CsaV3_7G001020 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G001020
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 912757 .. 913012 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGTTCGCCACGTGTCGACATGGAGATTTGAGTTTGTACTTGCGTGGATGCGGTGGCATGGTCCGAACCGACCAAACGGGCAGTTGGGCCCCGGTTTTTGGAGCCGGGTGGCACGTGCACCCCACGCTTTTTTTCGTTTGGAAAAGTTAATAGCTTTCGTTTATCTTTTCTTTTCTTTTCTTTTCCTTCTTTTTTCTATATATGTAGGGCCCACGCGTTGTGTGGTGTGGGTCCCGTTTTCAGTGATTAG

mRNA sequence

ATGGCGATGTTCGCCACGTGTCGACATGGAGATTTGAGTTTGTACTTGCGTGGATGCGGTGGCATGGTCCGAACCGACCAAACGGGCAGTTGGGCCCCGGTTTTTGGAGCCGGGGCCCACGCGTTGTGTGGTGTGGGTCCCGTTTTCAGTGATTAG

Coding sequence (CDS)

ATGGCGATGTTCGCCACGTGTCGACATGGAGATTTGAGTTTGTACTTGCGTGGATGCGGTGGCATGGTCCGAACCGACCAAACGGGCAGTTGGGCCCCGGTTTTTGGAGCCGGGGCCCACGCGTTGTGTGGTGTGGGTCCCGTTTTCAGTGATTAG

Protein sequence

MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD
BLAST of CsaV3_7G001020 vs. NCBI nr
Match: KGN43253.1 (hypothetical protein Csa_7G012420 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD 52
          MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD
Sbjct: 1  MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD 51

BLAST of CsaV3_7G001020 vs. TrEMBL
Match: tr|A0A0A0K1B0|A0A0A0K1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012420 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.7e-23
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD 52
          MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD
Sbjct: 1  MAMFATCRHGDLSLYLRGCGGMVRTDQTGSWAPVFGAGAHALCGVGPVFSD 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43253.11.2e-22100.00hypothetical protein Csa_7G012420 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K1B0|A0A0A0K1B0_CUCSA7.7e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012420 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G001020.1CsaV3_7G001020.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G001020CSPI07G00980Wild cucumber (PI 183967)cpicucB415
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G001020Wax gourdcucwgoB695
CsaV3_7G001020Wax gourdcucwgoB706
CsaV3_7G001020Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G001020Silver-seed gourdcarcucB0347
CsaV3_7G001020Silver-seed gourdcarcucB0386
CsaV3_7G001020Silver-seed gourdcarcucB0851
CsaV3_7G001020Silver-seed gourdcarcucB1069
CsaV3_7G001020Cucumber (Gy14) v2cgybcucB093
CsaV3_7G001020Cucumber (Gy14) v2cgybcucB348
CsaV3_7G001020Cucumber (Gy14) v1cgycucB352
CsaV3_7G001020Cucumber (Gy14) v1cgycucB562
CsaV3_7G001020Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G001020Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G001020Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G001020Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G001020Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G001020Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G001020Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G001020Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G001020Cucurbita moschata (Rifu)cmocucB0753
CsaV3_7G001020Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G001020Cucurbita pepo (Zucchini)cpecucB0368
CsaV3_7G001020Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G001020Cucurbita pepo (Zucchini)cpecucB0952
CsaV3_7G001020Wild cucumber (PI 183967)cpicucB117
CsaV3_7G001020Bottle gourd (USVL1VR-Ls)cuclsiB523
CsaV3_7G001020Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G001020Melon (DHL92) v3.5.1cucmeB533
CsaV3_7G001020Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G001020Melon (DHL92) v3.6.1cucmedB520
CsaV3_7G001020Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G001020Watermelon (Charleston Gray)cucwcgB565
CsaV3_7G001020Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G001020Watermelon (97103) v1cucwmB628
CsaV3_7G001020Watermelon (97103) v1cucwmB634
CsaV3_7G001020Watermelon (97103) v2cucwmbB543
CsaV3_7G001020Watermelon (97103) v2cucwmbB549