CsaV3_7G002630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002630
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat
Locationchr7 : 2043473 .. 2044777 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAATGGGTACATGAAAGCAGGGGATTCTAACACGGCAAAAGAATTATTCGATCAGATGCCAGAGAGAAGCCTCGTTACATGGAATTCGATGATCACTGGATATGAGCGGAACAAGCAGTTTACAAAAGCCTTGAAGCTGTTTGAGGTCATGTTGAGAGAAGATATATCACCCAATTATACTACTATCCTTGGAGCTGTTTCTGCAGCTTCAGGAATGGTTAGTCTTGGTACGGGAAGATGGGTTCATTCCTATATAGTGAAAAGTGGATTCAAAACAGATGGTGTGCTCGGCACATTGCTGATAGAAATGTACTCCAAGTGTGGCAGCGTTAAGAGTGCCCTCAGAGTTTTTCGGTCTATACCCAAAAAGAAATTGGGGCATTGGACGTCTGTCATTGTAGGCTTAGGAATGCATGGATTGGTCGAGCAAACTCTTGAGTTATTTGATGAAATGTGCAGAACTGGATTGAAGCCTCATGCTATTACTTTTATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCAGAAGATGCACATCGGTACTTTAAGATGATGACATATGATTATGGAATCAAGCCCTCTATCGAACACTACGGTTGCTTGATCGATGTTCTGTGTCGAGCTGGACATCTTGAAGAGGCAAAGGATACCATTGAGAGAATGCCCATCAAAGCAAACAAAGTAATTTGGACGAGTCTACTAAGTGGTTCAAGGAAACACGGAAACATAAGAATGGGGGAATATGCAGCTCAACATCTGATTGATTTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCCGCTGGCTTGTGGGAAAAGGTTCGGCAAGTAAGAGAAATGATGAAGAAGAAAGGAATGAAAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATTCATGAATTCATCGTGGGAGATAAGTCACATCCTCAAACTGAAGAGATATACATCAAACTATGTGAGATGAAAAAGAAATTGAATGTAGCGGGGCATATTCCCGACACAACTCAAGTTTTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCACGGAAGTCCTATCCGCATCATAAAGAATCTTCGTATCTGCAACGATTGCCATGCTGTGACTAAACTTCTTTCTCATATTTACAACCGTGAGATAATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCTTGTTCATGTAAAGATTTTTGGTGA

mRNA sequence

ATGATTAATGGGTACATGAAAGCAGGGGATTCTAACACGGCAAAAGAATTATTCGATCAGATGCCAGAGAGAAGCCTCGTTACATGGAATTCGATGATCACTGGATATGAGCGGAACAAGCAGTTTACAAAAGCCTTGAAGCTGTTTGAGGTCATGTTGAGAGAAGATATATCACCCAATTATACTACTATCCTTGGAGCTGTTTCTGCAGCTTCAGGAATGGTTAGTCTTGGTACGGGAAGATGGGTTCATTCCTATATAGTGAAAAGTGGATTCAAAACAGATGGTGTGCTCGGCACATTGCTGATAGAAATGTACTCCAAGTGTGGCAGCGTTAAGAGTGCCCTCAGAGTTTTTCGGTCTATACCCAAAAAGAAATTGGGGCATTGGACGTCTGTCATTGTAGGCTTAGGAATGCATGGATTGGTCGAGCAAACTCTTGAGTTATTTGATGAAATGTGCAGAACTGGATTGAAGCCTCATGCTATTACTTTTATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCAGAAGATGCACATCGGTACTTTAAGATGATGACATATGATTATGGAATCAAGCCCTCTATCGAACACTACGGTTGCTTGATCGATGTTCTGTGTCGAGCTGGACATCTTGAAGAGGCAAAGGATACCATTGAGAGAATGCCCATCAAAGCAAACAAAGTAATTTGGACGAGTCTACTAAGTGGTTCAAGGAAACACGGAAACATAAGAATGGGGGAATATGCAGCTCAACATCTGATTGATTTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCCGCTGGCTTGTGGGAAAAGGTTCGGCAAGTAAGAGAAATGATGAAGAAGAAAGGAATGAAAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATTCATGAATTCATCGTGGGAGATAAGTCACATCCTCAAACTGAAGAGATATACATCAAACTATGTGAGATGAAAAAGAAATTGAATGTAGCGGGGCATATTCCCGACACAACTCAAGTTTTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCACGGAAGTCCTATCCGCATCATAAAGAATCTTCGTATCTGCAACGATTGCCATGCTGTGACTAAACTTCTTTCTCATATTTACAACCGTGAGATAATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCTTGTTCATGTAAAGATTTTTGGTGA

Coding sequence (CDS)

ATGATTAATGGGTACATGAAAGCAGGGGATTCTAACACGGCAAAAGAATTATTCGATCAGATGCCAGAGAGAAGCCTCGTTACATGGAATTCGATGATCACTGGATATGAGCGGAACAAGCAGTTTACAAAAGCCTTGAAGCTGTTTGAGGTCATGTTGAGAGAAGATATATCACCCAATTATACTACTATCCTTGGAGCTGTTTCTGCAGCTTCAGGAATGGTTAGTCTTGGTACGGGAAGATGGGTTCATTCCTATATAGTGAAAAGTGGATTCAAAACAGATGGTGTGCTCGGCACATTGCTGATAGAAATGTACTCCAAGTGTGGCAGCGTTAAGAGTGCCCTCAGAGTTTTTCGGTCTATACCCAAAAAGAAATTGGGGCATTGGACGTCTGTCATTGTAGGCTTAGGAATGCATGGATTGGTCGAGCAAACTCTTGAGTTATTTGATGAAATGTGCAGAACTGGATTGAAGCCTCATGCTATTACTTTTATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCAGAAGATGCACATCGGTACTTTAAGATGATGACATATGATTATGGAATCAAGCCCTCTATCGAACACTACGGTTGCTTGATCGATGTTCTGTGTCGAGCTGGACATCTTGAAGAGGCAAAGGATACCATTGAGAGAATGCCCATCAAAGCAAACAAAGTAATTTGGACGAGTCTACTAAGTGGTTCAAGGAAACACGGAAACATAAGAATGGGGGAATATGCAGCTCAACATCTGATTGATTTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCCGCTGGCTTGTGGGAAAAGGTTCGGCAAGTAAGAGAAATGATGAAGAAGAAAGGAATGAAAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATTCATGAATTCATCGTGGGAGATAAGTCACATCCTCAAACTGAAGAGATATACATCAAACTATGTGAGATGAAAAAGAAATTGAATGTAGCGGGGCATATTCCCGACACAACTCAAGTTTTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCACGGAAGTCCTATCCGCATCATAAAGAATCTTCGTATCTGCAACGATTGCCATGCTGTGACTAAACTTCTTTCTCATATTTACAACCGTGAGATAATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCTTGTTCATGTAAAGATTTTTGGTGA

Protein sequence

MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW
Homology
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BLAST of CsaV3_7G002630 vs. NCBI nr
Match: KGN43423.1 (hypothetical protein Csa_7G033310 [Cucumis sativus])

HSP 1 Score: 899.0 bits (2322), Expect = 6.1e-258
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN
Sbjct: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120
           YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR
Sbjct: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120

Query: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180
           SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED
Sbjct: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180

Query: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240
           AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS
Sbjct: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240

Query: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300
           RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG
Sbjct: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300

Query: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360
           CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE
Sbjct: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360

Query: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420
           AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF
Sbjct: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420

Query: 421 HHFKSGSCSCKDFW 435
           HHFKSGSCSCKDFW
Sbjct: 421 HHFKSGSCSCKDFW 434

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BLAST of CsaV3_7G002630 vs. NCBI nr
Match: XP_004144616.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis sativus])

HSP 1 Score: 790.8 bits (2041), Expect = 2.3e-225
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 

Query: 55  EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 114
           EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS
Sbjct: 302 EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 361

Query: 115 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 174
           ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH
Sbjct: 362 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 421

Query: 175 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 234
           AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT
Sbjct: 422 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 481

Query: 235 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 294
           SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 541

Query: 295 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 354
           MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE
Sbjct: 542 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 601

Query: 355 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 414
           EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII
Sbjct: 602 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 661

Query: 415 RDGSRFHHFKSGSCSCKDFW 435
           RDGSRFHHFKSGSCSCKDFW
Sbjct: 662 RDGSRFHHFKSGSCSCKDFW 681

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BLAST of CsaV3_7G002630 vs. NCBI nr
Match: XP_008462083.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis melo])

HSP 1 Score: 762.3 bits (1967), Expect = 8.9e-217
Identity = 365/380 (96.05%), Postives = 375/380 (98.68%), Query Frame = 0 

Query: 55  EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 114
           EDISPNYTTILGAVSAASG+VSLGTGRWVHSYIVK+GFKTDGVLGTLLIEMYSKCGSVKS
Sbjct: 302 EDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVKS 361

Query: 115 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 174
           ALRVFR I KKKLGHWTS+IVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACSH
Sbjct: 362 ALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACSH 421

Query: 175 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 234
           AGFAEDAHRYFKMMT DYGIKP+IEHYGCLIDVLCRAG+LEEAKDTIERMPIKANKVIWT
Sbjct: 422 AGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIWT 481

Query: 235 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 294
           SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAA GLWEKVRQVREMMK+KG
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEKG 541

Query: 295 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 354
           ++KDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKL EMKKKLNVAGHIPDT+QVLLCLE
Sbjct: 542 IRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCLE 601

Query: 355 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 414
           EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII
Sbjct: 602 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 661

Query: 415 RDGSRFHHFKSGSCSCKDFW 435
           RDGSRFHHFKSGSCSCKDFW
Sbjct: 662 RDGSRFHHFKSGSCSCKDFW 681

[Close]
BLAST of CsaV3_7G002630 vs. NCBI nr
Match: XP_022953072.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata] >XP_022953073.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 719.9 bits (1857), Expect = 5.1e-204
Identity = 340/382 (89.01%), Postives = 362/382 (94.76%), Query Frame = 0 

Query: 53  LREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSV 112
           L EDISPN+ T+LGA SAASG+ SLG GRWVHSYIVK+ FKTDGVLGT LIEMYSKCGS+
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 113 KSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 172
           K ALRVF+SIPKKKLGHWT++IVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 173 SHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVI 232
           SHAGFA++A RYFK MT D+GI+PSIEHYGCLID LCRAG+LEEAKDTIERMPIKAN VI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 233 WTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKK 292
           W SLLSGSRKHG+ RMGEYAA HL+DLAPDTTGCYVILSNMYAA GLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGSTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 293 KGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLC 352
           KG++KDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 353 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREI 412
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 413 IIRDGSRFHHFKSGSCSCKDFW 435
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

[Close]
BLAST of CsaV3_7G002630 vs. NCBI nr
Match: XP_022969015.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 719.2 bits (1855), Expect = 8.7e-204
Identity = 339/382 (88.74%), Postives = 361/382 (94.50%), Query Frame = 0 

Query: 53  LREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSV 112
           L EDISPN+ T+LGA+SAASG+ SLG GRWVHSYIVK+ FKTDGVLGT LIEMYSKCGS+
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 113 KSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 172
           K ALRVF+SIPK+KLGHWT++IVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKRKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 173 SHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVI 232
           SHAGFAE+A RYFK MT D+GI+PSIEHYGCLID LCRAG+LEEAKDTIERMPIKAN VI
Sbjct: 421 SHAGFAEEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 233 WTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKK 292
           W SLLSGSRKHGN RMGEYAA HL+DLAPDTTGCYVILSNMYAA GLWE  RQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWENFRQVREMMKK 540

Query: 293 KGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLC 352
           KG++KDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 353 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREI 412
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 413 IIRDGSRFHHFKSGSCSCKDFW 435
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

[Close]
BLAST of CsaV3_7G002630 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-120
Identity = 201/436 (46.10%), Postives = 290/436 (66.51%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           +I+ Y K G+  TA  LF+++P + +++WN++I GY     + +AL LF+ MLR   +PN
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVK--SGFKTDGVLGTLLIEMYSKCGSVKSALRV 120
             T+L  + A + + ++  GRW+H YI K   G      L T LI+MY+KCG +++A +V
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426

Query: 121 FRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFA 180
           F SI  K L  W ++I G  MHG  + + +LF  M + G++P  ITF+G+L+ACSH+G  
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486

Query: 181 EDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLS 240
           +     F+ MT DY + P +EHYGC+ID+L  +G  +EA++ I  M ++ + VIW SLL 
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546

Query: 241 GSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKD 300
             + HGN+ +GE  A++LI + P+  G YV+LSN+YA+AG W +V + R ++  KGMKK 
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606

Query: 301 PGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNE 360
           PGCSSIE    +HEFI+GDK HP+  EIY  L EM+  L  AG +PDT++VL  +EE+  
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE-W 666

Query: 361 KEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGS 420
           KE  L  HSE+LAIAFGL++ K G+ + I+KNLR+C +CH  TKL+S IY REII RD +
Sbjct: 667 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 726

Query: 421 RFHHFKSGSCSCKDFW 435
           RFHHF+ G CSC D+W
Sbjct: 727 RFHHFRDGVCSCNDYW 741

[Close]
BLAST of CsaV3_7G002630 vs. TAIR10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-114
Identity = 200/448 (44.64%), Postives = 289/448 (64.51%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           +I+ Y   G  + A+++FD+MPERSLV+WNSMI    R  ++  AL+LF  M R    P+
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPD 251

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKS---GFKTDGVLGTLLIEMYSKCGSVKSALR 120
             T+   +SA +G+ SL  G W H+++++        D ++   LIEMY KCGS++ A +
Sbjct: 252 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 311

Query: 121 VFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMC--RTGLKPHAITFIGVLNACSHA 180
           VF+ + K+ L  W ++I+G   HG  E+ +  FD M   R  ++P+++TF+G+L AC+H 
Sbjct: 312 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 371

Query: 181 GFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTS 240
           GF     +YF MM  DY I+P++EHYGC++D++ RAG++ EA D +  MP+K + VIW S
Sbjct: 372 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 431

Query: 241 LLSGSRKHG-NIRMGEYAAQHLIDLAPDT-------TGCYVILSNMYAAAGLWEKVRQVR 300
           LL    K G ++ + E  A+++I    D        +G YV+LS +YA+A  W  V  VR
Sbjct: 432 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 491

Query: 301 EMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTT 360
           ++M + G++K+PGCSSIE  G  HEF  GD SHPQT++IY +L  +  +L   G++PD +
Sbjct: 492 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRS 551

Query: 361 QV-LLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSH 420
           Q  L+    D  KE  L  HSERLAIAFGL+N+   +PIRI KNLR+CNDCH VTKL+S 
Sbjct: 552 QAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISK 611

Query: 421 IYNREIIIRDGSRFHHFKSGSCSCKDFW 435
           ++N EII+RD  RFHHFK GSCSC D+W
Sbjct: 612 VFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

[Close]
BLAST of CsaV3_7G002630 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 406.0 bits (1042), Expect = 3.0e-113
Identity = 193/434 (44.47%), Postives = 270/434 (62.21%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           MI+GYM+ GD   A+ LFD                                    DI PN
Sbjct: 214 MIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIRPN 273

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120
           Y T++  + A S + SL  G W+H Y   SG + D VLG+ LI+MYSKCG ++ A+ VF 
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333

Query: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180
            +P++ +  W+++I G  +HG     ++ F +M + G++P  + +I +L ACSH G  E+
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393

Query: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240
             RYF  M    G++P IEHYGC++D+L R+G L+EA++ I  MPIK + VIW +LL   
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453

Query: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300
           R  GN+ MG+  A  L+D+ P  +G YV LSNMYA+ G W +V ++R  MK+K ++KDPG
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513

Query: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360
           CS I+  G +HEF+V D SHP+ +EI   L E+  KL +AG+ P TTQVLL LEE+ +KE
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKE 573

Query: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420
             L  HSE++A AFGL++   G PIRI+KNLRIC DCH+  KL+S +Y R+I +RD  RF
Sbjct: 574 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 633

Query: 421 HHFKSGSCSCKDFW 435
           HHF+ GSCSC D+W
Sbjct: 634 HHFQDGSCSCMDYW 646

[Close]
BLAST of CsaV3_7G002630 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 405.2 bits (1040), Expect = 5.0e-113
Identity = 192/446 (43.05%), Postives = 291/446 (65.25%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVM-------- 60
           +++ Y + G  + A  +F +M +R LVTWN+MITGY  ++    AL L   M        
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505

Query: 61  ---LREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC 120
               R  + PN  T++  + + + + +L  G+ +H+Y +K+   TD  +G+ L++MY+KC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565

Query: 121 GSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVL 180
           G ++ + +VF  IP+K +  W  +I+  GMHG  ++ ++L   M   G+KP+ +TFI V 
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625

Query: 181 NACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKAN 240
            ACSH+G  ++  R F +M  DYG++PS +HY C++D+L RAG ++EA   +  MP   N
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685

Query: 241 KV-IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVRE 300
           K   W+SLL  SR H N+ +GE AAQ+LI L P+    YV+L+N+Y++AGLW+K  +VR 
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 301 MMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQ 360
            MK++G++K+PGCS IEH   +H+F+ GD SHPQ+E++   L  + +++   G++PDT+ 
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 361 VLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIY 420
           VL  +EED EKE  L  HSE+LAIAFG+LN   G+ IR+ KNLR+CNDCH  TK +S I 
Sbjct: 806 VLHNVEED-EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIV 865

Query: 421 NREIIIRDGSRFHHFKSGSCSCKDFW 435
           +REII+RD  RFH FK+G+CSC D+W
Sbjct: 866 DREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of CsaV3_7G002630 vs. TAIR10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 390.6 bits (1002), Expect = 1.3e-108
Identity = 178/437 (40.73%), Postives = 287/437 (65.68%), Query Frame = 0 

Query: 1   MINGYMKAGDSN--TAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRED-I 60
           +++ Y K G+     A+++FDQ+ ++  V++NS+++ Y ++    +A ++F  +++   +
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283

Query: 61  SPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALR 120
           + N  T+   + A S   +L  G+ +H  +++ G + D ++GT +I+MY KCG V++A +
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343

Query: 121 VFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGF 180
            F  +  K +  WT++I G GMHG   + LELF  M  +G++P+ ITF+ VL ACSHAG 
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403

Query: 181 AEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLL 240
             +  R+F  M   +G++P +EHYGC++D+L RAG L++A D I+RM +K + +IW+SLL
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463

Query: 241 SGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKK 300
           +  R H N+ + E +   L +L     G Y++LS++YA AG W+ V +VR +MK +G+ K
Sbjct: 464 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 523

Query: 301 DPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDN 360
            PG S +E  G +H F++GD+ HPQ E+IY  L E+ +KL  AG++ +T+ V   ++E+ 
Sbjct: 524 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE- 583

Query: 361 EKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDG 420
           EKE  L  HSE+LAIAFG++N   GS + ++KNLR+C+DCH V KL+S I +RE ++RD 
Sbjct: 584 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 643

Query: 421 SRFHHFKSGSCSCKDFW 435
            RFHHFK G CSC D+W
Sbjct: 644 KRFHHFKDGGCSCGDYW 659

[Close]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 7.7e-119
Identity = 201/436 (46.10%), Postives = 290/436 (66.51%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           +I+ Y K G+  TA  LF+++P + +++WN++I GY     + +AL LF+ MLR   +PN
Sbjct: 307 LIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVK--SGFKTDGVLGTLLIEMYSKCGSVKSALRV 120
             T+L  + A + + ++  GRW+H YI K   G      L T LI+MY+KCG +++A +V
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 426

Query: 121 FRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFA 180
           F SI  K L  W ++I G  MHG  + + +LF  M + G++P  ITF+G+L+ACSH+G  
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGML 486

Query: 181 EDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLS 240
           +     F+ MT DY + P +EHYGC+ID+L  +G  +EA++ I  M ++ + VIW SLL 
Sbjct: 487 DLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLK 546

Query: 241 GSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKD 300
             + HGN+ +GE  A++LI + P+  G YV+LSN+YA+AG W +V + R ++  KGMKK 
Sbjct: 547 ACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKV 606

Query: 301 PGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNE 360
           PGCSSIE    +HEFI+GDK HP+  EIY  L EM+  L  AG +PDT++VL  +EE+  
Sbjct: 607 PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE-W 666

Query: 361 KEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGS 420
           KE  L  HSE+LAIAFGL++ K G+ + I+KNLR+C +CH  TKL+S IY REII RD +
Sbjct: 667 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRT 726

Query: 421 RFHHFKSGSCSCKDFW 435
           RFHHF+ G CSC D+W
Sbjct: 727 RFHHFRDGVCSCNDYW 741

[Close]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match: sp|Q0WQW5|PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 409.8 bits (1052), Expect = 3.7e-113
Identity = 200/448 (44.64%), Postives = 289/448 (64.51%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           +I+ Y   G  + A+++FD+MPERSLV+WNSMI    R  ++  AL+LF  M R    P+
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPD 251

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKS---GFKTDGVLGTLLIEMYSKCGSVKSALR 120
             T+   +SA +G+ SL  G W H+++++        D ++   LIEMY KCGS++ A +
Sbjct: 252 GYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQ 311

Query: 121 VFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMC--RTGLKPHAITFIGVLNACSHA 180
           VF+ + K+ L  W ++I+G   HG  E+ +  FD M   R  ++P+++TF+G+L AC+H 
Sbjct: 312 VFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHR 371

Query: 181 GFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTS 240
           GF     +YF MM  DY I+P++EHYGC++D++ RAG++ EA D +  MP+K + VIW S
Sbjct: 372 GFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRS 431

Query: 241 LLSGSRKHG-NIRMGEYAAQHLIDLAPDT-------TGCYVILSNMYAAAGLWEKVRQVR 300
           LL    K G ++ + E  A+++I    D        +G YV+LS +YA+A  W  V  VR
Sbjct: 432 LLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVR 491

Query: 301 EMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTT 360
           ++M + G++K+PGCSSIE  G  HEF  GD SHPQT++IY +L  +  +L   G++PD +
Sbjct: 492 KLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRS 551

Query: 361 QV-LLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSH 420
           Q  L+    D  KE  L  HSERLAIAFGL+N+   +PIRI KNLR+CNDCH VTKL+S 
Sbjct: 552 QAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCHEVTKLISK 611

Query: 421 IYNREIIIRDGSRFHHFKSGSCSCKDFW 435
           ++N EII+RD  RFHHFK GSCSC D+W
Sbjct: 612 VFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

[Close]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.3e-112
Identity = 193/434 (44.47%), Postives = 270/434 (62.21%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           MI+GYM+ GD   A+ LFD                                    DI PN
Sbjct: 214 MIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDIRPN 273

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120
           Y T++  + A S + SL  G W+H Y   SG + D VLG+ LI+MYSKCG ++ A+ VF 
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333

Query: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180
            +P++ +  W+++I G  +HG     ++ F +M + G++P  + +I +L ACSH G  E+
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393

Query: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240
             RYF  M    G++P IEHYGC++D+L R+G L+EA++ I  MPIK + VIW +LL   
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453

Query: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300
           R  GN+ MG+  A  L+D+ P  +G YV LSNMYA+ G W +V ++R  MK+K ++KDPG
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513

Query: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360
           CS I+  G +HEF+V D SHP+ +EI   L E+  KL +AG+ P TTQVLL LEE+ +KE
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKE 573

Query: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420
             L  HSE++A AFGL++   G PIRI+KNLRIC DCH+  KL+S +Y R+I +RD  RF
Sbjct: 574 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 633

Query: 421 HHFKSGSCSCKDFW 435
           HHF+ GSCSC D+W
Sbjct: 634 HHFQDGSCSCMDYW 646

[Close]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 405.2 bits (1040), Expect = 9.1e-112
Identity = 192/446 (43.05%), Postives = 291/446 (65.25%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVM-------- 60
           +++ Y + G  + A  +F +M +R LVTWN+MITGY  ++    AL L   M        
Sbjct: 446 LMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505

Query: 61  ---LREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKC 120
               R  + PN  T++  + + + + +L  G+ +H+Y +K+   TD  +G+ L++MY+KC
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKC 565

Query: 121 GSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVL 180
           G ++ + +VF  IP+K +  W  +I+  GMHG  ++ ++L   M   G+KP+ +TFI V 
Sbjct: 566 GCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVF 625

Query: 181 NACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKAN 240
            ACSH+G  ++  R F +M  DYG++PS +HY C++D+L RAG ++EA   +  MP   N
Sbjct: 626 AACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFN 685

Query: 241 KV-IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVRE 300
           K   W+SLL  SR H N+ +GE AAQ+LI L P+    YV+L+N+Y++AGLW+K  +VR 
Sbjct: 686 KAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 301 MMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQ 360
            MK++G++K+PGCS IEH   +H+F+ GD SHPQ+E++   L  + +++   G++PDT+ 
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 361 VLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIY 420
           VL  +EED EKE  L  HSE+LAIAFG+LN   G+ IR+ KNLR+CNDCH  TK +S I 
Sbjct: 806 VLHNVEED-EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIV 865

Query: 421 NREIIIRDGSRFHHFKSGSCSCKDFW 435
           +REII+RD  RFH FK+G+CSC D+W
Sbjct: 866 DREIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match: sp|Q9LW32|PP258_ARATH (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.3e-107
Identity = 178/437 (40.73%), Postives = 287/437 (65.68%), Query Frame = 0 

Query: 1   MINGYMKAGDSN--TAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRED-I 60
           +++ Y K G+     A+++FDQ+ ++  V++NS+++ Y ++    +A ++F  +++   +
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283

Query: 61  SPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALR 120
           + N  T+   + A S   +L  G+ +H  +++ G + D ++GT +I+MY KCG V++A +
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343

Query: 121 VFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGF 180
            F  +  K +  WT++I G GMHG   + LELF  M  +G++P+ ITF+ VL ACSHAG 
Sbjct: 344 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 403

Query: 181 AEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLL 240
             +  R+F  M   +G++P +EHYGC++D+L RAG L++A D I+RM +K + +IW+SLL
Sbjct: 404 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 463

Query: 241 SGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKK 300
           +  R H N+ + E +   L +L     G Y++LS++YA AG W+ V +VR +MK +G+ K
Sbjct: 464 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 523

Query: 301 DPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDN 360
            PG S +E  G +H F++GD+ HPQ E+IY  L E+ +KL  AG++ +T+ V   ++E+ 
Sbjct: 524 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE- 583

Query: 361 EKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDG 420
           EKE  L  HSE+LAIAFG++N   GS + ++KNLR+C+DCH V KL+S I +RE ++RD 
Sbjct: 584 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 643

Query: 421 SRFHHFKSGSCSCKDFW 435
            RFHHFK G CSC D+W
Sbjct: 644 KRFHHFKDGGCSCGDYW 659

[Close]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match: tr|A0A0A0K1U1|A0A0A0K1U1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G033310 PE=4 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 4.1e-258
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0 

Query: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60
           MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN
Sbjct: 1   MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 60

Query: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120
           YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR
Sbjct: 61  YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 120

Query: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180
           SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED
Sbjct: 121 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED 180

Query: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240
           AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS
Sbjct: 181 AHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGS 240

Query: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300
           RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG
Sbjct: 241 RKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPG 300

Query: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360
           CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE
Sbjct: 301 CSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKE 360

Query: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420
           AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF
Sbjct: 361 AELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRF 420

Query: 421 HHFKSGSCSCKDFW 435
           HHFKSGSCSCKDFW
Sbjct: 421 HHFKSGSCSCKDFW 434

[Close]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match: tr|A0A1S3CG66|A0A1S3CG66_CUCME (pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=3656 GN=LOC103500522 PE=4 SV=1)

HSP 1 Score: 762.3 bits (1967), Expect = 5.9e-217
Identity = 365/380 (96.05%), Postives = 375/380 (98.68%), Query Frame = 0 

Query: 55  EDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKS 114
           EDISPNYTTILGAVSAASG+VSLGTGRWVHSYIVK+GFKTDGVLGTLLIEMYSKCGSVKS
Sbjct: 302 EDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVKS 361

Query: 115 ALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 174
           ALRVFR I KKKLGHWTS+IVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACSH
Sbjct: 362 ALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACSH 421

Query: 175 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 234
           AGFAEDAHRYFKMMT DYGIKP+IEHYGCLIDVLCRAG+LEEAKDTIERMPIKANKVIWT
Sbjct: 422 AGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIWT 481

Query: 235 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 294
           SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAA GLWEKVRQVREMMK+KG
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEKG 541

Query: 295 MKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLE 354
           ++KDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKL EMKKKLNVAGHIPDT+QVLLCLE
Sbjct: 542 IRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCLE 601

Query: 355 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 414
           EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII
Sbjct: 602 EDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIII 661

Query: 415 RDGSRFHHFKSGSCSCKDFW 435
           RDGSRFHHFKSGSCSCKDFW
Sbjct: 662 RDGSRFHHFKSGSCSCKDFW 681

[Close]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match: tr|W9SJH5|W9SJH5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020017 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 3.3e-167
Identity = 270/382 (70.68%), Postives = 328/382 (85.86%), Query Frame = 0 

Query: 53  LREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSV 112
           L+E + PN+TT +GA+SA SG+  L  G+W+HS +VK G +++GVLGT LIEMYSKCGSV
Sbjct: 305 LKEGLVPNHTTFVGALSAVSGLAVLSKGKWIHSLMVKCGIESEGVLGTSLIEMYSKCGSV 364

Query: 113 KSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 172
           +SAL VFR+I KKKLGHWT++IVGLGMHG+ E+ LE+F EM RTGL+PHAITF+GVLNAC
Sbjct: 365 ESALSVFRAISKKKLGHWTAIIVGLGMHGMAERALEMFSEMRRTGLQPHAITFLGVLNAC 424

Query: 173 SHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVI 232
           SHAG  E    YF MMT DYGI+P+IEHYGCL+ +LCR G+LEEAKD IE MP++ NKVI
Sbjct: 425 SHAGLVELVRHYFNMMTNDYGIEPTIEHYGCLVFILCRVGNLEEAKDIIEGMPMRPNKVI 484

Query: 233 WTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKK 292
           W SLLSGSR  GNI +GEYAAQ LI++AP+T GCYV+LSNMYAAAG W+KV  +REMMKK
Sbjct: 485 WMSLLSGSRNFGNINIGEYAAQRLIEVAPETIGCYVVLSNMYAAAGKWDKVSSIREMMKK 544

Query: 293 KGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLC 352
           +G+KK+PGCS IEH+G +HEFIVGDKS  QT+EIY K+ EM+++L  AGH+PDT+QVLLC
Sbjct: 545 RGIKKEPGCSYIEHKGMLHEFIVGDKSDTQTKEIYAKMSEMRERLKSAGHVPDTSQVLLC 604

Query: 353 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREI 412
           LE++ EKEAELE HSERLAIAFGL+N++ GSPIRIIKNLR+CNDCH++TKLLS +YNREI
Sbjct: 605 LEDEKEKEAELENHSERLAIAFGLINVEPGSPIRIIKNLRVCNDCHSITKLLSDLYNREI 664

Query: 413 IIRDGSRFHHFKSGSCSCKDFW 435
           I+RD SRFHHFK+G CSCKDFW
Sbjct: 665 IVRDNSRFHHFKNGLCSCKDFW 686

[Close]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match: tr|V4U4X2|V4U4X2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014482mg PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 9.6e-167
Identity = 270/376 (71.81%), Postives = 321/376 (85.37%), Query Frame = 0 

Query: 59  PNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRV 118
           PN  T++ A+SA +G+  L  GRW+HSYIVK+GF  DGVLGTLLI+MYSKCGS++SAL V
Sbjct: 314 PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTV 373

Query: 119 FRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFA 178
           FR+I KKK+GHWT++IVGLGMHG+  Q L LF++MCR G+KP AITFIGVLNACSHAG  
Sbjct: 374 FRAISKKKVGHWTAMIVGLGMHGMATQALYLFNKMCRMGMKPIAITFIGVLNACSHAGLV 433

Query: 179 EDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLS 238
            D HRYF MM  DYGI+P+IEHYGCL+D+LCR G+LEEAK TI  MP++ N VIW SLLS
Sbjct: 434 NDGHRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIGSMPMRPNFVIWMSLLS 493

Query: 239 GSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKD 298
           G+R HGN  +GEYAA +LI +APDT GCYV+LSN+YAAAG W+KV +VREMMKK+G +KD
Sbjct: 494 GARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKD 553

Query: 299 PGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNE 358
           PG SSIEH+G +HEF+VGDKSHPQT+EI+ KL EM+ KL  AGH+PDTTQVLLC+E+  E
Sbjct: 554 PGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKE 613

Query: 359 KEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGS 418
           KEAELE HSERLAIAFGL+N+K  SPIRI+KNLR+CNDCH+VTKLLS IYNREII+RD S
Sbjct: 614 KEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNS 673

Query: 419 RFHHFKSGSCSCKDFW 435
           RFHHFK+GSCSCKDFW
Sbjct: 674 RFHHFKNGSCSCKDFW 689

[Close]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match: tr|M5WSB1|M5WSB1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005588mg PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 9.6e-167
Identity = 275/452 (60.84%), Postives = 347/452 (76.77%), Query Frame = 0 

Query: 14  AKELFDQMPERSLVTWNSMITGYERNKQF------------------------------- 73
           A+E+FD+MP R+LV+WN+MI GY ++  F                               
Sbjct: 2   AREIFDRMPNRNLVSWNAMINGYMKSGDFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 61

Query: 74  TKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLL 133
                            ++ T++ A+SA SG+ +L  GRW+HS++VK GF  DGVLGT L
Sbjct: 62  XXXXXXXXXXXXXXXXXSHATLVSALSAVSGLATLSKGRWIHSFMVKHGFDLDGVLGTSL 121

Query: 134 IEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHA 193
           IE+YSKCGS++SAL VFR+I +KKLGHWT++IVGLGMHG+ +Q LELF EM + G++PH+
Sbjct: 122 IELYSKCGSIESALAVFRAIDRKKLGHWTAIIVGLGMHGMADQVLELFLEMRKNGMRPHS 181

Query: 194 ITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIE 253
           ITFIGVLNACSHAG  +    YF +M  DY I+P+IEHYGC +D+LCRAG L+EAK+ IE
Sbjct: 182 ITFIGVLNACSHAGLVDLGRYYFNLMINDYEIEPTIEHYGCFVDILCRAGCLDEAKNVIE 241

Query: 254 RMPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEK 313
            MP+K NKVIW SLLSG+R  GN+ +G+YAA+HLID++PDT GCYV+LSNMYAAA  WEK
Sbjct: 242 GMPMKPNKVIWMSLLSGARNQGNVEVGDYAARHLIDVSPDTVGCYVLLSNMYAAADKWEK 301

Query: 314 VRQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGH 373
           V QVRE+M+K+G+KKDPGCSSIEH+G +H FIVGDKSHP+T++IY KL EM++KL   GH
Sbjct: 302 VSQVREIMRKRGVKKDPGCSSIEHRGVLHGFIVGDKSHPRTKDIYSKLTEMREKLKSEGH 361

Query: 374 IPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK 433
           +PDT+QVLLCLEE+ EKEAELE HSERLAIA+GL+N++ GSPIRIIKNLR+CNDCH+VTK
Sbjct: 362 VPDTSQVLLCLEEEKEKEAELENHSERLAIAYGLINLESGSPIRIIKNLRVCNDCHSVTK 421

Query: 434 LLSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 435
           LLS IY+REII+RD SRFHHF++GSCSCKDFW
Sbjct: 422 LLSSIYDREIIVRDNSRFHHFRNGSCSCKDFW 453

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002630 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43423.16.1e-258100.00hypothetical protein Csa_7G033310 [Cucumis sativus][more]
XP_004144616.12.3e-225100.00PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis s... [more]
XP_008462083.18.9e-21796.05PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Cucumis m... [more]
XP_022953072.15.1e-20489.01pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... [more]
XP_022969015.18.7e-20488.74pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucur... [more]
BLAST of CsaV3_7G002630 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08070.14.3e-12046.10Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G59720.12.0e-11444.64Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.13.0e-11344.47Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G57430.15.0e-11343.05Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G26782.11.3e-10840.73Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_7G002630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LN01|PPR21_ARATH7.7e-11946.10Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q0WQW5|PPR85_ARATH3.7e-11344.64Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
sp|Q9FI80|PP425_ARATH5.3e-11244.47Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q7Y211|PP285_ARATH9.1e-11243.05Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
sp|Q9LW32|PP258_ARATH2.3e-10740.73Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
BLAST of CsaV3_7G002630 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K1U1|A0A0A0K1U1_CUCSA4.1e-258100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G033310 PE=4 SV=1[more]
tr|A0A1S3CG66|A0A1S3CG66_CUCME5.9e-21796.05pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=36... [more]
tr|W9SJH5|W9SJH5_9ROSA3.3e-16770.68Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_020017 PE=4 SV=1[more]
tr|V4U4X2|V4U4X2_9ROSI9.6e-16771.81Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10014482mg PE=4 ... [more]
tr|M5WSB1|M5WSB1_PRUPE9.6e-16760.84Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa005588mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002630.1CsaV3_7G002630.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 193..224
e-value: 1.5E-6
score: 27.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 27..60
e-value: 9.3E-9
score: 32.9
coord: 164..197
e-value: 0.0012
score: 16.8
coord: 1..26
e-value: 7.9E-5
score: 20.6
coord: 201..224
e-value: 2.0E-4
score: 19.3
coord: 130..160
e-value: 2.1E-5
score: 22.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 129..157
e-value: 4.1E-4
score: 20.3
coord: 164..188
e-value: 0.17
score: 12.1
coord: 1..24
e-value: 2.4E-4
score: 21.1
coord: 100..125
e-value: 0.12
score: 12.5
coord: 266..294
e-value: 0.044
score: 13.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 25..63
e-value: 5.1E-9
score: 36.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 161..196
score: 7.07
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 263..297
score: 8.495
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1..24
score: 8.177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..160
score: 9.909
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 25..59
score: 12.233
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 8.736
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 95..125
score: 7.213
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..72
e-value: 7.1E-16
score: 60.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 73..190
e-value: 2.4E-24
score: 88.4
coord: 191..349
e-value: 7.6E-17
score: 63.8
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 299..424
e-value: 2.8E-36
score: 124.1
NoneNo IPR availablePANTHERPTHR44853FAMILY NOT NAMEDcoord: 153..434

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002630CSPI07G02800Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002630Cucsa.100410Cucumber (Gy14) v1cgycucB116
CsaV3_7G002630CmaCh19G008670Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002630CmoCh19G008810Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002630CsGy7G002420Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002630Carg04154Silver-seed gourdcarcucB0232
CsaV3_7G002630Cla015679Watermelon (97103) v1cucwmB634
CsaV3_7G002630ClCG02G002740Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002630Lsi11G013560Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002630Cla97C02G029230Watermelon (97103) v2cucwmbB549
CsaV3_7G002630Bhi05G001282Wax gourdcucwgoB695
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002630Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G002630Silver-seed gourdcarcucB0386
CsaV3_7G002630Silver-seed gourdcarcucB1114
CsaV3_7G002630Cucumber (Gy14) v2cgybcucB306
CsaV3_7G002630Cucumber (Gy14) v1cgycucB160
CsaV3_7G002630Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002630Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G002630Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002630Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G002630Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002630Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002630Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002630Wild cucumber (PI 183967)cpicucB375
CsaV3_7G002630Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002630Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G002630Melon (DHL92) v3.5.1cucmeB548
CsaV3_7G002630Melon (DHL92) v3.6.1cucmedB521
CsaV3_7G002630Melon (DHL92) v3.6.1cucmedB536
CsaV3_7G002630Wax gourdcucwgoB703