CsaV3_7G000990 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G000990
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr7 : 905697 .. 905990 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATATTGTTCGATCCATCAATTGGAGCCTTTCACTTTTGCCATACTTTCATTCATTAAAACTCTGCCATGCTCTACTCAATTCCACTTCTCAACCTTCGAAGATGTGTATGGAACCCGCAGTACCACGTTTGAAGAAGCTTCACCATTTCGAGTACCTCAAATGGGTCAAGAGAAAATCGATAATGAGAAGATATTCAGACATTGCAGTTGCATGGCAATACAACACTTATTGATCGCGGGGTGCACCACCCCCACAGGCATGGGCGGGATGAAGATGTTGACATTTTGA

mRNA sequence

ATGAAATATTGTTCGATCCATCAATTGGAGCCTTTCACTTTTGCCATACTTTCATTCATTAAAACTCTGCCATGCTCTACTCAATTCCACTTCTCAACCTTCGAAGATGTGTATGGAACCCGCAGTACCACGTTTGAAGAAGCTTCACCATTTCGAGTACCTCAAATGGGTCAAGAGAAAATCGATAATGAGAAGATATTCAGACATTGCAGTTGCATGGCAATACAACACTTATTGATCGCGGGGTGCACCACCCCCACAGGCATGGGCGGGATGAAGATGTTGACATTTTGA

Coding sequence (CDS)

ATGAAATATTGTTCGATCCATCAATTGGAGCCTTTCACTTTTGCCATACTTTCATTCATTAAAACTCTGCCATGCTCTACTCAATTCCACTTCTCAACCTTCGAAGATGTGTATGGAACCCGCAGTACCACGTTTGAAGAAGCTTCACCATTTCGAGTACCTCAAATGGGTCAAGAGAAAATCGATAATGAGAAGATATTCAGACATTGCAGTTGCATGGCAATACAACACTTATTGATCGCGGGGTGCACCACCCCCACAGGCATGGGCGGGATGAAGATGTTGACATTTTGA

Protein sequence

MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEKIDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF
Homology
[Close]
BLAST of CsaV3_7G000990 vs. NCBI nr
Match: KGN43250.1 (hypothetical protein Csa_7G012390 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 4.3e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK 60
          MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK
Sbjct: 1  MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK 60

Query: 61 IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF 98
          IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF
Sbjct: 61 IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF 97

[Close]
BLAST of CsaV3_7G000990 vs. TrEMBL
Match: tr|A0A0A0K0L3|A0A0A0K0L3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012390 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.8e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 

Query: 1  MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK 60
          MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK
Sbjct: 1  MKYCSIHQLEPFTFAILSFIKTLPCSTQFHFSTFEDVYGTRSTTFEEASPFRVPQMGQEK 60

Query: 61 IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF 98
          IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF
Sbjct: 61 IDNEKIFRHCSCMAIQHLLIAGCTTPTGMGGMKMLTF 97

The following BLAST results are available for this feature:
BLAST of CsaV3_7G000990 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43250.14.3e-50100.00hypothetical protein Csa_7G012390 [Cucumis sativus][more]
BLAST of CsaV3_7G000990 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_7G000990 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K0L3|A0A0A0K0L3_CUCSA2.8e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G012390 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G000990.1CsaV3_7G000990.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G000990Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G000990Silver-seed gourdcarcucB0347
CsaV3_7G000990Silver-seed gourdcarcucB0386
CsaV3_7G000990Silver-seed gourdcarcucB0851
CsaV3_7G000990Silver-seed gourdcarcucB1069
CsaV3_7G000990Cucumber (Gy14) v2cgybcucB093
CsaV3_7G000990Cucumber (Gy14) v2cgybcucB348
CsaV3_7G000990Cucumber (Gy14) v1cgycucB352
CsaV3_7G000990Cucumber (Gy14) v1cgycucB562
CsaV3_7G000990Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G000990Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G000990Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G000990Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G000990Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G000990Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G000990Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G000990Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G000990Cucurbita moschata (Rifu)cmocucB0753
CsaV3_7G000990Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G000990Cucurbita pepo (Zucchini)cpecucB0368
CsaV3_7G000990Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G000990Cucurbita pepo (Zucchini)cpecucB0952
CsaV3_7G000990Wild cucumber (PI 183967)cpicucB117
CsaV3_7G000990Wild cucumber (PI 183967)cpicucB415
CsaV3_7G000990Bottle gourd (USVL1VR-Ls)cuclsiB523
CsaV3_7G000990Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G000990Melon (DHL92) v3.5.1cucmeB533
CsaV3_7G000990Melon (DHL92) v3.5.1cucmeB549
CsaV3_7G000990Melon (DHL92) v3.6.1cucmedB520
CsaV3_7G000990Melon (DHL92) v3.6.1cucmedB537
CsaV3_7G000990Watermelon (Charleston Gray)cucwcgB565
CsaV3_7G000990Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G000990Watermelon (97103) v1cucwmB628
CsaV3_7G000990Watermelon (97103) v1cucwmB634
CsaV3_7G000990Watermelon (97103) v2cucwmbB543
CsaV3_7G000990Watermelon (97103) v2cucwmbB549
CsaV3_7G000990Wax gourdcucwgoB695
CsaV3_7G000990Wax gourdcucwgoB706