CsaV3_7G003060 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G003060
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 2298448 .. 2298657 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAATATCGACGCCTCGTGGTTGGAGGATGTTGGGGCGGGTGGGGTTGTTCGTGACCTCTCAAGGTCTCTCTCATCTACGGGTTGCATGCCCGTTCTCTCAAAGTGGCCAATAACATTTTTGGAAGCCTTTGGCCTTATCAAACGGCTCCAGTCTCTGTTTTCTCTATTTCCTAGTGTCATTCTATTTCTCATTGTGATTGTTTGA

mRNA sequence

ATGCTCAATATCGACGCCTCGTGGTTGGAGGATGTTGGGGCGGGTGGGGTTGTTCGTGACCTCTCAAGGTCTCTCTCATCTACGGGTTGCATGCCCGTTCTCTCAAAGTGGCCAATAACATTTTTGGAAGCCTTTGGCCTTATCAAACGGCTCCAGTCTCTGTTTTCTCTATTTCCTAGTGTCATTCTATTTCTCATTGTGATTGTTTGA

Coding sequence (CDS)

ATGCTCAATATCGACGCCTCGTGGTTGGAGGATGTTGGGGCGGGTGGGGTTGTTCGTGACCTCTCAAGGTCTCTCTCATCTACGGGTTGCATGCCCGTTCTCTCAAAGTGGCCAATAACATTTTTGGAAGCCTTTGGCCTTATCAAACGGCTCCAGTCTCTGTTTTCTCTATTTCCTAGTGTCATTCTATTTCTCATTGTGATTGTTTGA

Protein sequence

MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPSVILFLIVIV
Homology
[Close]
BLAST of CsaV3_7G003060 vs. NCBI nr
Match: KGN43466.1 (hypothetical protein Csa_7G038170 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS 60
          MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS
Sbjct: 1  MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS 60

Query: 61 VILFLIVIV 70
          VILFLIVIV
Sbjct: 61 VILFLIVIV 69

[Close]
BLAST of CsaV3_7G003060 vs. TrEMBL
Match: tr|A0A0A0K6N2|A0A0A0K6N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038170 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.7e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS 60
          MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS
Sbjct: 1  MLNIDASWLEDVGAGGVVRDLSRSLSSTGCMPVLSKWPITFLEAFGLIKRLQSLFSLFPS 60

Query: 61 VILFLIVIV 70
          VILFLIVIV
Sbjct: 61 VILFLIVIV 69

The following BLAST results are available for this feature:
BLAST of CsaV3_7G003060 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43466.11.5e-28100.00hypothetical protein Csa_7G038170 [Cucumis sativus][more]
BLAST of CsaV3_7G003060 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G003060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G003060 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6N2|A0A0A0K6N2_CUCSA9.7e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G038170 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G003060.1CsaV3_7G003060.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G003060Wax gourdcucwgoB694
CsaV3_7G003060Wax gourdcucwgoB695
CsaV3_7G003060Wax gourdcucwgoB703
CsaV3_7G003060Cucumber (Chinese Long) v3cuccucB099
CsaV3_7G003060Silver-seed gourdcarcucB0232
CsaV3_7G003060Silver-seed gourdcarcucB1114
CsaV3_7G003060Cucumber (Gy14) v2cgybcucB094
CsaV3_7G003060Cucumber (Gy14) v2cgybcucB348
CsaV3_7G003060Cucumber (Gy14) v2cgybcucB349
CsaV3_7G003060Cucumber (Gy14) v1cgycucB292
CsaV3_7G003060Cucurbita maxima (Rimu)cmacucB0172
CsaV3_7G003060Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G003060Cucurbita maxima (Rimu)cmacucB0684
CsaV3_7G003060Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G003060Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G003060Cucurbita moschata (Rifu)cmocucB0672
CsaV3_7G003060Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G003060Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G003060Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G003060Wild cucumber (PI 183967)cpicucB116
CsaV3_7G003060Wild cucumber (PI 183967)cpicucB415
CsaV3_7G003060Wild cucumber (PI 183967)cpicucB419
CsaV3_7G003060Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G003060Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G003060Melon (DHL92) v3.5.1cucmeB547
CsaV3_7G003060Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G003060Melon (DHL92) v3.6.1cucmedB535
CsaV3_7G003060Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G003060Watermelon (Charleston Gray)cucwcgB570
CsaV3_7G003060Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G003060Watermelon (97103) v1cucwmB633
CsaV3_7G003060Watermelon (97103) v1cucwmB634
CsaV3_7G003060Watermelon (97103) v2cucwmbB548
CsaV3_7G003060Watermelon (97103) v2cucwmbB549