CsaV3_7G001440 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G001440
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 1252557 .. 1253265 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGTATGAATCAAATAAGAGAATTCAGTAAGATATAATTCTTTTCTCATCACTTGGCTTTTGTAAATGTATCAAATAAGAGAATTCAACAAAAGCTGTAAACTACAAAACTCGTGTACATTAATAGATTTCCTAGTTTGATTGCCAAGGCCTATTTACTTCTACTCTCCACCTAGATTAGAATGAGGACATGTGAATGAAAATTGTAGTAGAATTTGAACACATAACAACCAAACAGTAACTTAAAGAGAGAGAGAAGAAGAACAAAGTGGAGCCTGCCTGATCTTTAAAATAAATAATGATTAAAGAATATCGAACGCTGTTCTTATTGGGGTACAATAATTCACACTAATTTACGAGCAACCTCTTTAAGGAAAAGAACTACTAAAATTTCTATCTTCCTCACTAATACATTTTTCTTTTTGCCTCTTTCTTCCTCTCATTTTTTTGTTCAAATTACAACAGAAGTATACAGCAACGAAGAAGAGAGGAAAACCTGGCTGAAATTTTCCAGACCAGGTTAGCATCACAGCAGAATATTCCTCTCCTTTCTCTTTCTACTGTATTATAATTTATTGTTAATTTGTAGTATTAAACCAAAGGAAGAAAGCAAAATACAAGATGAAGAAAACACCGATAAACGTGCTAAGAAAAATACTGGAGACTGGTGCAAATGGGATTTTTGCTAACCCAGAGCTCAACTGA

mRNA sequence

ATGAATGGTATGAATCAAATAAGAGAATTCAAAGTATACAGCAACGAAGAAGAGAGGAAAACCTGGCTGAAATTTTCCAGACCAGTATTAAACCAAAGGAAGAAAGCAAAATACAAGATGAAGAAAACACCGATAAACGTGCTAAGAAAAATACTGGAGACTGGTGCAAATGGGATTTTTGCTAACCCAGAGCTCAACTGA

Coding sequence (CDS)

ATGAATGGTATGAATCAAATAAGAGAATTCAAAGTATACAGCAACGAAGAAGAGAGGAAAACCTGGCTGAAATTTTCCAGACCAGTATTAAACCAAAGGAAGAAAGCAAAATACAAGATGAAGAAAACACCGATAAACGTGCTAAGAAAAATACTGGAGACTGGTGCAAATGGGATTTTTGCTAACCCAGAGCTCAACTGA

Protein sequence

MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIFANPELN
Homology
[Close]
BLAST of CsaV3_7G001440 vs. NCBI nr
Match: KGN43294.1 (hypothetical protein Csa_7G018760 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF 60
          MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF
Sbjct: 1  MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF 60

Query: 61 ANPELN 67
          ANPELN
Sbjct: 61 ANPELN 66

[Close]
BLAST of CsaV3_7G001440 vs. TrEMBL
Match: tr|A0A0A0K2N9|A0A0A0K2N9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018760 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.3e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF 60
          MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF
Sbjct: 1  MNGMNQIREFKVYSNEEERKTWLKFSRPVLNQRKKAKYKMKKTPINVLRKILETGANGIF 60

Query: 61 ANPELN 67
          ANPELN
Sbjct: 61 ANPELN 66

The following BLAST results are available for this feature:
BLAST of CsaV3_7G001440 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43294.11.4e-28100.00hypothetical protein Csa_7G018760 [Cucumis sativus][more]
BLAST of CsaV3_7G001440 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G001440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G001440 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K2N9|A0A0A0K2N9_CUCSA9.3e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018760 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G001440.1CsaV3_7G001440.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G001440Silver-seed gourdcarcucB0386
CsaV3_7G001440Silver-seed gourdcarcucB0851
CsaV3_7G001440Silver-seed gourdcarcucB1096
CsaV3_7G001440Silver-seed gourdcarcucB1111
CsaV3_7G001440Cucumber (Gy14) v2cgybcucB348
CsaV3_7G001440Cucumber (Gy14) v1cgycucB116
CsaV3_7G001440Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G001440Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G001440Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G001440Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G001440Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G001440Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G001440Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G001440Cucurbita moschata (Rifu)cmocucB0753
CsaV3_7G001440Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G001440Cucurbita pepo (Zucchini)cpecucB0368
CsaV3_7G001440Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G001440Cucurbita pepo (Zucchini)cpecucB0952
CsaV3_7G001440Wild cucumber (PI 183967)cpicucB415
CsaV3_7G001440Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G001440Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G001440Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G001440Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G001440Watermelon (Charleston Gray)cucwcgB578
CsaV3_7G001440Watermelon (97103) v1cucwmB634
CsaV3_7G001440Watermelon (97103) v2cucwmbB549
CsaV3_7G001440Watermelon (97103) v2cucwmbB555
CsaV3_7G001440Wax gourdcucwgoB695