CsaV3_7G002790 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002790
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 2120000 .. 2120333 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAAAAATTCTTGTTGATGGAAATACCAGCAACAGAAGAGGTTGCCCATGTTGTGATCCTAACACCATTAATGGTGTTCATTATTGTGCAGTTGTTTACTATGACACCTTCAAAAGGTTCTTTGTTAGAGTATTTTTCAAAACTTTCCTATGCTTATTCCATGACCTGGCTCACATATTACATTAGTGACTTTTATTCATTTACTTCCATCTCCAAGTGAGATGCAATTGTCTCTTGTTGCTATTTGAGATTTCAAGATTGAGATCCCAATTGATCGACCAATATGTATTCCATCTGTGTTGGGACTATCTTCTGTGCAATTATGTTAA

mRNA sequence

ATGTCTCAAAAATTCTTGTTGATGGAAATACCAGCAACAGAAGAGGTTGCCCATGTTGTGATCCTAACACCATTAATGGTGTTCATTATTGTGCAGTTGTTTACTATGACACCTTCAAAAGATTTCAAGATTGAGATCCCAATTGATCGACCAATATGTATTCCATCTGTGTTGGGACTATCTTCTGTGCAATTATGTTAA

Coding sequence (CDS)

ATGTCTCAAAAATTCTTGTTGATGGAAATACCAGCAACAGAAGAGGTTGCCCATGTTGTGATCCTAACACCATTAATGGTGTTCATTATTGTGCAGTTGTTTACTATGACACCTTCAAAAGATTTCAAGATTGAGATCCCAATTGATCGACCAATATGTATTCCATCTGTGTTGGGACTATCTTCTGTGCAATTATGTTAA

Protein sequence

MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGLSSVQLC
Homology
[Close]
BLAST of CsaV3_7G002790 vs. NCBI nr
Match: KGN43439.1 (hypothetical protein Csa_7G036440 [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL 60
          MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL
Sbjct: 1  MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL 60

Query: 61 SSVQLC 67
          SSVQLC
Sbjct: 61 SSVQLC 66

[Close]
BLAST of CsaV3_7G002790 vs. TrEMBL
Match: tr|A0A0A0K385|A0A0A0K385_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G036440 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.7e-27
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL 60
          MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL
Sbjct: 1  MSQKFLLMEIPATEEVAHVVILTPLMVFIIVQLFTMTPSKDFKIEIPIDRPICIPSVLGL 60

Query: 61 SSVQLC 67
          SSVQLC
Sbjct: 61 SSVQLC 66

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002790 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43439.11.3e-26100.00hypothetical protein Csa_7G036440 [Cucumis sativus][more]
BLAST of CsaV3_7G002790 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G002790 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K385|A0A0A0K385_CUCSA8.7e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G036440 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002790.1CsaV3_7G002790.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002790Wax gourdcucwgoB694
CsaV3_7G002790Wax gourdcucwgoB695
CsaV3_7G002790Wax gourdcucwgoB703
CsaV3_7G002790Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G002790Silver-seed gourdcarcucB0232
CsaV3_7G002790Silver-seed gourdcarcucB0386
CsaV3_7G002790Silver-seed gourdcarcucB1114
CsaV3_7G002790Cucumber (Gy14) v2cgybcucB306
CsaV3_7G002790Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002790Cucumber (Gy14) v2cgybcucB349
CsaV3_7G002790Cucumber (Gy14) v1cgycucB160
CsaV3_7G002790Cucumber (Gy14) v1cgycucB292
CsaV3_7G002790Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002790Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002790Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G002790Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002790Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002790Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002790Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002790Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002790Wild cucumber (PI 183967)cpicucB375
CsaV3_7G002790Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002790Wild cucumber (PI 183967)cpicucB419
CsaV3_7G002790Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002790Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002790Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G002790Melon (DHL92) v3.5.1cucmeB547
CsaV3_7G002790Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002790Melon (DHL92) v3.6.1cucmedB521
CsaV3_7G002790Melon (DHL92) v3.6.1cucmedB535
CsaV3_7G002790Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G002790Watermelon (Charleston Gray)cucwcgB570
CsaV3_7G002790Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002790Watermelon (97103) v1cucwmB633
CsaV3_7G002790Watermelon (97103) v1cucwmB634
CsaV3_7G002790Watermelon (97103) v2cucwmbB548
CsaV3_7G002790Watermelon (97103) v2cucwmbB549