CsaV3_7G002190 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002190
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAT-hook motif nuclear-localized protein
Locationchr7 : 1744518 .. 1746166 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAATTAGTATAATATGTTTAAAACTAAGTTGAAAATCTAAAAGGAAAAGGAAAAACATTTTCGAGTTTCATATGGACGGATTGAGCAAATTCTTCCTATTTTATTAACTCTATAAACAACCAAAGGATTTCATCCTTTCAACAACACAGACAATAATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTAAAAGTTTTTAAATCTATCAGATTTCAATTTTATAAAATATCAAAATAAATATTCGATAAAATAATTAACAAATAAATAATTTTTTAAATTCACATAATAAGCAAAGAGTAAAAGAAAAGGAAAATTATAATTTGCTTAACATTTATAGTAAGAGTTAGGAGATGGCCAAAATGAGTTTGGGTTACCATATTGACATATCATAATAAGAATGGGGTTAGTGAAAAATAGTATCACTTAGCTATGCCCCTTGCTCTCGTTTTGGACTAATTTCAGTATCTTAGGCTTTCCATGTTAGCTAGTAGTTTTAATCAATTCCTAATATATGATTGAACAATCTTTCCTATAATATATGATTAAATACTAATTTCGATTTAACACTCATTTTGTTTAGTTATACCCAAGTCTCTCGAGAAAAAATTCTCCGATTATAATAAACAAATACACAATTTGTTTACATGTTACTTAGAAATGGTTGCAACTTTTTAAAGTTTTATTGCACTTTTTGAATCGTTACGAAAACAACGGTTGTTTGTGGCTCAATTGTAGTTTGAATCTCACTTCATAATTGAATATGATATATCGTGTATAGTGAAAATATGATTTATCAACATGTCAACAAAAATTTAATATCCTAATATTATAGGTGGAGGTGGCCAACTTAGGGGTATCGAAAGCTTCAACCTTCGTGACGATGGTTACGGTTGGAACAACAATGCATCAAGACCTCCGACAACACTCTGATAAAAAAAATGAGAAAAGGTTTAGAAGAAAATCAAACAAATTTTCCTAAGAAATTCGAACGCCTTTTCAATAATGGTCTCC

mRNA sequence

ATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTGGAGGTGGCCAACTTAGGGGTATCGAAAGCTTCAACCTTCGTGACGATGGTTACGGTTGGAACAACAATGCATCAAGACCTCCGACAACACTCTGA

Coding sequence (CDS)

ATGTCTGATTTGAACTCCGCCGTCCACGGCGCCTCCTCCCGCAACGCCAATCAATTTCTCGGTTCAGACCTCCAACTTCAAAACTTCTCACAAACCCATCTTCCCGATCCCAATTCTGCCGATTCAACCACTCCCACCACCGGCGGTTCATCCTCGCGCCGCCCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATCGTAACACGTGACAGCCCCAACTCTCTGAGGTCGCACGTGCTAGAGGTTTCCCCAGGCTCCGATGTGGTTGAATCCATCTCGACTTACGTCACCCGCCGCCGCTACGGCGTTTGCATTCTCGGCGGCACTGGCGCCGTCACCAACGTCAACTTGCGTCAGCCGATGTCTCCGTCGGGTTCTGTTATGACTCTTCATGGAACATTTGAGATTGTGTCTCTGACTGGCACGGCGTTGCCGCCTTCGGGTGCTGGAGGGCTAACGATTTATTTGGCCGACAGGCAACGGCAAGGACATGTCGTCGGAGGAAGCGTCGTCGGGCCATTGAGGGCATCGAGTCCAGTTACACTGATGGTGGCATCGTTTACGAATGCAGTGTATGATCGGCTACCGGTGGAGGAGGCAGAGCCGCCGGTACAAGCTCAGGCATCGGCGTCGCCATCTTCAGATATTACTGGTGGAGGTGGCCAACTTAGGGGTATCGAAAGCTTCAACCTTCGTGACGATGGTTACGGTTGGAACAACAATGCATCAAGACCTCCGACAACACTCTGA

Protein sequence

MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQLRGIESFNLRDDGYGWNNNASRPPTTL
Homology
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BLAST of CsaV3_7G002190 vs. NCBI nr
Match: XP_004144628.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like [Cucumis sativus])

HSP 1 Score: 496.9 bits (1278), Expect = 4.1e-137
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQLRGIESFNLRDDG 240
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQLRGIESFNLRDDG
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQLRGIESFNLRDDG 240

Query: 241 YGWNNNASRPPTTL 255
           YGWNNNASRPPTTL
Sbjct: 241 YGWNNNASRPPTTL 254

[Close]
BLAST of CsaV3_7G002190 vs. NCBI nr
Match: KGN43375.1 (hypothetical protein Csa_7G029400 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 2.8e-117
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 224
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 223

[Close]
BLAST of CsaV3_7G002190 vs. NCBI nr
Match: XP_008451183.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X1 [Cucumis melo])

HSP 1 Score: 349.7 bits (896), Expect = 8.1e-93
Identity = 193/267 (72.28%), Postives = 210/267 (78.65%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQ 240
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S   +        Q
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPS---TXXXXXXXXQ 240

Query: 241 LRGIESFNLRDDGYGWNNNASRPPTTL 255
           L  I SFN RD+GY WNNN SRPPTTL
Sbjct: 241 LGDIGSFNFRDNGYRWNNNTSRPPTTL 264

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BLAST of CsaV3_7G002190 vs. NCBI nr
Match: XP_016901052.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X3 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 9.0e-84
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDI 222
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS +
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSSGV 234

[Close]
BLAST of CsaV3_7G002190 vs. NCBI nr
Match: XP_008451184.1 (PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDI 222
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS +
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSSGL 234

[Close]
BLAST of CsaV3_7G002190 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 194.5 bits (493), Expect = 7.9e-50
Identity = 97/158 (61.39%), Postives = 125/158 (79.11%), Query Frame = 0 

Query: 52  SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCIL 111
           +RRPRGRPAGSKNKPK P+I+TRDS N+LR+HV+E+  G D+V+ ++T+  RR+ GVC++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 112 GGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQG 171
            GTG+VTNV +RQP SP GSV++LHG FEI+SL+G+ LP   P  A GL++YLA    QG
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAG--GQG 236

Query: 172 HVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
            VVGGSVVGPL  S PV +M ASF+NA Y+RLP+EE E
Sbjct: 237 QVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDE 272

[Close]
BLAST of CsaV3_7G002190 vs. TAIR10
Match: AT4G35390.1 (AT-hook protein of GA feedback 1)

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 101/145 (69.66%), Postives = 116/145 (80.00%), Query Frame = 0 

Query: 63  KNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNL 122
           KNKPKPP I+TRDSPN LRSHVLEV+ GSD+ E++STY TRR  GVCI+ GTGAVTNV +
Sbjct: 73  KNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVTNVTI 132

Query: 123 RQPMSPS-GSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGSVVGP 182
           RQP +P+ G V+TLHG F+I+SLTGTALP   P GAGGLT+YLA    QG VVGG+V G 
Sbjct: 133 RQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAG--GQGQVVGGNVAGS 192

Query: 183 LRASSPVTLMVASFTNAVYDRLPVE 204
           L AS PV LM ASF NAVYDRLP+E
Sbjct: 193 LIASGPVVLMAASFANAVYDRLPIE 215

[Close]
BLAST of CsaV3_7G002190 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 191.0 bits (484), Expect = 8.7e-49
Identity = 100/160 (62.50%), Postives = 127/160 (79.38%), Query Frame = 0 

Query: 52  SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCIL 111
           +RRPRGRPAGSKNKPKPP+I+TRDS N+LR+HV+E+  G D+VES++T+  RR+ GVC++
Sbjct: 104 TRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVM 163

Query: 112 GGTGAVTNVNLRQPMS-PS-GSVMTLHGTFEIVSLTGTALPPSG---AGGLTIYLADRQR 171
            GTG VTNV +RQP S PS GSV++LHG FEI+SL+G+ LPP     A GL++YLA    
Sbjct: 164 SGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAG--G 223

Query: 172 QGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
           QG VVGGSVVGPL  + PV +M ASF+NA Y+RLP+EE E
Sbjct: 224 QGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDE 261

[Close]
BLAST of CsaV3_7G002190 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22)

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-48
Identity = 101/172 (58.72%), Postives = 126/172 (73.26%), Query Frame = 0 

Query: 55  PRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGT 114
           PRGRPAGSKNKPKPP+I+TRDS N+L+SHV+EV+ G DV+ES++ +  RR+ G+C+L G 
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 115 GAVTNVNLRQPMSPSG---SVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQG 174
           GAVTNV +RQP S  G   SV+ LHG FEI+SL+G+ LP   P  A GLTIYLA    QG
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAG--GQG 210

Query: 175 HVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSD 221
            VVGGSVVGPL AS PV +M ASF NA Y+RLP+EE +   Q   + + + D
Sbjct: 211 QVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNID 260

[Close]
BLAST of CsaV3_7G002190 vs. TAIR10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 186.0 bits (471), Expect = 2.8e-47
Identity = 98/155 (63.23%), Postives = 121/155 (78.06%), Query Frame = 0 

Query: 55  PRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGT 114
           PRGRPAGSKNKPKPPVIVTR+S N+LR+H+LEV  G DV E ISTY  RR+ G+C+L GT
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 115 GAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVV 174
           G VTNV++RQP + +G+V+TL GTFEI+SL+G+ LP   P GA  LTI+LA    QG VV
Sbjct: 140 GTVTNVSIRQP-TAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAG--AQGQVV 199

Query: 175 GGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
           GG+VVG L A+ PV +M ASFTN  Y+RLP++E E
Sbjct: 200 GGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHE 231

[Close]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-48
Identity = 97/158 (61.39%), Postives = 125/158 (79.11%), Query Frame = 0 

Query: 52  SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCIL 111
           +RRPRGRPAGSKNKPK P+I+TRDS N+LR+HV+E+  G D+V+ ++T+  RR+ GVC++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 112 GGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQG 171
            GTG+VTNV +RQP SP GSV++LHG FEI+SL+G+ LP   P  A GL++YLA    QG
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAG--GQG 236

Query: 172 HVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
            VVGGSVVGPL  S PV +M ASF+NA Y+RLP+EE E
Sbjct: 237 QVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDE 272

[Close]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match: sp|Q6DBQ1|AHL25_ARATH (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AHL25 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-48
Identity = 101/145 (69.66%), Postives = 116/145 (80.00%), Query Frame = 0 

Query: 63  KNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNVNL 122
           KNKPKPP I+TRDSPN LRSHVLEV+ GSD+ E++STY TRR  GVCI+ GTGAVTNV +
Sbjct: 73  KNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVTNVTI 132

Query: 123 RQPMSPS-GSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVVGGSVVGP 182
           RQP +P+ G V+TLHG F+I+SLTGTALP   P GAGGLT+YLA    QG VVGG+V G 
Sbjct: 133 RQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAG--GQGQVVGGNVAGS 192

Query: 183 LRASSPVTLMVASFTNAVYDRLPVE 204
           L AS PV LM ASF NAVYDRLP+E
Sbjct: 193 LIASGPVVLMAASFANAVYDRLPIE 215

[Close]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-47
Identity = 100/160 (62.50%), Postives = 127/160 (79.38%), Query Frame = 0 

Query: 52  SRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCIL 111
           +RRPRGRPAGSKNKPKPP+I+TRDS N+LR+HV+E+  G D+VES++T+  RR+ GVC++
Sbjct: 104 TRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVM 163

Query: 112 GGTGAVTNVNLRQPMS-PS-GSVMTLHGTFEIVSLTGTALPPSG---AGGLTIYLADRQR 171
            GTG VTNV +RQP S PS GSV++LHG FEI+SL+G+ LPP     A GL++YLA    
Sbjct: 164 SGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAG--G 223

Query: 172 QGHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
           QG VVGGSVVGPL  + PV +M ASF+NA Y+RLP+EE E
Sbjct: 224 QGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDE 261

[Close]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-47
Identity = 101/172 (58.72%), Postives = 126/172 (73.26%), Query Frame = 0 

Query: 55  PRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGT 114
           PRGRPAGSKNKPKPP+I+TRDS N+L+SHV+EV+ G DV+ES++ +  RR+ G+C+L G 
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 115 GAVTNVNLRQPMSPSG---SVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQG 174
           GAVTNV +RQP S  G   SV+ LHG FEI+SL+G+ LP   P  A GLTIYLA    QG
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAG--GQG 210

Query: 175 HVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSD 221
            VVGGSVVGPL AS PV +M ASF NA Y+RLP+EE +   Q   + + + D
Sbjct: 211 QVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNID 260

[Close]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match: sp|O82166|AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 5.1e-46
Identity = 98/155 (63.23%), Postives = 121/155 (78.06%), Query Frame = 0 

Query: 55  PRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGT 114
           PRGRPAGSKNKPKPPVIVTR+S N+LR+H+LEV  G DV E ISTY  RR+ G+C+L GT
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 115 GAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVV 174
           G VTNV++RQP + +G+V+TL GTFEI+SL+G+ LP   P GA  LTI+LA    QG VV
Sbjct: 140 GTVTNVSIRQP-TAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAG--AQGQVV 199

Query: 175 GGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAE 207
           GG+VVG L A+ PV +M ASFTN  Y+RLP++E E
Sbjct: 200 GGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHE 231

[Close]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match: tr|A0A0A0K104|A0A0A0K104_CUCSA (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_7G029400 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.8e-117
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60
           MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA
Sbjct: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDPNSADSTTPTTGGSSSRRPRGRPA 60

Query: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120
           GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV
Sbjct: 61  GSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGTGAVTNV 120

Query: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180
           NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR
Sbjct: 121 NLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYLADRQRQGHVVGGSVVGPLR 180

Query: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 224
           ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG
Sbjct: 181 ASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITG 223

[Close]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match: tr|A0A1S3BQW4|A0A1S3BQW4_CUCME (AT-hook motif nuclear-localized protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 5.4e-93
Identity = 193/267 (72.28%), Postives = 210/267 (78.65%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDITGGGGQ 240
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S   +        Q
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPS---TXXXXXXXXQ 240

Query: 241 LRGIESFNLRDDGYGWNNNASRPPTTL 255
           L  I SFN RD+GY WNNN SRPPTTL
Sbjct: 241 LGDIGSFNFRDNGYRWNNNTSRPPTTL 264

[Close]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match: tr|A0A1S4DYJ1|A0A1S4DYJ1_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 5.9e-84
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDI 222
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS +
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSSGV 234

[Close]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match: tr|A0A1S3BRN2|A0A1S3BRN2_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103492556 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 7.8e-84
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 0 

Query: 1   MSDLNSAVHGASSRNANQFLGSDLQLQNFSQTHLPDP-----------NSADSTTPTTGG 60
           MSDLNSAVHG SSR A+QFLGS+LQLQNFSQTHL DP           NSADS TPT+GG
Sbjct: 1   MSDLNSAVHGDSSRYADQFLGSELQLQNFSQTHLGDPNISPETHQQNLNSADSNTPTSGG 60

Query: 61  SSSRRPRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVC 120
           SS+RRPRGRPAGSKNKPKPPVIVTRDSP ++RS VLEV  G DVVESIS+Y TRRR+GVC
Sbjct: 61  SSTRRPRGRPAGSKNKPKPPVIVTRDSPYAMRSLVLEVPAGYDVVESISSYATRRRHGVC 120

Query: 121 ILGGTGAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALPPSGAGGLTIYL--ADRQRQ 180
           ILGGTGAVTNV LRQP +PSG+ M+  GTFEIVSLTGTALP SGAGGLTIYL     QR+
Sbjct: 121 ILGGTGAVTNVKLRQPAAPSGTAMSFRGTFEIVSLTGTALPSSGAGGLTIYLTGGPGQRE 180

Query: 181 GHVVGGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASASPSSDI 222
           G V+GGSV+GPL ASSPV LMVASFTNAV DRLP +EAEPPVQ   S S SS +
Sbjct: 181 GQVIGGSVLGPLTASSPVILMVASFTNAVSDRLPPDEAEPPVQVHPSTSSSSGL 234

[Close]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match: tr|A0A2P4MVU6|A0A2P4MVU6_QUESU (AT-hook motif nuclear-localized protein OS=Quercus suber OX=58331 GN=CFP56_26338 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.3e-62
Identity = 142/225 (63.11%), Postives = 164/225 (72.89%), Query Frame = 0 

Query: 6   SAVHGASSRNANQFLGSDLQLQNFSQTHLPDPN---------SADSTTPTT--GGSSSRR 65
           S +  A SR  +Q LG +LQLQ  SQ  L D           S D   PTT  G +SSRR
Sbjct: 2   SGLEPAGSRYVHQLLGPELQLQRQSQPQLTDSKHSPEKEQIPSTDPDAPTTSSGATSSRR 61

Query: 66  PRGRPAGSKNKPKPPVIVTRDSPNSLRSHVLEVSPGSDVVESISTYVTRRRYGVCILGGT 125
           PRGRPAGSKNKPKPP+I+T+DSPN+L+SHVLEVS GSD+VES+S Y  RR  GVC+L G+
Sbjct: 62  PRGRPAGSKNKPKPPIIITQDSPNALKSHVLEVSAGSDIVESVSNYALRRGRGVCVLSGS 121

Query: 126 GAVTNVNLRQPMSPSGSVMTLHGTFEIVSLTGTALP---PSGAGGLTIYLADRQRQGHVV 185
           G+VTNV LRQP SP+GSV+TLHG F+I+SLTGTALP   P GAGGLTI+LA    QG V+
Sbjct: 122 GSVTNVTLRQPASPAGSVVTLHGRFDILSLTGTALPPPAPPGAGGLTIFLAG--GQGQVM 181

Query: 186 GGSVVGPLRASSPVTLMVASFTNAVYDRLPVEEAEPPVQAQASAS 217
           GGSVV PL ASS V LMVASF NAVYDR P+EE E  VQ Q +AS
Sbjct: 182 GGSVVSPLTASSSVLLMVASFANAVYDRFPLEEEESGVQVQPTAS 224

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144628.14.1e-137100.00PREDICTED: AT-hook motif nuclear-localized protein 25-like [Cucumis sativus][more]
KGN43375.12.8e-117100.00hypothetical protein Csa_7G029400 [Cucumis sativus][more]
XP_008451183.18.1e-9372.28PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X1 [Cucumis m... [more]
XP_016901052.19.0e-8474.79PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X3 [Cucumis m... [more]
XP_008451184.11.2e-8374.79PREDICTED: AT-hook motif nuclear-localized protein 25-like isoform X2 [Cucumis m... [more]
BLAST of CsaV3_7G002190 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G12050.17.9e-5061.39Predicted AT-hook DNA-binding family protein[more]
AT4G35390.11.3e-4969.66AT-hook protein of GA feedback 1[more]
AT4G22810.18.7e-4962.50Predicted AT-hook DNA-binding family protein[more]
AT2G45430.12.5e-4858.72AT-hook motif nuclear-localized protein 22[more]
AT2G35270.12.8e-4763.23Predicted AT-hook DNA-binding family protein[more]
BLAST of CsaV3_7G002190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SZ70|AHL26_ARATH1.4e-4861.39AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|Q6DBQ1|AHL25_ARATH2.4e-4869.66AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O49662|AHL24_ARATH1.6e-4762.50AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O22130|AHL22_ARATH4.6e-4758.72AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O82166|AHL21_ARATH5.1e-4663.23AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
BLAST of CsaV3_7G002190 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K104|A0A0A0K104_CUCSA1.8e-117100.00AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_7G0294... [more]
tr|A0A1S3BQW4|A0A1S3BQW4_CUCME5.4e-9372.28AT-hook motif nuclear-localized protein 25-like isoform X1 OS=Cucumis melo OX=36... [more]
tr|A0A1S4DYJ1|A0A1S4DYJ1_CUCME5.9e-8474.79AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103492556 ... [more]
tr|A0A1S3BRN2|A0A1S3BRN2_CUCME7.8e-8474.79AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103492556 ... [more]
tr|A0A2P4MVU6|A0A2P4MVU6_QUESU1.3e-6263.11AT-hook motif nuclear-localized protein OS=Quercus suber OX=58331 GN=CFP56_26338... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005488 binding
molecular_function GO:0003680 AT DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002190.1CsaV3_7G002190.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005175PPC domainPFAMPF03479DUF296coord: 81..193
e-value: 9.0E-24
score: 83.8
IPR005175PPC domainPROSITEPS51742PPCcoord: 77..213
score: 32.318
IPR005175PPC domainCDDcd11378DUF296coord: 81..167
e-value: 1.55777E-21
score: 85.715
NoneNo IPR availableGENE3DG3DSA:3.30.1330.80coord: 80..206
e-value: 2.3E-12
score: 48.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..254
NoneNo IPR availablePANTHERPTHR31100:SF16AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 25coord: 37..230
NoneNo IPR availablePANTHERPTHR31100FAMILY NOT NAMEDcoord: 37..230
NoneNo IPR availableSUPERFAMILYSSF117856AF0104/ALDC/Ptd012-likecoord: 77..208

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002190CSPI07G02320Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002190Cucsa.099950Cucumber (Gy14) v1cgycucB116
CsaV3_7G002190CsGy7G002030Cucumber (Gy14) v2cgybcucB348
CsaV3_7G002190Cla015722Watermelon (97103) v1cucwmB634
CsaV3_7G002190MELO3C015690Melon (DHL92) v3.5.1cucmeB555
CsaV3_7G002190ClCG02G003210Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002190Lsi11G013130Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002190MELO3C015690.2Melon (DHL92) v3.6.1cucmedB543
CsaV3_7G002190Cla97C02G029750Watermelon (97103) v2cucwmbB549
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002190Cucumber (Chinese Long) v3cuccucB187
CsaV3_7G002190Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G002190Silver-seed gourdcarcucB0232
CsaV3_7G002190Silver-seed gourdcarcucB0386
CsaV3_7G002190Silver-seed gourdcarcucB1114
CsaV3_7G002190Cucumber (Gy14) v2cgybcucB196
CsaV3_7G002190Cucumber (Gy14) v2cgybcucB306
CsaV3_7G002190Cucumber (Gy14) v1cgycucB160
CsaV3_7G002190Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002190Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002190Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G002190Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G002190Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002190Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002190Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G002190Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002190Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002190Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002190Wild cucumber (PI 183967)cpicucB375
CsaV3_7G002190Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002190Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G002190Melon (DHL92) v3.6.1cucmedB521
CsaV3_7G002190Watermelon (Charleston Gray)cucwcgB576
CsaV3_7G002190Watermelon (97103) v2cucwmbB554
CsaV3_7G002190Wax gourdcucwgoB695