bits (710), Expect = 2.7e-71 Identity = 158/208 (75.96%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. NCBI nr
Match: XP_023531638.1 (peroxisome biogenesis protein 22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277.3 bits (708), Expect = 4.5e-71 Identity = 157/208 (75.48%), Postives = 167/208 (80.29%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TAIR10
Match: AT3G21865.1 (peroxin 22) HSP 1 Score: 185.3 bits (469), Expect = 4.3e-47 Identity = 125/236 (52.97%), Postives = 152/236 (64.41%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. Swiss-Prot
Match: sp|Q9LSX7|PEX22_ARATH (Peroxisome biogenesis protein 22 OS=Arabidopsis thaliana OX=3702 GN=PEX22 PE=1 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.7e-46 Identity = 125/236 (52.97%), Postives = 152/236 (64.41%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TrEMBL
Match: tr|A0A0A0K1M8|A0A0A0K1M8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044800 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 2.2e-98 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TrEMBL
Match: tr|A0A1S3C0F2|A0A1S3C0F2_CUCME (peroxisome biogenesis protein 22-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495582 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.7e-90 Identity = 181/198 (91.41%), Postives = 188/198 (94.95%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TrEMBL
Match: tr|A0A1S3C106|A0A1S3C106_CUCME (peroxisome biogenesis protein 22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495582 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.4e-81 Identity = 171/198 (86.36%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TrEMBL
Match: tr|D7TEP0|D7TEP0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g02470 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.5e-59 Identity = 133/208 (63.94%), Postives = 162/208 (77.88%), Query Frame = 0
BLAST of CsaV3_7G003770 vs. TrEMBL
Match: tr|A0A2P5F675|A0A2P5F675_9ROSA (Peroxisome biogenesis protein OS=Trema orientalis OX=63057 GN=TorRG33x02_108470 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58 Identity = 136/227 (59.91%), Postives = 169/227 (74.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |