CsaV3_7G003210 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G003210
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Optic atrophy 3 protein (OPA3)
Location	chr7 : 2402014 .. 2404827 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAATGTAACGGCTATATGAAAAAAAGAAAAAGAAAAAGTTTAATGTAATAAATCTAAGTTTTGGGCCTTTCAACATTGGATTAGAAGACTGAGTTTGGGTTCATAGGCCCATCGTCTTTTAACGTAGTTTGCTGAAATCAAATTCCAGATTGTAACGGCGAAACGCATTTCTTTCTCGATTGTTCGGCCTGCGATCCATCCACCCGTCGCTGTCAGCATTTGATTTCTTCCTCTCGATTCCAAATTTCTGTTTCTTCTTTTCTAATTCTCTTTCTTCTTCCTCACGCATTATGATTGCAGAATCGGATACCCGGTCAACACTGATTCACTTCAGCAGTCAACTTTTCTATTTCTTCCCCACCTCTTCAGTTTCCTTCACTTCTATGTTCTGAAGCTCGATTGGAGTTCCTCTAGAAATGATCCTCCCTGTTGTAAAGTTGGGGGCTCTTGCTCTTAAAACCATCTGCAAACCCATCGCCAATCGCCTCAAGAAGGAAGCTGGATTGCATCCGAAGTTTAGGCAGTGTATTATCAACTTCGCACAGGTTTCATTTCTTTTCATGTAATTACACGGTTTTCTTGCTTGTTGTTTACACTTGCAATTATGATCCATTTGGCACCAATGGGTTGGATTTTCTTGGAATAATGACATGCTTAAACTTATATGTTCCATGAGTAGTAGCTCTTAGGAGAAAGTTTAAATGTAAACTCTACTGCTATAAAATTCTGCAGTCTAAGACTCGGTAACTTGATGTGTATGTTAATATTTCGAAGTTTGTGGAATCAGTTGTTTCACATTTGATGCAACCCAATGATTTGTTTACTCTTCTCCTAGAGATATGTTCCGTCATATAAATAAGTTAGGTGTTCATGGAATGCTGATAGGTTTATTGCTCATTAACCTCATAGTTTGCTTTGTTAACATGAATTCTTCTTTGTGGAATGGATTATAAGATGTTGTCATATTGTACTTCTTATATGGAACCAGGCAAATCATCGGTTTTCGACAAATGTACAACGTAGAATATATGGTTATGCAACAGATGTTGCCATTCGTCCTCTGAATGAAGAGAAAGCTGTCCAAGCTGCGGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTAAAATGATTTCATCTCTCTCTCTCTCCCCGTCCCTTTTTCTTTTAGAAGAATTGTCTCAGGGTTTGTTTTTACTGTGTCTTTATTCTGCTTTGTAAAGAAGGATTTTTGTTATTCTTCCTACTGGGATATTTTGATTAGTAAAATTATATCTCATTCACATCGAAATATACAGATAACAATTGATTTACAATGTTTACCAATTCTCATTTGGTTACAATGGGATGAAAACAAGTTTTTTGTTGAACATGTGAACTGGCCTTTTGGAGAAGTATATTACTTCCACCAAGTTATCCAATGTGCCAAAAGAAAAAACAACTTTAGACATTAGGGATCCGTATACTTATTATCATAATTCTTCACTAGAAGTGCGTATTTCCCAATTTTAATATCAGCTGTACTATCCCCATAGGTTGCTGGAACTGCTATTATTTTTGAGGTGCAAAGAAGTTCGAGGTCGGAAGCAAGAAAGGAGGAGCTCCGCAGGCAAGAATTGGAGGTATTTGGAGTTTCTATTCCTTTTTGTATCTGTTCCCTTCTTTTGTTTTCAGAATCAAAAGAATTATGTCTTCTTTAACAGTTGTGAATTTATTACAAAACAATAAAATTAGATATCAGTTATAGTTCGCATTCCCGAAATTATACAGAATTGTACCAATGACAATGCAATTTGTTCCACCAGAAACTTTTGTTTCACACACAAGTGCTTCATTGCTCTGACTTTAATTTAAAATAATGTATAAGCGTAAATATCTTTACATGTTTGTTCCTGCTTATAGGCGATGAAGCAAAGGGATGATGATATAGCCCGAGAAATAGAAATTCTTAAACAAAAGATCGAAAATCTAGAAGAGTTGTCCAAGGGAAGAGGTCTAACTGGCTTATTTCACTTCAGGCATCCGCATACTACGGAAGGTGAAAACGTGAAACACTCTTGATCATCATTAAGACAAAGTAAGCCATGGATTTTGTAACTGAGCATTTTATCATTGGTTGATTGAAATCCAACATTTCTGACGGAGGGTTGTTAATAAAGACTTTAATCATGTAAGAAATTGCAGCCTTGTAAATACATTGTCCAACTCTAGAATGTTCAAATGAAATTTGAAGTTCAGAATGAAAAATGACCAACCGATATTCCAAATACCTGCATCTCTCGATGATTGGCATGTATATGTTCAGAAATGTGGATCTTTTTACATCTTTATTAGAGGGCAATGTTTGTTTTGTATAAAAACTATATCAGGATGAAGAGAACTGTTTGAAAATGGGCTGTTGGGACCTTTCTCTAGTAAAATAAATGCTACTGTCCTTTAGTTGTAAACCCTATCAGTAGCATTAACGTGACCTGTCTGTATCTTTTTTTTCATACATCATCATACGTACAATTTCTTAGAATCGTAGGTGAGCTCTTGAATTTGATTTTGGACATCAATAAATAAGAAAAACTAGTGAATGTTCCAAACAGTTTCCTTGACATCAATAATATAAGGAATTTGCATTTGTAATTTAAGAAATTTATATTTTATCGTGCATTTATTTATTGTAGAAGATATATCCAATTCTTATGTAGGCAGTAATTTAATGCTATCTATAACTCTTCACTCTCCCTCCATTTATTTTGTACAAAGCACATAGATGAGTAACTCCCATTGGAGTTTAGTTTAAAGGTAAAGCAACAATCATCC

mRNA sequence

ATGATCCTCCCTGTTGTAAAGTTGGGGGCTCTTGCTCTTAAAACCATCTGCAAACCCATCGCCAATCGCCTCAAGAAGGAAGCTGGATTGCATCCGAAGTTTAGGCAGTGTATTATCAACTTCGCACAGGCAAATCATCGGTTTTCGACAAATGTACAACGTAGAATATATGGTTATGCAACAGATGTTGCCATTCGTCCTCTGAATGAAGAGAAAGCTGTCCAAGCTGCGGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTTGCTGGAACTGCTATTATTTTTGAGGTGCAAAGAAGTTCGAGGTCGGAAGCAAGAAAGGAGGAGCTCCGCAGGCAAGAATTGGAGGCGATGAAGCAAAGGGATGATGATATAGCCCGAGAAATAGAAATTCTTAAACAAAAGATCGAAAATCTAGAAGAGTTGTCCAAGGGAAGAGGTCTAACTGGCTTATTTCACTTCAGGCATCCGCATACTACGGAAGGTGAAAACGTGAAACACTCTTGA

Coding sequence (CDS)

ATGATCCTCCCTGTTGTAAAGTTGGGGGCTCTTGCTCTTAAAACCATCTGCAAACCCATCGCCAATCGCCTCAAGAAGGAAGCTGGATTGCATCCGAAGTTTAGGCAGTGTATTATCAACTTCGCACAGGCAAATCATCGGTTTTCGACAAATGTACAACGTAGAATATATGGTTATGCAACAGATGTTGCCATTCGTCCTCTGAATGAAGAGAAAGCTGTCCAAGCTGCGGCAGATCTTCTCGGGGAGCTCTTTGTATTCACGGTTGCTGGAACTGCTATTATTTTTGAGGTGCAAAGAAGTTCGAGGTCGGAAGCAAGAAAGGAGGAGCTCCGCAGGCAAGAATTGGAGGCGATGAAGCAAAGGGATGATGATATAGCCCGAGAAATAGAAATTCTTAAACAAAAGATCGAAAATCTAGAAGAGTTGTCCAAGGGAAGAGGTCTAACTGGCTTATTTCACTTCAGGCATCCGCATACTACGGAAGGTGAAAACGTGAAACACTCTTGA

Protein sequence

MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYATDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMKQRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS

Homology

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BLAST of CsaV3_7G003210 vs. NCBI nr
Match: XP_004144517.1 (PREDICTED: OPA3-like protein [Cucumis sativus] >KGN43483.1 hypothetical protein Csa_7G041290 [Cucumis sativus])

HSP 1 Score: 325.5 bits (833), Expect = 1.1e-85
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK
Sbjct: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS
Sbjct: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 169

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BLAST of CsaV3_7G003210 vs. NCBI nr
Match: XP_008455484.1 (PREDICTED: OPA3-like protein [Cucumis melo])

HSP 1 Score: 311.6 bits (797), Expect = 1.6e-81
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIIN AQANHRFSTNVQRRIYGYA
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINIAQANHRFSTNVQRRIYGYA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           T+VAI PLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRSSRSEARKEELRRQELEAMK
Sbjct: 61  TNVAIPPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDD IAREIEILKQKIENLEELSKGRGLTGLFHFRHPHT EGENVKHS
Sbjct: 121 QRDDGIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTAEGENVKHS 169

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BLAST of CsaV3_7G003210 vs. NCBI nr
Match: XP_023554627.1 (optic atrophy 3 protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 4.2e-77
Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILP VKLGALALKTICKPIANRLKKEAGLHPKFRQ IIN AQANHRFSTNVQRRIYG+A
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGHA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQR+SRSEARKEELRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDDD+AREIEILKQKIE LE+LSKGRGLTGLFHFRHPHT+E E  KHS
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHPHTSEAEREKHS 169

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BLAST of CsaV3_7G003210 vs. NCBI nr
Match: XP_022136001.1 (OPA3-like protein [Momordica charantia])

HSP 1 Score: 290.0 bits (741), Expect = 5.1e-75
Identity = 148/169 (87.57%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILP VKLG LALKT CKPIA RLKK+AGLHPKFRQCIIN AQANHRFSTNVQRRIYG A
Sbjct: 1   MILPFVKLGTLALKTFCKPIARRLKKDAGLHPKFRQCIINVAQANHRFSTNVQRRIYGRA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRSSRSEARKEELRRQELEAMK
Sbjct: 61  TDAAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDDDIAREIEILKQK+E LE+LSKGRG+T +FHFRHPHT+E E  KH+
Sbjct: 121 QRDDDIAREIEILKQKVEELEQLSKGRGVTSIFHFRHPHTSEAEKAKHT 169

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BLAST of CsaV3_7G003210 vs. NCBI nr
Match: XP_022969272.1 (OPA3-like protein [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74
Identity = 151/168 (89.88%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILP VKLGALALKTICKPIANRLKKEAGLHPKFRQ IIN AQANHRFSTNVQRRIYG A
Sbjct: 1   MILPFVKLGALALKTICKPIANRLKKEAGLHPKFRQYIINIAQANHRFSTNVQRRIYGRA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TD AIRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQR+SRSEARKEELRRQELEAMK
Sbjct: 61  TDTAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRNSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKH 169
           QRDDD+AREIEILKQKIE LE+LSKGRGLTGLFHFRHPH +E    KH
Sbjct: 121 QRDDDLAREIEILKQKIEELEKLSKGRGLTGLFHFRHPHASEAGKEKH 168

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BLAST of CsaV3_7G003210 vs. TAIR10
Match: AT3G58150.1 (Optic atrophy 3 protein (OPA3))

HSP 1 Score: 179.1 bits (453), Expect = 2.3e-45
Identity = 96/146 (65.75%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           M+LP++KLG LAL+TICKPIAN+LKKEAG++PKFRQ IIN AQANHRF+T +QRR  G  
Sbjct: 12  MVLPLLKLGTLALRTICKPIANQLKKEAGVNPKFRQFIINIAQANHRFTTKLQRRASGRI 71

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TD  IRPLNEE+AVQAAADLLGELF FTVAG A+++EVQR++R EA+KEE R+QEL   +
Sbjct: 72  TDAVIRPLNEERAVQAAADLLGELFAFTVAGAALVYEVQRNARGEAKKEEKRQQELAEFR 131

Query: 121 QRDDDIAREIEILKQKIENL-EELSK 146
           ++   +  EIE +KQ+   L EELSK
Sbjct: 132 RKHXXMENEIEEMKQRCCLLHEELSK 157

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BLAST of CsaV3_7G003210 vs. TAIR10
Match: AT1G28510.1 (Optic atrophy 3 protein (OPA3))

HSP 1 Score: 173.7 bits (439), Expect = 9.6e-44
Identity = 92/162 (56.79%), Postives = 118/162 (72.84%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           M+LP++KLG LA+KTI KP+A++LK +A +HPKFRQ IINFAQ NHR +T +QRRIYG+A
Sbjct: 1   MVLPLMKLGTLAVKTISKPLASQLKHQAKVHPKFRQSIINFAQRNHRITTQMQRRIYGHA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TDV IRPL+EEKAVQAA DL+GE+F+F V G  ++FEVQRSSRSEARK          ++
Sbjct: 61  TDVEIRPLDEEKAVQAAVDLIGEIFLFGVGGAVVVFEVQRSSRSEARKXXXXXXXXXXLR 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFR-HPHTT 162
                       LK K+E LE+L+K RGL+G+F  +  P TT
Sbjct: 121 XXXXXXXXXXADLKSKLEELEQLAKARGLSGIFQLKPQPGTT 162

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BLAST of CsaV3_7G003210 vs. Swiss-Prot
Match: sp|Q9P7W0|OPA3_SCHPO (OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1703.11 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-16
Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 6   VKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFS---TNVQRRIYGYATD 65
           +K+G+L ++T+ KPIAN +K +A  H  FR+  I FAQ  HR     T + R   G A +
Sbjct: 6   LKIGSLLVRTLSKPIANTIKAQAKEHKAFRKACIEFAQWMHRAEFRITGINRAKSGGA-N 65

Query: 66  VAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQEL-EAMKQ 125
           V +RPLN+ KAV A A  L E F+FTVAG AI+FE  R+     RKE+ RR E+ EA+  
Sbjct: 66  VRLRPLNDAKAVDAGATFLSETFIFTVAGGAILFETWRA----RRKEKNRRDEVAEAILG 125

Query: 126 RDDDIAREIEILKQK 137
              +I R  EI++++
Sbjct: 126 LQHEIVRINEIMEKQ 135

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BLAST of CsaV3_7G003210 vs. Swiss-Prot
Match: sp|Q1L9A2|OPA3_DANRE (Optic atrophy 3 protein homolog OS=Danio rerio OX=7955 GN=opa3 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-11
Identity = 45/141 (31.91%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 4   PVVKLGALALKTICKPIANRLKKEAGLHPKFRQCI-INFAQANHRFSTNVQRRIYGYATD 63
           P+ KL  L ++ + KP+ANR+K  A     F+  I +  AQA H      + RI G+   
Sbjct: 7   PIAKLLYLGVRQLSKPVANRIKAGARRSEFFKNYICLPPAQAYHWIEMRTKMRIMGFRGS 66

Query: 64  VAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMKQR 123
             I+PLNE+ A +  A+LLGE  +F + G  ++ E  R + +  RKEE   Q + +++ +
Sbjct: 67  -TIKPLNEDAAAELGAELLGEAIIFVIGGGCMVLEYSRQAANSRRKEEELAQSITSLQTQ 126

Query: 124 DDDIAREIEILKQKIENLEEL 144
             ++A   E L  +I  +  L
Sbjct: 127 LGELALTTETLDAQIREVNRL 146

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BLAST of CsaV3_7G003210 vs. Swiss-Prot
Match: sp|Q641S2|OPA3_XENLA (Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-10
Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 4   PVVKLGALALKTICKPIANRLKKEAGLHPKFRQCI-INFAQANHRFSTNVQRRIYGYATD 63
           P+ KL  L ++ I KP+ANR+K  A     FR  + +  AQ  H      + RI G+   
Sbjct: 7   PIAKLLYLGIRQISKPLANRIKAGARRSEFFRTYVCLPPAQVYHWVEMRSKMRIMGFRGA 66

Query: 64  VAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMKQR 123
           V I+PLNE+ A +  A+LLGE  +F + G  ++ E  R S +  RKEE     L +M   
Sbjct: 67  V-IKPLNEDAAAELGAELLGEAIIFLIGGGCMVAEYSRQSANSHRKEEEMEARLGSM--- 126

Query: 124 DDDIAREIEILKQKIENLEELSKGRGLTG 152
           + +IAR + +L +++E    +++ + L G
Sbjct: 127 EAEIAR-LGLLTEELETRARVTERQQLAG 150

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BLAST of CsaV3_7G003210 vs. Swiss-Prot
Match: sp|Q9H6K4|OPA3_HUMAN (Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 0


Query: 4   PVVKLGALALKTICKPIANRLKKEAGLHPKFRQCI-INFAQANHRFSTNVQRRIYGYATD 63
           P+ KL  L ++ + KP+ANR+K+ A     F+  I +  AQ  H      + RI G+   
Sbjct: 7   PMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGFRGT 66

Query: 64  VAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMKQR 123
           V I+PLNEE A +  A+LLGE  +F V G  ++ E  R    +  KEE +R    A++  
Sbjct: 67  V-IKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQAQQRHKEEEQRAAWNALRDE 126

Query: 124 DDDIAREIEILKQKIE 139
              +A  +E L+ +++
Sbjct: 127 VGHLALALEALQAQVQ 141

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BLAST of CsaV3_7G003210 vs. Swiss-Prot
Match: sp|Q505D7|OPA3_MOUSE (Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-10
Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 0


Query: 4   PVVKLGALALKTICKPIANRLKKEAGLHPKFRQCI-INFAQANHRFSTNVQRRIYGYATD 63
           P+ KL  L ++ + KP+ANR+K  A     F+  I +  AQ  H      + RI G+   
Sbjct: 7   PMAKLFYLGIRQVSKPLANRIKDAARRSEFFKTYICLPPAQLYHWVEMRTKMRIMGF-RG 66

Query: 64  VAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMKQR 123
             I+PLNEE A +  A+LLGE  +F V G  ++ E  R    +  KEE +R    A++  
Sbjct: 67  TTIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRNKEEEQRAAWNALQDE 126

Query: 124 DDDIAREIEILKQKIENLEELS 145
              +A  +E L+ + + +  LS
Sbjct: 127 VGRLALALEALQAQAQAMPSLS 147

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BLAST of CsaV3_7G003210 vs. TrEMBL
Match: tr|A0A0A0K203|A0A0A0K203_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041290 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 7.2e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK
Sbjct: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS
Sbjct: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 169

[Close]

BLAST of CsaV3_7G003210 vs. TrEMBL
Match: tr|A0A1S3C296|A0A1S3C296_CUCME (OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103495636 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-81
Identity = 162/169 (95.86%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIIN AQANHRFSTNVQRRIYGYA
Sbjct: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINIAQANHRFSTNVQRRIYGYA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           T+VAI PLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRSSRSEARKEELRRQELEAMK
Sbjct: 61  TNVAIPPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRRQELEAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRDD IAREIEILKQKIENLEELSKGRGLTGLFHFRHPHT EGENVKHS
Sbjct: 121 QRDDGIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTAEGENVKHS 169

[Close]

BLAST of CsaV3_7G003210 vs. TrEMBL
Match: tr|W9QV07|W9QV07_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010547 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 6.8e-68
Identity = 138/169 (81.66%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLG LALKTICKPIANRLKKEAGLHPKFRQ I++ AQANH+F T +QRRIYG+A
Sbjct: 1   MILPVVKLGTLALKTICKPIANRLKKEAGLHPKFRQLIVSIAQANHQFQTQMQRRIYGHA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           T+V IRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRSSRSEARKEELR QEL+AMK
Sbjct: 61  TNVKIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRIQELQAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVKHS 170
           QRD+D+AREIE LKQKIE++E L+KGRGL+GL HFR+ HTTE    KHS
Sbjct: 121 QRDEDLAREIEHLKQKIEDVEHLAKGRGLSGLLHFRNAHTTEDGKEKHS 169

[Close]

BLAST of CsaV3_7G003210 vs. TrEMBL
Match: tr|A0A2P5E7R1|A0A2P5E7R1_9ROSA (Optic atrophy 3-like OS=Trema orientalis OX=63057 GN=TorRG33x02_226040 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.5e-67
Identity = 134/167 (80.24%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLG LA+KTICKP ANRLKKEAGLHPKFR  IIN AQANHRF+T +QR+IYG A
Sbjct: 1   MILPVVKLGTLAIKTICKPFANRLKKEAGLHPKFRNLIINIAQANHRFTTQMQRQIYGRA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TDV IRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRS+RSEARKEELRRQEL+AMK
Sbjct: 61  TDVEIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSTRSEARKEELRRQELQAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVK 168
           QRDDD+AREIE+L++K+E +E+L+KGRGL+G+ +FRH HTTE   VK
Sbjct: 121 QRDDDLAREIELLRKKVEEIEQLAKGRGLSGILNFRHAHTTEDGKVK 167

[Close]

BLAST of CsaV3_7G003210 vs. TrEMBL
Match: tr|A0A2P5AYB0|A0A2P5AYB0_PARAD (Optic atrophy 3-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_289410 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.7e-66
Identity = 132/167 (79.04%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   MILPVVKLGALALKTICKPIANRLKKEAGLHPKFRQCIINFAQANHRFSTNVQRRIYGYA 60
           MILPVVKLG LA+K ICKP ANRLKKEAGLHPKFR  IIN AQANHRF+T +QRRIYG A
Sbjct: 1   MILPVVKLGTLAIKAICKPFANRLKKEAGLHPKFRNLIINIAQANHRFTTQMQRRIYGRA 60

Query: 61  TDVAIRPLNEEKAVQAAADLLGELFVFTVAGTAIIFEVQRSSRSEARKEELRRQELEAMK 120
           TDV IRPLNEEKAVQAAADLLGELFVFTVAG A+IFEVQRS+RSEARKEELRRQEL+AMK
Sbjct: 61  TDVEIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSARSEARKEELRRQELQAMK 120

Query: 121 QRDDDIAREIEILKQKIENLEELSKGRGLTGLFHFRHPHTTEGENVK 168
           QRDDD+ REIE+L++K+E +E+L+KGRGL+G+ +FRH HTTE    K
Sbjct: 121 QRDDDLVREIELLRKKVEEIEQLAKGRGLSGILNFRHTHTTEDGKAK 167

The following BLAST results are available for this feature:

BLAST of CsaV3_7G003210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144517.1	1.1e-85	100.00	PREDICTED: OPA3-like protein [Cucumis sativus] >KGN43483.1 hypothetical protein ...	[more]
XP_008455484.1	1.6e-81	95.86	PREDICTED: OPA3-like protein [Cucumis melo]	[more]
XP_023554627.1	4.2e-77	91.12	optic atrophy 3 protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022136001.1	5.1e-75	87.57	OPA3-like protein [Momordica charantia]	[more]
XP_022969272.1	1.1e-74	89.88	OPA3-like protein [Cucurbita maxima]	[more]

BLAST of CsaV3_7G003210 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58150.1	2.3e-45	65.75	Optic atrophy 3 protein (OPA3)	[more]
AT1G28510.1	9.6e-44	56.79	Optic atrophy 3 protein (OPA3)	[more]

BLAST of CsaV3_7G003210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9P7W0\|OPA3_SCHPO	8.1e-16	43.70	OPA3-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848...	[more]
sp\|Q1L9A2\|OPA3_DANRE	6.0e-11	31.91	Optic atrophy 3 protein homolog OS=Danio rerio OX=7955 GN=opa3 PE=3 SV=1	[more]
sp\|Q641S2\|OPA3_XENLA	1.0e-10	33.56	Optic atrophy 3 protein homolog OS=Xenopus laevis OX=8355 GN=opa3 PE=2 SV=1	[more]
sp\|Q9H6K4\|OPA3_HUMAN	2.3e-10	33.09	Optic atrophy 3 protein OS=Homo sapiens OX=9606 GN=OPA3 PE=1 SV=1	[more]
sp\|Q505D7\|OPA3_MOUSE	3.9e-10	32.39	Optic atrophy 3 protein homolog OS=Mus musculus OX=10090 GN=Opa3 PE=1 SV=1	[more]

BLAST of CsaV3_7G003210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K203\|A0A0A0K203_CUCSA	7.2e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041290 PE=4 SV=1	[more]
tr\|A0A1S3C296\|A0A1S3C296_CUCME	1.1e-81	95.86	OPA3-like protein OS=Cucumis melo OX=3656 GN=LOC103495636 PE=4 SV=1	[more]
tr\|W9QV07\|W9QV07_9ROSA	6.8e-68	81.66	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010547 PE=4 SV=1	[more]
tr\|A0A2P5E7R1\|A0A2P5E7R1_9ROSA	1.5e-67	80.24	Optic atrophy 3-like OS=Trema orientalis OX=63057 GN=TorRG33x02_226040 PE=4 SV=1	[more]
tr\|A0A2P5AYB0\|A0A2P5AYB0_PARAD	1.7e-66	79.04	Optic atrophy 3-like OS=Parasponia andersonii OX=3476 GN=PanWU01x14_289410 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010754	OPA3-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G003210.1	CsaV3_7G003210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	PANTHER	PTHR12499:SF7	SUBFAMILY NOT NAMED	coord: 1..167
IPR010754	Optic atrophy 3-like	PFAM	PF07047	OPA3	coord: 3..124 e-value: 5.9E-42 score: 142.3
IPR010754	Optic atrophy 3-like	PANTHER	PTHR12499	OPTIC ATROPHY 3 PROTEIN OPA3	coord: 1..167

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G003210	CSPI07G03330	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G003210	Cucsa.148910	Cucumber (Gy14) v1	cgycucB226
CsaV3_7G003210	CmaCh19G009000	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G003210	CmoCh19G009230	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G003210	Cp4.1LG15g07130	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G003210	CsGy7G002960	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G003210	Carg04180	Silver-seed gourd	carcucB0232
CsaV3_7G003210	Cla015632	Watermelon (97103) v1	cucwmB634
CsaV3_7G003210	MELO3C018854	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G003210	ClCG02G002260	Watermelon (Charleston Gray)	cucwcgB571
CsaV3_7G003210	Lsi11G014150	Bottle gourd (USVL1VR-Ls)	cuclsiB529
CsaV3_7G003210	MELO3C018854.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G003210	Cla97C02G028670	Watermelon (97103) v2	cucwmbB549
CsaV3_7G003210	Bhi05G001215	Wax gourd	cucwgoB695

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G003210	Cucumber (Chinese Long) v3	cuccucB099
CsaV3_7G003210	Silver-seed gourd	carcucB1114
CsaV3_7G003210	Cucumber (Gy14) v2	cgybcucB094
CsaV3_7G003210	Cucumber (Gy14) v2	cgybcucB349
CsaV3_7G003210	Cucurbita maxima (Rimu)	cmacucB0172
CsaV3_7G003210	Cucurbita maxima (Rimu)	cmacucB0684
CsaV3_7G003210	Cucurbita moschata (Rifu)	cmocucB0155
CsaV3_7G003210	Cucurbita moschata (Rifu)	cmocucB0672
CsaV3_7G003210	Cucurbita pepo (Zucchini)	cpecucB0367
CsaV3_7G003210	Cucurbita pepo (Zucchini)	cpecucB0863
CsaV3_7G003210	Wild cucumber (PI 183967)	cpicucB116
CsaV3_7G003210	Wild cucumber (PI 183967)	cpicucB419
CsaV3_7G003210	Bottle gourd (USVL1VR-Ls)	cuclsiB521
CsaV3_7G003210	Melon (DHL92) v3.5.1	cucmeB532
CsaV3_7G003210	Melon (DHL92) v3.5.1	cucmeB547
CsaV3_7G003210	Melon (DHL92) v3.6.1	cucmedB523
CsaV3_7G003210	Melon (DHL92) v3.6.1	cucmedB535
CsaV3_7G003210	Watermelon (Charleston Gray)	cucwcgB570
CsaV3_7G003210	Watermelon (97103) v1	cucwmB633
CsaV3_7G003210	Watermelon (97103) v2	cucwmbB548
CsaV3_7G003210	Wax gourd	cucwgoB694
CsaV3_7G003210	Wax gourd	cucwgoB703