CsaV3_7G002910 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G002910
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 2210126 .. 2210599 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCAAAACCTGACACATACAATGGGGTGAGGAATGCCACGGTTGTGGAAAACTTCCTCTTTGGCCTTGACCGATACTATGCAGCTGTCGGTGTTCGAGATGATGAGGCCAAGATAAACAATGCCCCGACATTCCTAAGGGATGCCGCACAACTTTGGTGGTGTCGACGGTACGCCGACCAAAACGGGAATGTCATCCAGACGTGGGAGCAACTCAAGATCGAATTAAGGAAGCACTTTCTTCCCCCACAATGCCGAAATGGAGTCAAGAGCCAAACTTCGAAGGCTACGACACACAGGTAACATTCTCGACTATGTGAAGGAATTTACCACTATTATGCTTGAAATTAGTGATTTGCCAGAGAAGGAAGCCCTATTCCAATTCAGAGATGGACTAAAAGATTGGGCCAAGGTTGAGCTAGACCGTCGCAATGTTCAAACATTGGATGACGCTATAGCTGCAACCGAGATACTT

mRNA sequence

GGCCAAGATAAACAATGCCCCGACATTCCTAAGGGATGCCGCACAACTTTGGTGGTGTCGACGGTACGCCGACCAAAACGGGAATGTCATCCAGACGTGGGAGCAACTCAAGATCGAATTAAGGAAGCACTTTCTTCCCCCACAATGCCGAAATGGAGTCAAGAGCCAAACTTCGAAGGCTACGACACACAGTG

Coding sequence (CDS)

GGCCAAGATAAACAATGCCCCGACATTCCTAAGGGATGCCGCACAACTTTGGTGGTGTCGACGGTACGCCGACCAAAACGGGAATGTCATCCAGACGTGGGAGCAACTCAAGATCGAATTAAGGAAGCACTTTCTTCCCCCACAATGCCGAAATGGAGTCAAGAGCCAAACTTCGAAGGCTACGACACACAGTG

Protein sequence

GQDKQCPDIPKGCRTTLVVSTVRRPKRECHPDVGATQDRIKEALSSPTMPKWSQEPNFEGYDTQX
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002910.1CsaV3_7G002910.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..65

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002910Cucumber (Chinese Long) v3cuccucB099
CsaV3_7G002910Silver-seed gourdcarcucB0232
CsaV3_7G002910Silver-seed gourdcarcucB1114
CsaV3_7G002910Cucumber (Gy14) v2cgybcucB094
CsaV3_7G002910Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002910Cucumber (Gy14) v2cgybcucB349
CsaV3_7G002910Cucumber (Gy14) v1cgycucB292
CsaV3_7G002910Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002910Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002910Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002910Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002910Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002910Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002910Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002910Wild cucumber (PI 183967)cpicucB116
CsaV3_7G002910Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002910Wild cucumber (PI 183967)cpicucB419
CsaV3_7G002910Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002910Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002910Melon (DHL92) v3.5.1cucmeB547
CsaV3_7G002910Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002910Melon (DHL92) v3.6.1cucmedB535
CsaV3_7G002910Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G002910Watermelon (Charleston Gray)cucwcgB570
CsaV3_7G002910Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002910Watermelon (97103) v1cucwmB633
CsaV3_7G002910Watermelon (97103) v1cucwmB634
CsaV3_7G002910Watermelon (97103) v2cucwmbB548
CsaV3_7G002910Watermelon (97103) v2cucwmbB549
CsaV3_7G002910Wax gourdcucwgoB694
CsaV3_7G002910Wax gourdcucwgoB695
CsaV3_7G002910Wax gourdcucwgoB703